Chiloscyllium punctatum (brownbanded bambooshark): 140467209
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Entry
140467209 CDS
T11285
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140467209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140467209
03021 Transcription machinery [BR:
cpun03021
]
140467209
03036 Chromosome and associated proteins [BR:
cpun03036
]
140467209
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Helix-turn-helix
ARID
140467209
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140467209
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
140467209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
140467209
NCBI-ProteinID:
XP_072419520
LinkDB
All DBs
Position
45:complement(20569480..20826971)
Genome browser
AA seq
1678 aa
AA seq
DB search
MAKTPSKSGGLRTGRSFLDELRHFHRSKGTSFRKIPIIGGRELDLSALYSRVTSLGGFAK
VTDKGLWTDLLEEFNFPRGCANAAFALKQYYLRYLESYEKLHHFGEDDEVLTPTNSRPQG
VVSGVHLFYNRHQHIIPESVRRGYGLFTEFTTISDYNKVVLSLLSGLPNEVDFAINVCTL
MSHGNKQVLQMEKDPKVVTLLLAHAGIFDDSPGTYLNVYESEWKVKSGRDFIKFWKETVD
DHEVRELIGDKSQKSKEAASDDRWDSVLFHPPQKLGIDDLEGQRVLQIAVIIHNLSLEEG
NAKLLANRTCLRFLLLCAHNRHVSLKQMGLDTLGNVMAELQLDPIDFQSTQVIFHTITKC
LFSSDKWFRIRGMEILANLCKIEENVDIICECVEQEAYREIVNHLSLQDILLLLASLEAL
YMLSSLGEVTCTKIIKVERSIDQLVCLVSVDMQNFPPDALAAVKLVEQQSILQQPTPETT
RSVTTENVSNQSTPVTASRPLGVPSASLLEADSETFTCQWLNANFEESADSSIYRVDLYS
EYLSLCSKLGSSGILTSTGFTKCLRLTFPNHTIKKIEDAGANGQSQFHVVGIKRRVVPLP
VGTFQQEQQTPNNSFVTVKASSASSTTVNSIAVGMTGSNPTVQMHRALTSTSQPVSQILY
TTQTQNISQLPPGISTPAQQHQYCTIASKVPIATGGIQASAIQATAVHPNFHSAVTTVVP
GNTVMQMAATKVTTAVQLPTVTTSVHLPHVAVTHQSLAGHQSVCSTTTVPVLRQTLPNAQ
FASRIHPITSAAIVSQGQLIQPTTAQPVQVHLQYTAAPTAVVSATAVQLPSSQPFTIGSH
NAVSSQTFQNISPTPLTIVSNSTQQQAQQSVQVIVGHQGQVYPASFHQIVLTNQGGISSA
QLPPPTLVNTSTCGPVLSVQQSPIQVHVQQPSVGSTQCSTSETSVIKQLLLPKPPPHSQA
GKILLPVPQVSSSVTRAQSPQVVYQMMANTVPSGSVQTQSQLVVSQSNLQILQPHGGLQT
VQIIPGQFISTTSPSTILQGSPLNQQVTVTVVPNTNLTNTHVTQVNTNPVNSISGEHSAK
PVISTHVIQSSHVPFNQSNTKIDEFEGEKNIGQKAEDATKMLSSQPQEQTIGLIENSFLG
NAYSASNGHLNGKVDQTGMLLNGESRKENPSSGMNHCGFMEKASAFQDSKAGSGANLTNG
DQILEKPGAAEMKNVLKRPLLNGDSDFAKGDRSHIGKDVPNEKSVTPNHLGNGEILNQEH
QDAKCHPDGENSQSGKMCNGPSSISNVKSHAHTTVIVPNPTVQQAHRNSVLTSGTAAVTF
NVTLPQSQHNGNIVVQSNPIESSQMIICQSNSTLSASKLSPSEAQSCRQAIKRPGDDTAG
VSMAGIPNKVGVRIMTVSDPTKAGSNTMMVAVPAGATINTATIAGVPKVGSPAPLSSQQT
VTQHLHSQLSPTVEQYTGPQVPLSPAETESTRKPSQSFMCLWKNCKRWFETPSQVFYHAA
TEHGGKDVYQGQCMWEGCEPLPRQRLSFITHLQDKHCSRETLLIGLKRLEQKAQTSTSQT
AVRQSPSDGTAPTPKSHKALVNHPSAALMALRKGSRNLNFRNYLDEKEGPIVKHIRLTSA
LILKNVARYSELGRMLLKRHENHLSVLAISGMEASTALAKCLYELNSHEQSESTENKR
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaactccgagtaaaagcggcggtttgaggactggcaggagtttcctggatgag
ctgcggcactttcacaggagtaaagggacatcctttagaaagatcccaataatcggaggg
agagagttggatttgagtgctttatacagcagagtcacctcactcgggggattcgccaag
gtaacagataagggtctgtggacagatcttttggaagaattcaactttccaagaggttgc
gccaatgcagcttttgctttgaagcagtactacctgaggtacctggagagttatgagaag
ttgcatcattttggtgaggatgatgaagtacttaccccgaccaattctcgaccacagggt
gtcgtctctggggttcatttgttttataatcgacatcagcacatcatcccagaaagtgta
cgtcggggttatgggctttttacagaatttaccacaatcagtgattataataaagtggtg
ctgtctttactttcgggacttccaaatgaagtggactttgcaatcaacgtatgtacactt
atgtcacatgggaacaaacaagtactgcaaatggaaaaagacccaaaggtggttacactg
ctgcttgcacatgctgggatttttgatgatagtccagggacctacttgaatgtatatgaa
tcagaatggaaagttaaatctggaagagacttcataaagttttggaaagagaccgttgac
gaccatgaagtacgagagcttattggagacaaaagtcaaaaatctaaagaagctgctagc
gatgatcgatgggactctgtcttgttccaccctccacagaaattgggcattgatgacctg
gaagggcaaagggtcctgcagatagctgttattatccacaatctgtccttggaagaagga
aatgccaagctgctagctaaccgaacgtgcctgcgctttctgctgttgtgtgctcacaat
agacacgtctcacttaagcaaatggggctggacacactgggaaatgttatggcagagctg
cagttggatccaattgacttccaaagtacccaggtgatttttcacaccattacaaaatgt
cttttctcttcggataagtggtttcgaattagaggaatggaaatcttagctaatctttgt
aaaattgaagagaatgtcgatatcatctgtgagtgtgtggaacaggaggcctatcgagag
attgtgaaccatttgtctctccaagatatcttgctgttattggccagtctggaagctctg
tatatgttatcgagtctgggagaggtgacttgcaccaagattatcaaagtggagagaagt
attgatcagcttgtttgcctagtttctgtggacatgcagaactttcctcctgatgcacta
gctgcagtcaagttagtagaacagcagagcattcttcagcagccaacacctgagaccact
cgatcagtcacaacagaaaatgtttcaaatcagagcacccctgtaacagcatcaaggcct
cttggagttccctctgccagcttgttggaagcagatagtgagacatttacatgccagtgg
ttgaatgccaactttgaagaaagtgcagatagttcaatctaccgagtagacctatactct
gagtacctgtccctctgcagcaaacttgggagcagtggtattctaacatctacagggttc
accaaatgtctccgattgacttttcctaaccacacaataaagaagattgaagatgctggt
gctaatgggcaatcacaatttcatgtggttgggatcaagcgtagagttgtacctcttcct
gttggaacatttcaacaagaacagcaaacaccaaataattcctttgtcacagtgaaagca
agctctgcttccagtacaacagtgaattccattgctgttggaatgacgggatctaaccca
actgttcaaatgcacagagccctcacatctacaagtcaaccagtctctcaaatcctctac
acaactcagacccagaacataagccaactgcctcctggaataagtactcctgcccagcaa
catcaatactgtacaattgcaagcaaggtacccatagccactggagggatacaagctagt
gctatccaagcaactgctgttcatccgaatttccattctgcagtaacaacagttgttcct
gggaatactgtaatgcaaatggcagcaaccaaagtcaccacagcagtgcagctgcccact
gtgaccacctctgttcatcttcctcatgttgcagttactcaccaatcccttgctggacat
cagtctgtctgttcaactacaacagttcctgttctccgtcaaacactgcctaatgcacag
tttgcttcacgaatacaccctattacaagtgctgccatagtttctcaaggacagcttatc
caacctaccactgcccaacctgtgcaggtgcatcttcagtacacggcagctcccactgct
gttgtatctgccactgctgtccagctgccaagcagtcagccttttactataggcagccac
aacgctgtttcttctcagacgtttcaaaatattagtccaacaccattgactattgtcagt
aattccacccaacaacaagcccagcaaagtgtccaagtgatagttggacatcaaggtcaa
gtttaccctgctagttttcatcagattgtgctaacaaatcaaggtggaatttcttcagcc
caattgccaccacccaccctagtgaacaccagtacctgtgggccagtgctttctgttcaa
cagtctcccattcaagttcatgttcaacagccttccgtaggaagcactcaatgcagtact
agtgaaaccagtgtaattaaacagttactacttccaaaaccgccacctcattcccaagca
ggtaaaatcctacttcctgtccctcaagtgtcatcttcagttaccagggctcaaagtcca
caggttgtttatcaaatgatggccaacactgtacctagcggtagtgttcaaacccagtct
cagctggttgtaagccagtcaaacttacaaatcctacagccacacggaggcctacaaact
gtacaaattattcctggccaatttatttctaccaccagccccagcactattctccaggga
tcacctctcaaccaacaagttactgtcactgttgtaccgaataccaatttaaccaacaca
catgtgacacaagtaaatacaaatcctgtgaacagtatttctggagaacacagtgcaaag
ccagtcatcagtacccatgttatccagtcatcacatgttccattcaaccaaagcaacaca
aaaatcgatgagtttgaaggagagaaaaacattggtcagaaagctgaagatgctacaaaa
atgctcagttctcaacctcaagaacaaactattggactgatcgaaaattctttcttgggt
aatgcttacagtgcaagcaatggacacctaaatggaaaagttgatcagactgggatgcta
cttaatggggaaagtaggaaggagaaccccagctcagggatgaatcattgtggtttcatg
gaaaaagcatcagctttccaagactcaaaagctggcagtggagcaaacttgacaaatggg
gatcagattttagagaaacctggtgcagcagaaatgaaaaatgttttaaaaaggcctttg
ttgaatggagactctgattttgctaaaggtgatcgttcacacatagggaaggatgttcct
aatgagaaatctgtcacgcctaaccatttagggaatggcgagattcttaatcaagagcac
caggatgcaaagtgtcacccggatggtgagaatagtcaatcgggaaaaatgtgcaatgga
ccttcttcaatttccaatgtgaaatcacatgcacacactacagtaatagtaccaaatcct
acagttcagcaagcacacaggaactctgtattaacaagtggaactgcagcagtcactttt
aatgttactttgcctcagtctcaacataatggcaatattgttgtacagtccaatcctata
gaatcttcacaaatgatcatctgtcagagcaacagtacactttctgcttcaaagctttcc
ccaagcgaagctcagtcatgtcgacaagccatcaaaaggcctggtgatgacacagctggt
gtttccatggcgggtatcccaaataaagtaggagtgaggattatgaccgttagcgatcca
acaaaagctgggagcaacaccatgatggtagctgtccctgctggagcaaccattaataca
gcaacaatagcaggggttcctaaagtgggttctcctgctccgttgtccagtcagcagaca
gtaacccaacacctgcattcacaactttccccaacagtggagcagtatacagggccccag
gtaccactgtcacctgcagaaacagagtctaccaggaaacccagccagagtttcatgtgt
ctttggaaaaattgtaagaggtggtttgagacaccttcccaagtgttttaccatgcagct
actgagcatggtggaaaagatgtgtatcagggtcaatgtatgtgggagggctgtgagcca
cttcctcgacaaaggctttcattcatcacacacctgcaggacaaacactgttcaagagaa
acgctgcttattggactgaagagattagagcagaaagcacaaacaagcacctctcaaact
gcagtaaggcagtctccatcagatggtacagctccgacacccaagtctcacaaggccttg
gtcaatcaccctagtgctgcgctaatggctctgaggaaaggctcccgcaatcttaatttt
agaaattacttggatgagaaagaagggccaattgtaaagcatattcgtttgacttctgcc
ttaattttgaagaatgttgctagatactcagaacttgggcgaatgttgctgaagcggcat
gagaaccacctttcagtactggccataagtggtatggaggcttccactgcacttgctaaa
tgcctttatgaactcaactcgcatgaacaatcagagtcaacagaaaacaaacgctga
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integrated database retrieval system
