Chiloscyllium punctatum (brownbanded bambooshark): 140467456
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Entry
140467456 CDS
T11285
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
140467456 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140467456 (nfasca)
Cell adhesion molecules [BR:
cpun04515
]
Immunoglobulin superfamily
L1 family
140467456 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
Pur_ac_phosph_N
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_6
DUF4998
Herpes_gE_N
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
140467456
NCBI-ProteinID:
XP_072419937
LinkDB
All DBs
Position
45:56531218..56838023
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AA seq
1349 aa
AA seq
DB search
MLPRDRFLLHTGLVFIVSLCHLVTAIEVPLDPSLQRELAQPPTINKQSPKDYIVDPRDNV
VIYCEGKGNPIPAFSWTRNGKFFNVAKDSRVSMRSRSGTLTMDFRYSGRAEDYEGEYQCS
ARNDYGTALSHKIFLRVSKAPLWRKEVLDPFQVQEGAPLILPCQPPAGLPPPVIFWMDSM
MESIPQNKRVSQGLNGDLYFSNVVRSDARFDYICNARFLFTHTIQQKNPITIKVITMDTS
YESVSTILNETELSGARPITEQIPKFMSPTGTSSSRIILRGEDLLLECIASGIPTPDIIW
YKKGGELPWPKVRIENYNKTLRITDVSEENSGEYFCLASNKMGSIRHTITVRVKAAPYWL
NEPQNLVLAPGEYGRLVCQANGNPKPNIQWLMNGEPIEKVRQSPGREIDGDTIIFREAQI
GSSAVYQCNASNEHGYLLANAFVSILDVQPRILTRRNQIVKVIENNRTRLDCQFFGSPIP
TLRWFKDGQGNNLYGGNYIIHDNGTLELRRARKVDEGTYTCVATNILGKAENRVRLEVKD
PTRIIRAPESITVKRSLAAKFECKVRHDPTLRVTVTWLKDDKVLYLPWRMKKDEDSLTII
NVSERDEGIYTCVASTELDSDSAKARLTVLVVPSTQITPLAAVLKDRPDPPRDLELTDPA
DRSIRLTWIPGDDNNSPITEFIVQFEENRFQPRKWHNLTRISGSINSAVLQLSPYVNYQF
RVIAVNEVGEGAPSLPSERYQTTGTAPELNPSDVRGAGISKSSMQISWTPLNGTQISGPN
LKYIVSWRQKDVGGEWSTVTVPRSSYIVSPTPFFTPYEIKVQAVNDFGLGPEPRIVIGYS
GEDFPIAAPTALSGRIINSTAVLLQWRALPPDTVQGYLIGHRIQYWNEGSLLKTNQYRSR
VQVTESPSQRLRAIVSGLQPYHAYKFQVAAVNGRGRGPWSEEFAINTTEGVPGKPSYLRI
RQPDLESITLQWGPPRDPNGILIGYVIMYHPLTGSRSRRNATIPRLGPDVTTYKLERVDA
NIKYRFYVFAQTRHGLGEAIVLDSPDFENEVTPTPEIAKTIGVVSRFIPIPTIPAATTTL
TTITTTTTTTSVAPPTVTITETAQPAVTGTHVYVEALGRIWNLTTSAGNDSVNITWSHTF
PREMAQFTVEYIHSNGTVKQEHIQTGQNSVRLLGLVPGTLYKLRVFSTLFPTVTSNTSTI
ETSPAFTNSHVDIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVKTTEENRPSQD
DNGYLSLESDNEDSKKPQGSQSSVDGTVKQEESDDSIVIYGDGDGNSRFGEDGSFIGQYT
VKKDKEETEGNDSSEATSPVNPAYSLAQM
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaagggataggtttcttctgcacactggcttggtgtttattgtgtctctgtgt
cacctggttacagccattgaagtcccccttgatccaagccttcagagagagttggcccag
cctccaaccattaacaagcagagtccaaaggattatatcgtagacccacgagataacgtg
gttatttactgcgaagggaaggggaacccaattccagccttctcgtggactcgcaatggg
aagttcttcaatgttgcaaaagattccagagtgtcgatgcgatcgcggtcaggcaccctc
acaatggacttccgttacagcggccgggcggaggactatgagggggaataccagtgctca
gccagaaatgactatggaactgcactctcccacaaaatattccttcgagtctccaaggca
cccctgtggcgtaaggaggtcttagaccctttccaggtacaggaaggagcacccttgatt
cttccatgtcaacctcctgctggacttccccctcctgtcatcttctggatggacagcatg
atggaatcgatccctcagaataaacgtgtgtctcagggcctgaacggagacctctacttc
tccaacgtggtgcgtagtgatgcacgctttgactacatctgtaatgcccggttcctcttc
acacacaccattcaacagaaaaaccccatcaccatcaaggtgataaccatggataccagt
tatgaatctgtgtcaactattctgaatgaaactgaattgtctggtgctcggccaatcaca
gaacagattccaaagttcatgtcaccgacagggacgtccagcagcagaattattctccga
ggggaagacctgttactggagtgcatcgcttcaggaatacccacaccggatattatttgg
tacaagaaaggtggtgaactgccttggccaaaggtgcgaattgaaaattacaacaagacg
ttgaggatcactgacgtttctgaggagaactcgggcgagtatttttgcttagcatccaat
aaaatgggaagcatacggcacacaatcacagtgagagtgaaagctgctccatattggctg
aatgagccgcagaatttggtactggctcctggggaatatggcagattggtgtgtcaagcc
aatggaaaccccaagcccaacatccagtggctgatgaacggggaacccatagaaaaggtc
cgtcagagtccaggccgtgaaattgatggtgatacgatcatcttccgagaggcacagata
ggaagcagtgctgtgtaccaatgcaatgcctcaaatgagcatggatacttactggccaat
gcatttgtcagcattctcgatgtgcaaccaagaatattgactcgacgaaaccaaattgtc
aaagtgatagaaaataaccgaacaaggctcgattgtcagttctttggttcaccaatcccc
accctgcgatggtttaaggatgggcagggcaataatctttatggaggaaactatatcatc
catgacaatgggactttggaattacgacgagcacggaaggttgatgagggaacctatacc
tgtgtagcaaccaacatactgggcaaggctgagaacagggtgcgactggaggtcaaagac
cctacaaggatcatcagggctccagaatctatcacagtgaagaggtcacttgctgcaaag
tttgaatgtaaagtgagacatgatcccacattaagagtgacagtgacctggctcaaagac
gacaaagtcctgtatttgccttggaggatgaagaaagatgaggactctttaacaatcatt
aatgtgtctgaacgagatgaagggatctacacatgtgtcgctagcacagaactggacagt
gactcagctaaggcacgcctcactgttctcgttgtcccttctacccaaattaccccactt
gctgctgtgttgaaagatcgtcctgatcctccccgagatctggaactgacggatccagct
gatcgaagtataagattgacatggattcctggcgatgacaacaacagtccaattacagag
ttcattgtgcagtttgaagagaacaggtttcagccgagaaagtggcacaatttgacccga
atctcaggcagcatcaactctgctgtattgcagctctctccatatgttaactaccagttc
cgggtgatagcggtgaatgaagttggagaaggtgcccccagtttgccttctgaacgttat
caaacaactggaacagctccagaactcaatccatctgatgttagaggggcaggaatatca
aaatcaagcatgcaaatcagttggacgcctctgaatggaacacaaatcagtggcccgaat
ctcaagtatatagtcagctggagacaaaaggatgtaggtggggagtggtcaacagtcacc
gttcccaggtccagttacatcgtctctccgactcccttctttacgccctacgagattaaa
gtgcaggcagtgaatgactttgggttaggtcccgaaccaagaattgtgattggatactcg
ggtgaagactttccgattgcagcacccactgcgctttctggaaggattattaacagcact
gctgttctactccagtggagggcactaccaccagacactgttcaaggatatctcattggc
cacagaattcaatattggaatgagggaagtctgctgaagaccaaccaatacaggtcacgt
gttcaggtcacagagtctcccagtcagcgtctgcgtgccattgtatcaggcttgcaacca
tatcatgcctataagtttcaggtggcagcagtcaatggtcggggacgtggtccctggagt
gaggagtttgcaataaacaccacagaaggagttcctggaaaaccaagttacctcagaatc
aggcagccagatttggagagcattacgttacagtggggtcctccacgtgatccaaacgga
atcctcatcggctacgtgatcatgtaccacccattgactggttcaagatcaagacgcaat
gccaccattcccagactcgggcctgatgtgaccacctataagttggagagagttgacgca
aacataaagtacaggttttacgtcttcgctcaaacccgccacggactaggcgaagcgatt
gtgttggattcacctgactttgaaaatgaagtcacccctactcctgagattgcaaaaaca
atcggagtcgtgtcaagattcatacccatcccaactattcctgctgcgaccaccacctta
actaccataactaccacaaccactacaaccagcgttgctcccccgactgtcaccatcact
gagacagcccaaccagccgtcacgggcacccatgtttatgtggaagctctcggtaggata
tggaatctcactacgtcagcaggcaatgactccgtcaatatcacatggagtcacaccttc
ccaagggaaatggcacagtttacagttgaatacattcacagtaacggcacggtgaagcaa
gagcacatccaaacgggtcagaactctgtccggcttctgggtctagttcctgggactctg
tacaaactcagggtgttttccaccctgttcccgacagttaccagcaataccagcaccatt
gagaccagcccagcttttactaatagtcacgtggacatcgcaacgcagggctggttcatt
ggcctgatgtgtgctgtggcactccttgtgctgattctgctgattgtgtgcttcataaag
aggagcagaggaggcaaatatccagttaagacgacagaagaaaaccggccctcacaagat
gacaatggatacctatctctagaaagtgataatgaagacagcaagaagcctcaaggcagt
cagtcttcagtggatgggacagtgaagcaagaggagagcgatgacagcatagtcatctac
ggtgatggggatggcaattctcgctttggcgaggacggttccttcatcggtcagtacacg
gtcaaaaaggacaaagaggagaccgagggtaatgacagctccgaagctacgtctccagtc
aatcccgcctattccttggcacaaatgtga
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