Chiloscyllium punctatum (brownbanded bambooshark): 140468023
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Entry
140468023 CDS
T11285
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140468023 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140468023 (smarca4a)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140468023 (smarca4a)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140468023 (smarca4a)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140468023 (smarca4a)
Chromatin remodeling factors
BAF complex
140468023 (smarca4a)
PBAF complex
140468023 (smarca4a)
GBAF(ncBAF) complex
140468023 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
140468023
NCBI-ProteinID:
XP_072420273
LinkDB
All DBs
Position
46:49762552..49869470
Genome browser
AA seq
1637 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSAHSMMGPSPGPPSAGHSMTPQG
PGGYAAESIHQLHKAMESMHEKVMPDDPRYSQMKSISMRSGGHSGMAPPPSPMDQHSQGY
PSPLGCTEHAPSPVPANGPPSVPPMTSGPGGVPMDSGEPQTLGQQNRGPSPFNQGQLHQL
RAQIMAYKMLARGQPIPDHLQLAIQGKRPPPGMQQQISSLPPPSTPGTGAASGPAPGNYN
RPLGMGGSNMMPPGSAGVNQGMQCQPPGGPSKSWPEGPMANATAPTSTPQKLAPPQPTGR
PSPVPPAVPPAASPVMPPQTQSPGQPAQPAPMVQHHQKQNRITPIQKPRGLDPVELLQER
EYRLQARISHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTAL
ETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYH
RSVSGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDRRL
AYLLQQTDEYVANLTELVRQHKAAQAAKEKKKKKKKKKQENVDGLGSAVGPDGELLDETS
QMSDLPVKVIHVESGRILTGAEAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEEEEEDTT
DWRLLIMSEDRSRSGLLEEEEEEQANPPAQTPAPEEKKKIQDPDSEEVSELDARQIIENA
KQDVDDEYSAPLSSIHGLQSYYAVAHAVTERVDIQSTLLVNGLLKQYQVKGLEWLVSLYN
NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVS
RISYKGSPAARRAFVPLLRSGKFNVLLTTYEYIIKDKHVLAKIRWKYMIVDEGHRMKNHH
CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCNTFEQWFNAPFAMT
GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH
MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV
QGADLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFTYRSFKYLRLDGTT
KSEDRGMLLKTFNEPNSHYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA
HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI
LEHEEQDESEVVAAEVKGSEGHTEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEA
RNPKRKPRLMEEDELPNWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQW
LKAIEEGNLEEIEEEVRQKKARKRKRDVDPPLVMATTSTRSSRDKDDDEKKKKKRGRPPA
EKLSPNPPNLTKKMKKTVDAVIKYKDSSTGRQLSEVFIQLPSRKELPEYYELIRKPVDFR
KIKERIRNHKYRSLNDLERDVMLLCQNAQAYNLEGSLIYEDSIVLQSVFTSVRQKIEKEE
DSEDDSEEGEEEEEEGSESESRSVKVKIKLGRKEKSQDRVKGRKRSSRASKSKPVVSDDD
TEEEVDEERSGTGSEED
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcctgatcctccaatgggaggcacacctcgcccaggcccctcaccaggacct
ggaccttctcctggatcaatgctaggccccagtcctggaccctcacctggctctgcacac
agtatgatgggaccaagccctggtcccccatctgccggtcattccatgactccacagggg
cctggaggttatgctgcagaaagcattcatcaacttcataaggcaatggaatcaatgcat
gaaaaggtgatgcccgatgacccacgttacagccagatgaaatccattagcatgaggtca
ggaggacacagtggcatggcaccaccgcctagcccaatggaccagcattctcaaggttac
ccttctcctctgggatgtactgaacatgccccaagtccagtacctgctaacggccctcct
tcggtacctcctatgacttctggaccaggtggtgttccaatggatagcggggaacctcag
acactgggacagcaaaaccgtggaccctctcctttcaaccaagggcaactgcatcagctg
cgagcacagatcatggcatacaagatgctagcaagaggacaacccattcctgaccacttg
cagttggctatccaagggaagagaccaccgcctggaatgcagcagcagatatcatcacta
cctccgccctccacccctggaactggagcagcttcaggcccagctcctgggaattacaac
agaccacttggtatgggaggatctaacatgatgcctccaggatctgctggtgtcaatcag
ggaatgcaatgtcaacctcccggcggcccctcaaagtcctggcctgaaggtccaatggcc
aatgccactgcaccaactagcaccccccaaaagctggctccccctcaacccactggtcga
ccttccccagtgccaccagctgtgccccctgctgcctccccagtcatgccacctcagaca
cagtcaccaggccagccagctcagccagcccctatggtgcagcaccatcagaagcagaac
cggatcacccccattcagaaaccgcgagggttggacccagttgaacttctccaggaacgc
gagtatcggttgcaagcacgcatttcccatcggatccaagaactggaaaacctccctggc
tcattagcaggagaccttcgcacaaaagcaaccattgaactcaaggctctgcggctcctt
aatttccaaaggcagcttcggcaggaagtggtggtgtgcatgaggagggatacagccctc
gagacagcgctgaacgcaaaggcttataagcgcagcaagcggcagtcactccgcgaggca
cggatcactgaaaaacttgagaaacagcagaagattgagcaagagcgaaagcgcagacaa
aaacatcaggaatacctcaatagcattctgcagcatgcaaaggacttcaaggaatatcat
cggtcagtttctgggaagatgcagaaactgacaaaagcagtggccacgtaccatgcaaac
actgagcgtgagcaaaagaaggagaatgaacggattgagaaggagaggatgaggagactg
atggcagaagatgaagaaggctatcgaaaactgattgaccagaagaaggaccgacgcctg
gcgtatctgctgcagcaaactgatgaatacgttgccaatctgacagaactcgtccgacag
cacaaggcagcacaggctgcgaaagagaaaaagaagaaaaagaagaagaagaagcaggaa
aatgtggacggtttgggttctgctgttggccctgatggtgagctcttggatgagactagc
cagatgagcgacttaccagtgaaggtgattcatgtggaaagtggacggattctgactgga
gctgaggcaccaaaggctgggcagctggacacctggttggaaatgaatcccggctacgaa
gtggctccgcgttctgacagtgaagacagcggctctgaggaagaggaagaggatacgaca
gactggaggctgctaatcatgtcggaggacaggtctcgttcgggactgctggaagaggaa
gaggaggagcaggcaaacccaccagcacagactcctgcaccggaggagaagaagaaaatc
caggatccagacagtgaagaagtgtctgagctggacgcaaggcaaatcatagagaacgct
aagcaggacgtggatgatgagtacagcgcaccactatctagtatacatggtctgcagtcc
tattatgcagtagctcatgcagtgacggagagggtcgatattcagtctacgctgcttgtg
aacggtttactcaaacaataccaggtcaaaggtctggaatggcttgtttcgctgtacaat
aacaacctgaatggaatccttgctgatgagatgggcttgggaaagaccattcagacgatc
gcactcatcacttacctcatggagcataagcgcatcaatggacctttcctgatcatagta
cctctatcaacgctgtcaaactgggcctatgagtttgataagtgggcgccatcagtatca
cggatctcatataagggttctcctgcagctcgaagggcgtttgttcctctgcttagaagt
gggaagttcaatgtcctactcaccacttatgaatacatcatcaaagacaagcatgttctt
gccaagatccgttggaagtacatgatagtggatgaaggtcaccgtatgaagaaccaccac
tgtaagctaacacaggtgctgaatacgcattatgtggcaccacgccgcctgttgctcact
ggcactccactgcaaaacaagctgcctgagctgtgggcactcctcaacttcctgctgccc
actattttcaaaagctgcaacacgtttgagcaatggttcaacgcccccttcgccatgaca
ggagaaaaggtggatctaaatgaagaggagactattctgatcatcagacgtttgcacaag
gtcctccgccctttcctgttgaggcgattgaaaaaggaagttgaagctcagctgcctgag
aaggtggaatatgtcattaaatgtgacatgtcagctttgcagagagtactgtaccgccac
atgcaagccaagggagtgctgctgactgatggctcagagaaggataaaaagggcaaagga
ggcacaaagacactgatgaacaccattatgcaactgagaaagatttgcaaccacccatat
atgtttcagcacattgaggagtctttttcagaacacttaggattcactggaggcattgta
caaggggctgatctttaccgagcctcggggaagtttgaactgttggacaggattctcccc
aagctgcgagccaccaatcacagagtgttgctgttctgccagatgacctcactgatgacc
atcatggaagattacttcacataccgcagcttcaaataccttcgcctggacgggaccacc
aaatctgaggaccgtgggatgctgctgaagactttcaatgagcccaactcccattacttt
atcttcctgctcagcactcgggctggaggtctaggcctcaaccttcaggctgcagacact
gttgtcatttttgacagcgactggaatcctcaccaagacttacaagctcaagatcgtgct
catcgcattggacagcaaaatgaagtacgcgtgctgcgcctgtgcactgtgaacagtgtg
gaggaaaagattttagcagcagctaaatacaagctcaacgttgaccagaaggtcatccag
gctgggatgttcgatcagaagtcctccagccacgagaggcgggcatttcttcaggctata
ctcgaacatgaggagcaggatgaatctgaggttgtggcagcggaggtgaaaggatcggaa
ggacatactgaagaagatgaagttcccgatgatgagacagtgaatcaaatgatagccaga
cacgaagaggaattcgacctcttcatgcggatggatttggaccgccgtcgcgaagaggcc
agaaacccaaagcggaaaccacggttaatggaggaagatgagcttccaaactggatcttg
aaagatgatgctgaggtggaaaggctgacatgtgaggaggaagaggagaaaatgtttggc
cgaggctcgcggcagcgcaaggaggtggactacagcgactctttaaccgagaaacagtgg
ctcaaggccatagaagagggcaaccttgaggagattgaagaagaggttcgtcagaaaaaa
gcccgcaaacgaaagagagatgtcgacccaccgttggtcatggcaaccacgagtacgcgt
agcagccgggacaaggatgatgatgaaaagaagaaaaaaaagcgtgggcggccaccagct
gaaaaattatcaccaaaccccccaaacctcaccaaaaaaatgaagaaaactgtagatgca
gtgatcaaatacaaggacagcagtactggccgacagctcagtgaagtcttcattcaactt
ccatctcgcaaggagcttccagagtactatgaactcatccgcaaacctgtcgacttccgg
aagataaaggaacggatccgtaatcacaagtaccgtagcctcaatgacctagaaagagat
gtgatgttgctatgtcagaatgcacaggcctacaacctggagggatcactgatctatgag
gattcaattgtacttcagtctgtttttaccagcgtacgacagaaaatcgagaaggaggaa
gatagtgaagatgatagtgaggaaggagaggaggaggaggaggaaggatcggagtcagaa
tctcgttcagtgaaagtgaaaattaagctaggccgaaaggagaagagccaggatcgagtg
aaagggcgcaaacgctccagtcgtgcctctaaatccaaacctgttgtaagcgatgatgat
acagaggaggaagtggatgaggaacggtcaggaactggtagcgaagaagattaa
DBGET
integrated database retrieval system
