Chiloscyllium punctatum (brownbanded bambooshark): 140468767
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Entry
140468767 CDS
T11285
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140468767 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140468767 (efl1)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
Pre-60S particles
GTPases
140468767 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
Exonuc_VII_L
EFG_IV
Npun_R1517
Motif
Other DBs
NCBI-GeneID:
140468767
NCBI-ProteinID:
XP_072420895
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All DBs
Position
48:20081023..20346885
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AA seq
1142 aa
AA seq
DB search
MGHTNLENIVDLQKNTANIRNICIVAHVDHGKTTLADSLIASNGIISNRLAGKLRYMDSR
EDEQLRGITMKSSSISLHFTVDNQEYLINMIDSPGHVDFSSEVSTAVRVCDGAVVVVDVV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIIELKLTPFEAYIHLQKILEQVNAVTGSL
FTSKVLEERAEMGVTEKTRSDTKSSEHFYDWSAGLEETDDSHLYFAPDQGNVVFGSAIDG
WGFRIEQFAQMYSQKVGISAQVLLKTLWGDYYLNTKAKKIMKGAQSKGKKPLFVQLVLEN
IWSLYECVVVRRDKEKIDKIVNSLGLTILPRDSRHTDSKVHLNAICTQWLPISHAVLSMV
CNKLPSPLDIAAERVEKLMCVRSRRFDSLPPQIQALRQAFLECKSDETAPVIVFICKMFA
VDSKALPQNKLRPLSQEEIAQRREQARKRHAEKLVNQMQKLEQNPPEKTVEISPMNASTK
DLHVESPMEQADLSTCLQESQQKEHFIAFARVYSGTIRRGQKLFVLGPKYDPSEALTKLP
VRCSPNDDLSIPHLACCTVEDLFLLMGKELENVEEVPVGNVLGIGGLEDYVLKSATLSTS
PVCPPFTPLNFEATPIVRVAVEPKHPSEMPQLVRGMKLLNQADPCVEVLVQETGEHVLVT
AGEVHLQRCLDDLRERFAKVEISSSAPIVPFRETLIRPPKVDMVNEDIGTQQKIAVIHQK
KEDQNKYPEGVIVDSDGLVTLNTPNKLSILSVRAMPLPEAVTQLLEESSDLIRTLEQFNL
SVKEGRDTQEINPTTLEAIQKFKQKLEENFVGRKWRNAVDQISSFGPRRCGPNILLNRLE
SYHRPSMWQCLDKTRNDLGTYKDFDNSIISGFQLATLSGPVCEEPLMGVCFILEKWDMSK
VQQLVQTHNQSLTEGQTAKVEELQEQVTSNENSLSELEPRMEKQPRPGDQIQESQTPAES
VADSLCNSEAKLTDCYGPFSGQLIATMKEACRFAFQARPQRLMAAMYTCEIMATAEVLGR
VYAVLSKRTGRVLQEEMKEGTEMFIIKAILPVAESFGFADEIRKRTSGLASPQLVFSHWE
VIQSDPYWVPTTEEEYLHFGEKADTVNQANKYMNTVRKRKGLYVEEKIVEHAEKQRTLSK
NK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatactaatttggaaaatattgttgatctacaaaagaatactgccaacatccgg
aatatctgtattgtagctcatgtggaccatggaaaaaccacattagctgatagccttatt
gctagcaatgggatcatttctaatcgacttgcaggaaagttgcggtacatggacagccga
gaagatgagcagctccgtggaatcacaatgaaatccagttctatttcattgcatttcact
gtggataatcaagaataccttattaacatgatagattctcctggccatgtggatttttcc
tctgaagtatcgactgctgtgcgtgtatgtgatggtgctgttgtggtagttgatgttgtt
gaaggtgtttgtcctcagacgcaagcagtgttacgccaggcttggttggaaaatattcgt
ccagttttagtaattaacaaaatagatcgactgataattgagctaaaattgactccattt
gaagcttatattcacttacaaaaaattctagaacaggtaaatgcagtgactgggagtctg
tttacttcaaaagtattggaagagagagcagagatgggagtaacagaaaaaactcgttca
gacaccaagagcagtgaacatttctacgactggagtgctggcctggaagaaacagatgat
tcgcatctttactttgcccccgatcagggaaatgtggtatttggaagtgctattgatggc
tggggtttcaggattgaacagtttgcccagatgtacagccagaaggtgggtattagtgca
caagtgttgctgaaaactctgtggggtgactactatctgaacacaaaggcaaagaagata
atgaaaggagcacagtcaaaaggtaaaaaacccctctttgtgcagttagtgttggaaaac
atctggagtctgtatgagtgtgtcgttgtcagaagggacaaagagaagattgataagatt
gtaaattcattgggtctaaccatcctacctcgtgattcacgccacacggattctaaagtg
cacctcaatgccatttgtactcaatggcttcctatttcccatgctgtgttgtcaatggta
tgtaacaagctccccagccctttggatattgctgcagaacgggttgaaaaactcatgtgt
gttcgaagccgtagattcgattcgctgcctccgcaaatccaagccctcagacaagcattc
cttgaatgtaagagtgatgagacagccccagtgattgtgtttatttgcaagatgtttgca
gttgattccaaggctttgccccaaaataagttaagacccttgagtcaagaagagatagct
cagcggcgggagcaggccagaaaaaggcatgcagaaaaacttgtaaatcagatgcagaag
ttggaacaaaacccacctgagaagactgttgagatctccccaatgaacgcaagcacaaaa
gacttgcacgtagagagtccgatggaacaggcagatctgtctacttgcttacaggagagt
caacagaaagagcacttcattgcgttcgctagagtatatagtggaacaattcgtagaggg
cagaaattgtttgtgctgggaccaaagtatgacccttcagaagctttaaccaagttgcca
gtgagatgctcaccaaatgatgacctgtcaatcccacacttggcttgttgtacagtggag
gacttgttcctgctcatgggaaaggaattggagaatgtggaagaggtaccagttggcaat
gtgctcggtatcggaggcctagaagattacgtcttaaaatctgctacgttgtcaacgtca
cctgtatgtccaccatttacacctctgaactttgaggcgactcctattgtacgggttgct
gtggaaccaaagcatccaagtgaaatgccacagctggtgagagggatgaagctgcttaac
caggctgatccgtgtgtggaagtgctagtccaagagactggagagcacgtgttagtaact
gctggagaggtccacctgcagcgatgcttggatgacctcagagaaaggtttgcgaaggtt
gaaatcagttcatcagcaccgatcgttccatttcgggagactctcattcgcccaccaaag
gtggacatggtaaatgaagacataggaacacaacaaaagattgctgtcattcaccaaaag
aaggaggaccagaataaatatcctgaaggtgtgattgtggattccgatggccttgtgacc
ttgaacacacctaacaagttgtctattctcagtgtgagagccatgccacttcctgaagca
gtgacacagttgctggaagaaagcagtgatctgattcgtacattagagcagttcaatcta
tcagtaaaagaaggcagagatacacaggagatcaatccgacaacacttgaggccatccaa
aagttcaaacaaaagctggaagagaattttgttggtcgaaaatggagaaatgcagttgac
caaatttcatcatttggaccacgccgttgtggccctaatattttactaaatagattggaa
agttatcataggccatccatgtggcagtgtcttgataaaaccaggaacgacttggggaca
tacaaggattttgacaatagtataatcagtggatttcagttggcgactctgtcaggtcct
gtgtgtgaagagcctctgatgggtgtttgcttcattttagaaaagtgggacatgagtaaa
gtgcaacagctagttcaaacacataaccaatctttgacagagggacaaacagcaaaggtt
gaggagttgcaggagcaggtaacttcaaatgaaaatagcctttctgaattggagcctaga
atggaaaagcaaccaagaccaggcgatcagattcaggagagtcagactccagcagaaagt
gtggctgatagcctgtgtaactcggaagccaagcttacagattgctatggtcctttctca
ggccagctcatcgccacaatgaaagaagcttgtcgctttgcattccaggcacgacctcaa
cggctcatggcagcaatgtacacgtgtgagattatggcaactgcagaagtattaggtcgg
gtctatgcagtcctttcgaagcgtacaggccgggtgttgcaagaggagatgaaagaaggg
acagaaatgttcatcattaaggccattttgccagttgcagagagctttggcttcgctgat
gaaatccggaagcggacaagtggcctcgccagcccacagctggtgttcagtcactgggag
gtaattcagagcgacccctactgggttccgacaacagaagaagagtacttgcattttgga
gagaaggctgatacagtaaaccaggcaaacaaatacatgaataccgtgcgcaaacggaaa
gggctgtatgtagaggaaaagattgttgagcatgctgagaagcagagaaccctcagcaaa
aataaataa
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