Chiloscyllium punctatum (brownbanded bambooshark): 140469485
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Entry
140469485 CDS
T11285
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b
KO
K02599
Notch 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140469485 (notch1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
140469485
NCBI-ProteinID:
XP_072422142
LinkDB
All DBs
Position
49:complement(27916413..28032122)
Genome browser
AA seq
2516 aa
AA seq
DB search
MFGLSLCLILLPAFLSALRCYTSCSNGGRCNRNPNGTEDCLCSSGYVGARCQFADPCLSS
PCENHGSCSAVVRGQTVDYACACQLGYTGHQCLSLLDNACLSNPCHNGGSCQLVNNLREY
KCRCPPGWAGKQCQQADPCASNPCANGGQCVAFEAHYICKCIAGFHGPTCNQDVNECGVN
PSPCRNGGTCFNHIGSYQCTCPPEYTGRSCENLYVPCSPSPCQNGGTCRQLGDSLYDCTC
LPGFSGQHCEVNVDDCAEHHCQNKGLCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNA
CQNGGTCHNTNGGYNCVCVNGWTGDDCSENIDDCAIAACYSGATCHDRVASFYCECPHGR
TGLLCHLDDACISNPCHEEANCSTNPVNGKAICTCPVGFSGASCKQDDDECSLGSNPCEH
SGKCVNTLGSFKCLCQPGYHGPRCELDINECMSSPCHNDATCLDLIGKFQCICMSGYEGV
FCEIDIDECASNPCLNKGNCVDKINKFECECPSGFNGNLCQIDVDECASTPCQNEARCVD
GPNKYHCQCLEGFTGTLCETDIDECEQDPCHYGVCKDEIATFLCVCNQGYTGRVCDININ
ECQSQPCQNGGSCQDKIDGYVCACLKGTTGVNCETNLDDCASNPCEYGNCIDQINSYDCV
CEIGYSGPMCNINIDECASNPCHNGGTCKDGINSFTCVCPEGYHDLVCLSEVNECNSNPC
IHGECQDHLNGYSCECSPGWTGTNCDLNVNECESHPCVNGGMCRDMNNGYLCDCQPGFRG
PNCQTNINECASNPCLNQGSCIDDVAGYKCNCVLPYTGVNCEDVLAPCSSQPCQNGGVCH
ESEDYENFSCDCPEGWQGQTCQKDVNECVKSPCLNGATCQNSMGGFQCVCRQGYTGTICE
TDVDDCQPNPCHNGGSCSDGVSSFTCDCLPGFRGPKCEEDINECASDPCRNSGNCTDCVN
SYTCTCPLGFSGMHCENNTPDCTESSCFNGGTCVDGINTFTCLCPTGFTGSYCQHNINEC
DSRPCLNAGTCHDSYGTYKCTCPQGYSGLNCQNLVRWCDSSPCKNGGTCWQTGTTYRCEC
RSSWTGLYCDVPSVSCEVAAKQQGLDTEQLCRNSGICIDAGNTHHCRCQAGYTGSYCEEQ
VDECTPNPCQNGATCTDYLGGYSCKCVAGYHGINCSEEINECLSQPCDNGGTCINLINTY
KCSCPRGTQGVHCEINLDDCNPQLDSLPLDPRCFNEGRCVDRVGGYSCICPPGFVGEHCE
GDVNECLSNPCDPRGTQNCVQLINAYHCECRPGYTGLRCDRIIDSCKDRPCRNGGTCSVA
GNTVHGFICRCPLGYEGASCENQASVCGNLQCHNGGTCVLTQGGSPRCACPLGQGGVDCQ
LPTRNPCKSNPCYNGGTCESVPTEPFYRCHCPRLFNGLQCFILDYEFEGGNGRNITFPPN
IEQGCDKPECVQLAKNRVCEAHCNTHACDWDGGDCSLNFNDPWKNCSHALQCWRYFGDGK
CDKHCNNVGCLYDGFDCQSIESQCNPLYDQYCKDHYDDGHCDQGCNNIECGWDGLDCAND
KPQKLAEGTLLLIVLVPPEQLLNDSVGFLRELSHILHTNVKFKRHPNGDMMVYPYYGNKE
QLHRHHVKRSMAEASDRVIDALSHVKRSLYALVSPRSRRELDRQEVKGSIVHLEIDNRQC
YQAFSDCFASTTDVAAFLGAMASQGSLQLPYNIETVESEGIVTIHDDNLYPMYVVVSVLI
FLAFIGMGVLVSRKRHREHGQLWFPEGFKVTESSKKKRREPVGEDSVGLKPLKNVSDGAL
MDDNQNEHWGDDRSADTKRFKFEEQVILVNREEHTDHRQWTQQHLDAADLRLPTMAPTPP
QGETESDCMDVNVRGPDGFTPLMIASCSGGGLETANSEEEVDDASGNLISDFIYQGAKLH
NQTDRTGETALHLAARYARSDAAKRLLESSADANIQDNMGRTPLHAAVAADAQGVFQILI
RNRATDLDARMHDGTTPLILAARLAVEGMVEELVNCHADVNAVDDFGKSALHWAAAVNNV
EATLVLLKNGANKDMQDNKEETPLFLAAREGSYETGKLLLEHFANREITDHMDRLPRDIA
QDRMHHDIVRLLDEYNLVRSPQVSMGPNATTLSPTICSPNGYVANLKPASHGKKTRKNSA
KAGSGKDSKEAKAKRKKSQDGKGSLLDNPAVLSPVDSLESSHTYLSDVASPPLLTSPFQQ
SPTIQLNHLQGLAGDGQLNLGHLSMGSKQEMALSGSNRMVFESVAPRLSHMPSSNGQALG
NTSMGMKLGGAGTVSGQCDWLARMQAGMQQNVYSALRNPVQSQAGRLQQNQHGMMTSLHS
GLPNTALSPIISYQGLANTTRLSQPHLIQQQSQAMQPLNNMPTGNAHPTSQSYCNGDSRQ
NDLSPMGANNLPMHMVSAQETQLVQTSMPTSMSQSMATTQFLTPPSQHGGYSSMDNTPNH
PFPLADHPFLTPSPESPDQWSSSSPHSNMSDWSEGISSPPTSMHSQMGHLSDQVFK
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atgtttggattgagtttgtgtctcattttactgccagcctttctctcagctttgaggtgc
tacacctcctgctccaacgggggcaggtgtaacaggaatccgaatggtaccgaagattgt
ctgtgcagtagtggctatgttggagctcggtgccagttcgcagacccatgcctaagctcc
ccatgtgagaaccatgggagctgcagtgctgttgtccggggccagactgttgattatgca
tgtgcctgccagctgggttacacagggcaccaatgcctctccctcctcgacaatgcctgt
ctcagcaacccctgccataatggaggcagctgccaactggtcaacaacctgcgggaatac
aagtgtcgctgtccgccaggctgggcaggaaagcagtgccaacaggcagacccttgtgca
tccaatccatgtgccaatggaggtcaatgtgtagcgtttgaagctcattacatctgcaaa
tgcatagctggattccatggtcccacgtgcaatcaggacgtgaatgaatgtggagtaaac
ccctcaccctgtcgcaatggcgggacctgcttcaaccacatcggctcttaccagtgcacc
tgcccccccgagtacactggccgcagctgtgagaatctctacgtgccatgttcaccatca
ccttgccagaacggaggcacctgtaggcagcttggagactctctgtatgactgtacctgc
ctcccagggttttctggacagcactgtgaggtgaatgtggacgattgtgctgaacatcac
tgtcagaacaaaggcctgtgtgtggacggtgtgaacacctacaattgccagtgtccacca
gagtggacaggtcagttttgtacggaggatgtggacgaatgccagctacagcctaatgcc
tgtcagaatggaggcacctgccataacacgaatgggggctataactgcgtctgtgtcaat
ggctggacaggagatgattgcagtgagaacatcgatgactgtgccattgcagcctgctac
agtggggccacgtgccatgatcgtgtcgcctccttctactgcgagtgtccccatggcagg
accgggttgctgtgtcacctcgacgacgcttgtattagtaatccctgccatgaggaggca
aactgcagtacaaatcctgtcaacggcaaagccatctgcacgtgtccagtcggattctcg
ggggcttcctgcaagcaggatgatgatgaatgctctctggggtccaatccttgtgagcat
tcagggaagtgtgtgaacaccctgggatccttcaagtgtctgtgccagcccggttaccat
gggcctcgctgtgagctggacattaatgaatgtatgtccagcccctgccacaatgatgcc
acctgcctcgacctgattggaaaattccagtgcatctgcatgtctggatatgagggagtc
ttctgcgaaattgatattgatgaatgtgccagtaatccgtgcttaaacaagggtaactgc
gtcgacaaaatcaataagtttgagtgcgaatgcccctcaggattcaatgggaatctgtgt
cagatagatgtggacgaatgtgcaagtactccctgtcagaatgaagcccgctgtgtggat
ggacccaacaaatatcactgtcaatgtttggaaggttttactggaacactgtgtgagacg
gacatcgatgagtgtgagcaggacccctgtcactatggcgtttgtaaggatgagattgcg
acctttctctgtgtctgtaaccagggttacacaggccgagtatgtgatatcaacattaat
gagtgtcagagccagccatgtcagaatggaggaagctgccaggataagatcgatggctat
gtgtgtgcctgtctaaaaggaaccacaggcgtgaactgtgaaacaaatctggatgattgt
gccagtaacccgtgtgaatatggcaactgcatcgatcagattaacagttatgactgtgtc
tgtgagatcggatattcaggccctatgtgtaacattaacattgatgagtgtgcttcaaac
ccttgccacaatgggggcacttgcaaagatggcatcaacagcttcacttgtgtctgtcca
gagggttatcatgacttggtttgtctgtcagaggtgaatgagtgcaacagcaacccctgt
atccacggagaatgtcaagaccacctcaatgggtacagctgtgagtgtagtccaggttgg
actggaacaaactgtgacctgaatgttaatgagtgtgagtctcacccttgcgtgaatggg
ggcatgtgtcgggatatgaacaatggctacctgtgtgactgtcagcccgggttccgagga
cccaactgccagacgaacatcaatgagtgtgcatcgaacccgtgcctgaaccaggggagc
tgcattgatgatgttgctggatacaagtgtaactgtgtcttaccatacacaggagtgaat
tgtgaggacgtccttgctccgtgctctagtcagccgtgtcaaaatggtggcgtgtgtcac
gagtctgaggattacgagaatttctcctgcgactgtccagagggatggcaaggtcagact
tgtcagaaagatgtgaacgaatgtgtgaaaagcccctgcctcaatggagccacttgccag
aactcgatgggaggattccagtgtgtctgccgacagggttacaccggcaccatctgtgaa
accgacgtggatgactgtcagcccaatccatgccataatggaggctcgtgctctgatgga
gtcagtagcttcacctgtgactgtctccctggattccgtggtcccaaatgtgaggaggat
attaacgagtgtgccagtgacccctgcaggaacagtggtaactgcacggactgtgtcaac
agttacacatgtacctgtcccctgggcttcagtggtatgcactgtgagaacaacaccccc
gactgcacagagagttcatgttttaatggtgggacgtgtgttgatggaatcaataccttc
acctgcctttgtccgactggtttcacaggcagttactgccaacacaacatcaatgagtgt
gactccagaccatgtctcaatgctggcacttgtcatgacagctatggcacctacaagtgc
acctgtccccagggctactctggcctcaactgtcagaacctagtacgttggtgtgactca
tccccttgtaagaatgggggaacctgttggcagactggcaccacctatcgatgtgaatgt
cggagcagctggactggcctctactgtgatgtgcccagtgtgtcctgtgaagtggcagcc
aaacagcaagggctggacacagagcagctgtgtcggaacagtggtatctgtattgatgct
ggaaacacacaccattgtcggtgccaggctggctacacaggcagttactgtgaggagcaa
gtggacgagtgtacccccaacccctgccagaacggagcgacctgcactgactatctgggc
ggctactcctgcaagtgtgttgctggttatcatggaattaattgctcagaggagattaac
gagtgtctctcccagccctgtgacaatgggggcacatgtatcaacctcatcaacacctat
aagtgctcctgtcctcgtgggactcagggtgtgcactgtgagataaacctggatgactgt
aacccccaattggactctctgcctctggaccctcgatgtttcaatgagggacgctgtgtg
gaccgtgttggaggttacagttgcatctgtcccccgggatttgtgggtgaacattgtgaa
ggcgacgtcaatgagtgtctgtcaaacccatgtgaccctcgaggaacccagaattgtgtt
caactcatcaacgcctaccactgtgaatgccggccaggctatacagggctccgatgtgac
cggattattgacagctgtaaggaccggccatgtcgaaatggcgggacatgctctgtcgct
gggaacacagttcacggcttcatctgtcgctgccccttgggttatgagggagcatcctgt
gagaatcaggccagtgtctgtggtaatctgcagtgccataatgggggaacgtgtgtactg
acgcaggggggttctccccgctgtgcctgccccctgggacaaggcggggtggactgccag
ctgcccaccaggaacccgtgcaagtccaacccatgttacaatgggggcacatgcgagagt
gtacccactgagcctttttaccgctgccattgtcctcgcctcttcaatgggctgcagtgc
ttcatcctagattatgagtttgaaggaggaaatggacggaatatcacgtttcccccgaac
attgagcaaggctgtgataaacccgagtgtgtgcagcttgccaaaaaccgggtgtgtgag
gctcactgtaacactcacgcctgcgactgggatggtggagattgctccctcaacttcaat
gatccctggaagaattgctcacatgctctgcaatgctggcgttactttggagatgggaaa
tgcgataaacactgcaacaatgtgggttgcctgtatgatggttttgactgtcagagcatc
gagtcccagtgcaatcccctgtatgaccagtactgcaaagatcactatgacgatggccac
tgcgaccagggctgtaataatatcgagtgtggatgggatggtctggattgtgccaacgac
aagccacagaagctggcagagggaacactgctcctcattgtcctggtgcctcctgaacaa
ctgctgaatgactcggtggggttcctccgtgagctcagccacatcctgcacaccaacgtc
aagtttaagaggcaccccaatggcgacatgatggtttacccttactatgggaacaaggag
cagctgcacagacaccatgtgaagaggtcaatggcagaggccagtgaccgagtcattgac
gcattgagtcatgtcaaacgctcgctctatgcactggtgtcccctcggagccgcagggaa
ttggaccggcaagaggtcaaagggtcgattgttcacctggaaatcgataatcgacagtgt
taccaggctttctctgactgtttcgccagtacaacagatgtggcagctttcctgggtgcc
atggcttcccaaggcagcctccagctaccatacaacattgagactgtggagagtgaagga
attgtgactattcatgacgataacctgtatcccatgtacgttgtggtgtctgtgctcata
tttctggccttcattgggatgggggtgctggtgtctcggaaacgacatcgagagcatgga
cagctctggttccccgaaggttttaaggtgacagagagcagcaagaagaaacgccgggag
ccggtgggcgaggattcggttgggttgaagcctttgaagaatgtttctgatggagcactc
atggatgacaaccaaaatgagcactggggtgatgacaggtcggccgacaccaagagattc
aagttcgaagagcaagtgattttggtgaaccgtgaggagcacactgaccacaggcaatgg
acacagcaacacctggacgctgctgatctccgactgcccaccatggcccctacacctcct
cagggagagactgagtctgactgtatggacgtcaatgtcagaggcccagatgggttcacc
cccctgatgatcgcctcgtgtagtggagggggtctggagacagcgaacagtgaagaggaa
gtagatgatgcttccgggaatctcatctccgacttcatttaccagggggccaagctccac
aaccagactgaccggacgggtgagactgccctgcatttggctgcacgctatgcccgttcc
gacgcagccaaacgcctcctagaatcaagtgcagatgccaacatacaagacaatatgggc
aggacccctctgcacgctgcagttgctgctgatgcccagggagttttccagatcttgatc
cggaacagagccacggatttggatgcgcgaatgcatgacggaaccacaccattaatcctg
gctgcacggttggctgtggagggaatggtggaggagctggtgaactgccatgctgacgtc
aatgccgtggatgactttgggaaatctgctttgcactgggctgctgctgtcaataacgtg
gaggcaacattggtccttttgaaaaatggagccaataaggacatgcaggacaacaaggaa
gagaccccactgtttctggcagctcgggaagggagttacgagacgggcaagctcctgctt
gagcactttgcgaaccgtgaaatcactgaccacatggaccgattgccccgtgacattgct
caggaccgcatgcatcatgatatcgtgaggttgctggatgagtataacctggtgaggagt
cctcaggtgtcaatgggccccaatgccaccaccctctccccgacaatctgctcacccaat
ggctacgtggccaaccttaaaccggccagccatggcaagaagacccggaagaacagtgcc
aaggctgggagtggcaaggactccaaagaggccaaggcaaagaggaagaaatctcaggac
gggaagggaagcctgttggacaatccagctgtcctgtctcctgttgattccctggaatct
tctcacacctacctctcggacgtggcctctcctcctctcttgacatcccccttccagcag
tcacccactatccagctcaaccatttgcaaggactagctggtgatgggcagctaaacctg
ggccacctgagcatgggcagtaagcaggagatggctctgagtgggtccaacaggatggtc
ttcgaatcagtggctcctcgcctctctcatatgcccagctccaatgggcaggctctgggc
aacacttcaatgggcatgaaactgggaggggctgggactgtgagcggccaatgtgactgg
ctggctaggatgcaggccggaatgcagcaaaatgtttacagtgccttgaggaacccagtc
cagtcccaagccggcagactccagcagaaccagcatgggatgatgacctccttacacagt
ggactccctaacaccgccttatctccgatcatcagctaccagggtctggccaacaccacc
aggctatcccaaccccatctgatacagcagcaatcgcaggccatgcagcccctcaataac
atgcccactggaaatgctcaccccacgagtcaaagctactgcaatggtgattcacgacag
aatgatctgtccccaatgggggcaaacaacctccctatgcacatggtttcagctcaggag
acccagctggtccagacgtcaatgccaacctccatgagtcagtcaatggccaccacccag
ttcctgactcccccctctcagcacgggggctactcctctatggacaacacgccaaaccac
cccttcccattggctgaccaccctttcctcaccccctccccagagtcccctgaccaatgg
tccagctcctcgccgcattccaatatgtcagattggtcagaaggtatctccagtcctcca
accagcatgcactcccaaatgggacatctctctgaccaggtcttcaagtga
DBGET
integrated database retrieval system
