Chiloscyllium punctatum (brownbanded bambooshark): 140472980
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Entry
140472980 CDS
T11285
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140472980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140472980
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
140472980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Utp13
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_Nup120_160
WDR54
Beta-prop_VPS8
Beta-prop_IP5PC_F
WD40_like
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
140472980
NCBI-ProteinID:
XP_072423649
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MASPAVHFKTNYAVSIKIEPFYKGGKVQINKDGTCMFCTCGTKVNIVDIGTGKVTRSIEQ
EDQEDITCFSLSPDDEILVTSSRALLLKQWDWKENACTRTWKAIHTSPVASMAFDSTSTL
LATGGCDSTIKIWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRLWNLS
TSKCMMVLDAHYSSVTSLAFTPDGNTLVSSGRDKIYIVWDLKTYKSERTVPVYETVEAVV
LLPENEDFTALGVTGKEPHLITAGSKGILRVWEAYSGRCVYSQCVPGKLQKVTEGDADEQ
SLTHCAIVPATQKLTTVTAEHNILTYDLCTLNLTRQFVGYNDEVLDVKFLGPSDTHIVVA
TNSPQLKVFELATLNCQILYGHTDTVLALDVFKKGTKFASCSKDKTVRIWKMSKTTGEVN
CVAQGLGHAHSIGIISCSRLKEGFIISGSQDCTLKLWNLTKSIEVNSKKAAEPEIFHAEL
TEQVHDKDINSVVVSPNDKLVATGSQDRTAKLWSTSDFSLIGVFRGHTRGIWSVQFSPMD
QILATSSADGTVKLWGLQDFNCLKTFEGHDASVLKTIFVSRGTQLLTSASDGLLKLWTIK
TNECVKTLDAHENKVWGLHCNKKDDMVVSGAADSCIIIWKDVTEIELAEEQAKQEDQILK
HQELSNLMHEKKYVKALGLAISLDQPQTVLTVIKAIFGEAKGRERLESTILKLRQDQKES
VLKFCIVWNTNSKHCHEAQCVVQILLQNETPEQLLQYNGIKGALEGLIPYTERHFQRVNR
LLQASMFLDYMWQSMRLTGSSCDSDIHIGGMEIDPFFSMDKAAIGAGKAAITPGSDCPQG
SKKQEVGKNVDIDSDSSASNRGNGHKQKHLLSACEHLKENSKPAAESQSDSEEDTKSSEQ
RAKTSVRKIKQTPPSVRKKTISPNELML
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcccgctgtacacttcaaaacaaactatgctgtttccatcaagattgaacca
ttttacaaaggaggaaaagtacagataaataaagatggaacgtgcatgttctgtacttgt
ggaacgaaggttaatatcgttgatatcggaacaggaaaggtgacaaggagtattgaacag
gaggatcaagaagacattacctgcttcagtctcagccctgatgatgagatattggtgaca
agtagtcgtgccttactcctgaaacagtgggattggaaagagaatgcatgtacacgtact
tggaaagctattcacactagtccagtggcgagcatggcttttgattctacctcaacgtta
ttggctacaggaggatgtgatagcacaatcaagatttgggatgtcatcaagcagtactgc
acgcacaatctgaagggttcctctggagtagttcacttggttgaatttcatcctgacata
tcacgtcttcagctgttttcctcttcgatggactataagatacggctctggaacctcagc
accagtaaatgtatgatggtgctggatgctcactacagctctgtgacctccctggcattt
actccagatggaaatacacttgtcagctccggccgagataaaatctatattgtatgggac
ttgaaaacatacaaatcagagagaacagttcctgtgtatgagactgtggaagcagtagtg
ttactgccggagaacgaagatttcactgccttgggagtgacgggcaaagaacctcatctt
atcacagcaggcagtaaagggatcctccgagtttgggaagcttactctggaagatgcgtg
tactcacagtgtgtgcctggtaaacttcagaaagttactgaaggggatgcggatgagcaa
tctctgacccactgtgccattgttccagcaacgcagaaactaaccacagtaactgctgaa
cacaatattcttacctatgacctatgcactttgaaccttacgcgccagtttgtaggttat
aatgatgaagtgctggatgtaaagtttttgggcccatctgacacacacattgttgtggcc
accaacagcccacagctgaaagtatttgagcttgcaacgttaaattgtcaaattctatat
ggacacacagataccgtattagccctggatgtgtttaagaaaggcaccaaatttgccagt
tgttcaaaggacaaaaccgttcgaatctggaaaatgagtaaaacgactggagaagtgaac
tgtgtggcacaaggcctaggacatgcccacagcatcggtattatttcttgctcaagattg
aaagaaggcttcattatcagtgggagccaggactgcaccctaaagctgtggaatcttaca
aagtccattgaggttaacagtaagaaagccgcagaacctgaaatctttcatgctgagttg
actgagcaagttcacgacaaggatataaacagtgtggtagtctctccaaatgacaagctg
gtggctaccggctcacaggacagaacagcaaagctctggtccacatctgatttctcactc
atcggagtgtttcgaggtcacacccgtggaatttggtcggtccagttttctccgatggac
cagatcctagctacctcttcagcagatggcactgtcaaactctggggacttcaggacttc
aactgcttaaagacgtttgaaggccatgatgcttctgtactgaaaacaatttttgtgagt
cgtggaactcagctgttgacaagcgcatctgatggcttgctgaaactgtggaccatcaaa
actaatgaatgtgttaaaacattagacgcccacgagaataaggtgtggggtctccactgt
aataagaaagatgatatggtcgtctctggagcagcagactcgtgtataattatctggaag
gatgtgaccgagatagagcttgccgaagagcaggccaaacaggaagaccagattttgaag
caccaagaattatctaatttaatgcacgagaagaaatatgtgaaggctttgggattggca
atttctttggaccaacctcagactgtgcttacggtcattaaagctatatttggtgaagct
aaaggacgtgaaaggctggaatcaacaatcctcaagttgcgacaagatcagaaagagtct
gtgttaaagttctgcattgtatggaacacaaattctaaacactgccatgaagctcagtgt
gttgtccagatcctcctacaaaatgaaactcctgagcaacttcttcaatacaatgggatt
aaaggtgctttggaaggattaatcccttatactgagcgacatttccagagggtgaataga
ctgttgcaggcttcaatgtttctggactatatgtggcagagtatgagactgactggaagc
tcctgtgactcagacatacacattgggggcatggagattgacccgttcttttcaatggac
aaagcagccatcggggccggaaaagcagcaattactccaggatccgattgcccccagggg
agcaagaagcaggaggttgggaaaaatgtggatattgacagtgacagtagtgcatcaaac
cgtggaaatggccacaagcaaaaacacctgctgtcagcttgtgagcacctcaaagagaat
tcgaagcccgcagcagaaagtcagagtgattcagaggaagacacaaaatccagtgaacaa
agagcaaagacatctgtaagaaaaataaagcaaacaccgcccagtgtgagaaagaagaca
atctctcccaatgaattaatgctgtga
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