Chiloscyllium punctatum (brownbanded bambooshark): 140476183
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Entry
140476183 CDS
T11285
Symbol
six4a
Name
(RefSeq) homeobox protein SIX4a
KO
K15615
homeobox protein SIX4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140476183 (six4a)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
140476183 (six4a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
140476183
NCBI-ProteinID:
XP_072424474
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Position
4:35719208..35741728
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AA seq
752 aa
AA seq
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MRCKKLDRQDPAEKTILWGIRSRKREGKGGGGGGIRREKRNMSSASNEITNTIEVKEEND
SLQPKINTLGSAATLEPEVSALSTSPEISEQVPVELLTNPAAALTFSPEQVACVCEALQQ
GGNLDRLAQFLWSLPPSDLLRGNESILKARALVAFHQSRYKELYSILESHNFDASCHTSL
QDLWYKARYTEAEKVRGRPLGAVDKYRLRRKFPLPRTIWDGEERVYCFKEKSRNALKELY
KQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSENQSKSESDGNHSTEDESSK
GQEDMSPRPLSNPSDGMNHSNVHSPPEGMFMHHIGELKPSQNSSGILLNGNLVTTNGSPV
FYSGSSFIQGPNGVLVNGLSLGNAQTISLSPIGTTPSVLVNGISNGSTGGTELKTESVHM
LNSEEAVSSGSAEISRGPAQINQYSLVQLQNTENNIHLVNGNIGLPPLQLPSVSAASSQG
NILITNTSDGGTFLSGTAASLQQGKVFLAATLPPNAVMCTLPNSGQAVAPVKQDALEGGL
VFSQLMSVSGNNHMNINTSPGSQPGNTLQTQSSTLVNTGLPQNLPLTSSNLLNTSSTLSF
SLTVSLPLSTTASLNCDQQLSTAVTNAVPVVSMANSQYATLQNCNLLTSSGQETVTETGL
DASDTEVKPRNPITEETHEYSSGHVSVLHPPVKENYLVVLENKSSNHLTMMDSKSKYVIN
DVVNNVCKELETEEKELAKLQNVPMDEDLSDI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtaaaaaacttgatcggcaggatccagccgaaaagacaattctttggggcatt
aggagcagaaagagggaagggaagggaggggggggggggggaattaggagagaaaagaga
aacatgtcttccgcttcaaacgaaatcacgaacacaattgaggtaaaagaagaaaacgac
agcttgcaaccaaagatcaacacactgggctctgcagccactctggagcctgaagtgagt
gcactttctacaagcccggagatttccgagcaggtacccgtggaactgttaaccaacccc
gccgcggcgctgactttttcgccggagcaagtggcgtgtgtgtgcgaggctttgcaacaa
ggagggaacctggatcgcttagcccagttcttgtggtccctgcctcccagcgatctgcta
cgtggcaacgaaagcatcctgaaagcccgggctctggtggctttccaccagagtcgctac
aaagagctgtacagcattctggagagtcataacttcgacgcgtcctgccacacttccctg
caggatctatggtacaaagcccggtacacagaagccgagaaagtccgtggccggcccctg
ggggctgtggataagtacaggctgcgcaggaaattccccttgcccaggaccatatgggac
ggcgaggagagggtctactgcttcaaggagaaatcgcgcaatgcgctcaaagagttgtac
aaacagaatcgctacccatcgccggccgagaagcggaacctggccaagatcacagggctt
tccctcacccaggtcagcaactggttcaaaaataggcgccagcgagaccgtaatccatcg
gaaaaccagtcgaaaagtgagtcagatggtaatcacagcactgaagatgagtccagcaag
ggtcaagaagacatgtcgcctcgtccattgtcaaatccatctgatgggatgaaccactcc
aacgtccatagccctccagaaggcatgttcatgcatcatatcggggagctgaagccctcc
cagaattcctctggcatactactgaatggaaatcttgtaactacaaatggctctcctgtg
ttttacagtggaagttctttcatccaaggtcctaatggagtccttgttaatggattgtct
ttaggaaatgcccagacaataagtttaagcccaataggaaccactcccagcgtgctggtt
aatggtatttcaaatgggtctactggtggcactgaacttaaaactgaaagtgtacacatg
cttaattctgaagaagcagtgtcctctggatctgctgaaattagtagaggcccagcccaa
ataaaccagtatagccttgtgcagctgcaaaatacagaaaataacattcatttggtaaat
ggaaatattgggttacctccacttcagctgccttctgtttctgctgcgtcatcacaggga
aacattttgataacaaacacatcagatggaggaacgttcctaagtggtacagcagccagt
ctccagcaaggtaaggtcttcttggctgccacactcccaccaaatgcagtaatgtgcaca
ttacctaattcagggcaggctgttgccccagtaaaacaggatgcgttggaaggaggtctt
gttttttctcaattaatgtcagtgagtggaaacaatcatatgaatattaacacatctcct
gggagccaacctggaaataccctacaaactcaaagctcaacgctggtgaacacagggctg
cctcaaaatctgcctttgacttcgtcaaatttgctgaacacatcaagtactttgagcttc
agcctcacagtgagtttgccactgtcaactactgcatctctgaattgtgatcaacagttg
tctactgctgtcacgaatgcagtacctgtagtgtcgatggccaacagtcagtatgctaca
ctccagaactgtaatctgcttacaagctctggccaagagactgtaactgaaactggtctt
gatgcttctgacactgaggttaagcctagaaatcctattacagaagaaacacatgaatac
agtagtggacatgtgtctgtacttcatcccccagtaaaggaaaactacttggtagttcta
gaaaacaaatctagcaaccacctgacaatgatggactctaaatccaaatatgtgataaat
gatgtggttaacaatgtctgcaaggaattagaaactgaggaaaaggaactagcgaaactt
caaaatgttcctatggatgaagatctcagtgatatataa
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