Chiloscyllium punctatum (brownbanded bambooshark): 140476367
Help
Entry
140476367 CDS
T11285
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03013
Nucleocytoplasmic transport
cpun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140476367 (pnn)
03015 mRNA surveillance pathway
140476367 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140476367 (pnn)
03041 Spliceosome [BR:
cpun03041
]
140476367 (pnn)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140476367 (pnn)
Spliceosome [BR:
cpun03041
]
Complex C
Other components
EJC/TREX
140476367 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
140476367
NCBI-ProteinID:
XP_072424960
LinkDB
All DBs
Position
4:63584391..63606442
Genome browser
AA seq
640 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDENIRKLTGRDPNDLRPGQARRLSIAGPGGGRGRGLGL
LRRGLSDSGGGPPAKQRDLDGALSRLGDRRSRRESRQDSDAEDDEDTKKPALQSSVVATS
KERTRRDLIQDQTMDEKGKERNRRMFGLLMGTLQKFKQESNVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQDVWNEHNLKIIKYIRTKTKPH
LFYIPGKHCPATQKLLDESQRKMNGIFEHRRLEFADQINRMEVRPRRQSLKEKEQREVQK
EEQQNEEQEGKVAHHEEVEDLGNQNNDVEMEAAEEEVEVVAVKSVEKQQDKEQEVEAEEE
EVEEGENNSQPESMPVDDKEVSQNVENDQDMVEEVDECREERVEEVSKEPEPVPEPEPEL
EPEPEPKPVPELKYKLESEPKPEPELECSVGNEPAQSPVNTQPVDLQVEPVRVSPRKSTS
RSKSSSRSKSRGREKTKSKSHSRSSSSTSSSSSSSTSSSGSSSSSGSSSRSSSSTSSSSG
SSSRDSSSSTSSSSESRSRSRSRGHSRDRKRRRSSDRKRRVTSNADKDRKSSKPSSKDLK
GSREKGSRLDRKRSITESHSGKRSSRTERDHKLDRKDKKH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgagaagtttgcaggatcaactggagaaagcgaaggaaagtttgaag
aatgtggacgagaacattcggaagctgactggccgggacccgaatgacctcaggcccggc
caagctaggcggctatccatcgcaggtcctggtggaggtaggggacgtgggcttggatta
ctgagacgtggactctctgacagcggaggaggtcccccagctaaacagagagatttagat
ggggcactcagcaggctgggagatcgtcgatctaggagagagtcacgtcaagacagcgac
gcagaggatgatgaagatacaaaaaagccagcgttgcagtcttctgttgttgctacctcc
aaagaaagaacacgccgagaccttattcaagatcaaacaatggatgaaaagggcaaagaa
aggaatcggcggatgtttggcctgttgatgggtacactgcaaaaattcaaacaggaatct
aatgttgcaactgagaggcaaaaaagacgtcaggaaatagagcagaaacttgaagtgcaa
gctgaagaagaacgtaaacaagtagaaaatgaaaggagagaattatttgaagagcgtcgt
gctaaacaaactgagctaagacttctagaacaaaaagtggaactggcccagttgcaagat
gtatggaatgaacataatttaaaaataatcaagtacatcagaaccaagacaaagcctcat
ttattttatatacctggtaaacattgtccagctactcaaaagcttttggatgaatcccaa
aggaagatgaatggtatttttgaacacaggcgtctggagtttgcagatcaaattaacaga
atggaagttagacctagacgtcagtcactgaaggaaaaagaacagcgagaggtgcagaag
gaagagcaacaaaacgaggaacaggagggtaaggtggctcaccatgaagaggtggaggat
ttgggtaaccagaataatgatgtagaaatggaggcagcagaagaggaagttgaagtagtt
gcagttaaaagtgtagagaaacagcaggacaaggagcaagaagtggaggctgaggaggag
gaggtagaggagggggaaaacaacagccagccagagagtatgcctgttgatgataaggaa
gtaagccaaaatgtagagaatgatcaggatatggtggaggaagtagatgagtgtagggag
gagagagtagaagaggtttctaaggaacctgagcctgtgcctgagccagaacctgaattg
gagccagaacctgaacccaagccagtacctgagttgaaatacaaactggaatccgaaccc
aagcctgaacctgagcttgaatgttcggttgggaatgagccagcacaaagtcctgtaaac
actcagccagtggatttacaagtggaaccagttagggtgtcaccaaggaaaagcacaagt
aggagcaagagtagtagcaggagtaaaagcagaggtcgtgagaagacaaagagtaaaagt
cacagtcggagtagcagtagcaccagctcgagtagtagttcaagtaccagtagcagtggc
agtagctcgagcagtggtagcagtagtagaagcagttccagcactagcagtagcagtggc
agtagtagcagagatagcagcagtagcactagcagcagtagtgagagtcgaagtagaagt
cgtagtcggggtcacagcagggacagaaagcggaggaggagctcagatcgaaagcgtaga
gttacttcaaatgcagacaaagaccgtaagtcatcaaaacccagtagcaaagatttaaaa
ggatccagggaaaaagggtcacggttagataggaagagatctataacagaaagtcattca
ggcaaaagatcttcacggactgaaagagatcataaattggacaggaaagacaaaaaacac
taa
DBGET
integrated database retrieval system
