Chiloscyllium punctatum (brownbanded bambooshark): 140476405
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Entry
140476405 CDS
T11285
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140476405 (npas3)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140476405 (npas3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
140476405
NCBI-ProteinID:
XP_072425056
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All DBs
Position
4:complement(67437636..68759565)
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AA seq
925 aa
AA seq
DB search
MIRIFPDFSVQVTAATGGGGGAVTAAPGVGRTAAAANGTTQNVGLTSYQQRGPSFCYQAS
VMPSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKM
RDFANLGDPPWNLRMEGPPPNTSVKALGTQRRRSPSSVAINVFEQNLGSHILQSLDGFVF
ALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGILSQ
GTAEDGASSASSSSQSETPEPVESTSPTLLTIDNSLERSFFIRMKSTLTKRGVHIKSSGY
KVIHITGRLRLRVSLSHGRVLPTQIIGLVVVAHALPPPTINEVRIDCQMFVTRVNMDLNI
VYCENRISDYMDLTPVDIVGKRCYYFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWLQKNG
GYIWIQSSATIAFNAKNATEKNVIWVNYVLSDFEYKDVPMDIAQLPNLPEKTSESSETSD
SESDSKENSDDNENSKSDEKGNQSENSDDPEPDRKKQSGNHSDHEMNCNDDDNSSSNQDS
RDSDDSFENSDFESQKAAEDSFGTFGSMQIKVERYAGSESEMQLPNRESVTSDSAKDSDS
AGEMTIQSSSKHQKRKKRRKKQKGGSVTRRRLSSASSPSGLDSNIVDQPQLLSSPNSASV
LKIKTEITEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQANTSLHVTIP
DSVLTPPGTENTASRKTQFSTSSNTTLVPVTDPLSPPLSTSPRDKHLSSTSTTSSVLYTS
DLETLQRLQAGNVVLPLVHRVTGTLAATSTTPQRVYTTGTIRYAPAEVTFAMQGNLLPNT
HAVNFVDVNSSSFGLEPKTPMEMLYHHVHRINMSGPFGSTVSGASLAQMPAGNVFTTAEG
LFSTLPFPVYSNGVHTTQSLERKED
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgattaggattttcccggatttcagtgtacaagtaacggcagcaactggtggaggcggt
ggtgcggttactgctgcacctggtgtagggagaactgctgctgctgctaatgggacaacc
cagaacgtagggctgacatcgtaccaacaacgaggaccttcattctgctaccaagcttca
gtcatgccaagtttacaagccttgcgaaaggagaaatctcgagatgctgctcgatcacgc
cgtggaaaagaaaactttgagttctatgagttggcaaaattattgcctctccctgcagcc
atcacaagccaattagataaagcatcaataattcgcctcaccattagttacttgaaaatg
agggactttgcaaatctaggtgaccccccctggaatttgagaatggagggtcccccacct
aacacatctgtgaaagctttaggaacacagcgcagaagaagtccaagctccgtggccatt
aatgtgttcgaacagaatttgggaagccatattcttcagtctctggatggatttgtattt
gcattaaatcaagaaggaaaatttttatacatctctgaaactgtctccatatatttgggt
ctgtcacaggtggaactgacaggcagcagtgtgtttgattatgtccaccctggagaccat
gtggagatggcagagcagctgggcatgaaacttcccccagggcgaggcattctctcacag
ggtaccgcagaggatggagccagctcagcatcttcgtcctcacagtctgagacccctgag
ccagtagaatccactagcccaactttgctgactattgacaatagcttggagcgatcattt
tttataagaatgaagtcaacactgacaaagagaggagttcatatcaaatcatcgggctat
aaggtcattcatataactggacggttacggttgagagtatctctttcacatggacgtgtg
ctgcctactcaaattataggtctagtcgttgtggctcatgctttgccacctcccactatt
aatgaagtcaggattgactgccaaatgtttgtcaccagagtaaatatggacctcaatatt
gtttactgtgaaaatcggattagtgactatatggatctaactcctgtagatattgtgggc
aaacgatgctattacttcattcatgctgaggatgttgaagggatcaggcacagccacttg
gatttattgaataaagggcaatgtgtaactaagtactatcgctggctgcagaaaaatgga
ggctatatttggatccagtccagtgccactattgcattcaatgcaaaaaatgccactgaa
aaaaatgtcatctgggtcaattatgttctcagtgattttgagtataaggatgtcccaatg
gatattgcacagcttcctaaccttcctgagaaaacctctgaatcttccgagacttctgat
tctgaatctgattcaaaagaaaactcagatgacaatgagaattccaagtcagatgagaag
ggcaaccagtctgaaaacagtgatgatccagagccagacaggaagaagcagtctgggaac
cactcagatcatgaaatgaactgcaatgatgatgacaatagctctagcaaccaggacagc
agggacagcgatgacagctttgaaaattcagactttgagagtcagaaagcagctgaggac
agttttggcacttttggttctatgcagatcaaagtagaacgatatgcaggcagcgaatcg
gagatgcagttgccaaaccgggaatcagtgacctcagacagtgccaaggattcagatagt
gcaggagaaatgaccatccagtcttccagcaagcaccagaagagaaagaagaggagaaaa
aaacaaaaaggaggcagtgttacacgtagaaggctgtcaagtgcttcgagccctagtgga
cttgactcaaacatagtagaccagcctcaactgctgtcctcaccaaacagtgcctctgtg
cttaaaattaaaacagaaataacagaacctataaattttgataatgatagcagtatttgg
aattaccctcctaatagagagatctcaaggaatgaatccccttatagcatgaccaagccc
ccgagctctgagcacttcccctctccacaggccaacactagtttacatgtcactattcca
gactctgttcttaccccgccagggactgaaaatactgccagtcgtaaaactcagtttagc
acctcatccaacactaccttagttcctgtcacagatcctctgtctccacctctgtcaacc
tccccacgagacaagcatctcagcagcaccagtaccactagttctgtgctttacaccagt
gacctagaaacgctgcagaggttacaggctggtaatgtggtgcttcccctagttcatagg
gtaacaggaactctagctgccaccagcactactcctcagagggtctatactactggcacc
attcggtatgccccagctgaggtgacctttgccatgcagggcaacttgctgcctaacact
catgctgtcaactttgttgatgttaacagttctagttttgggttagagcccaagacacct
atggaaatgctttatcaccatgtacatcgaattaacatgtcagggccattcgggagcact
gtgagtggggccagtctggcccaaatgcctgcagggaatgtgttcacaacagcagaggga
ctcttttccacacttccgtttcctgtgtatagtaatggcgttcacaccacacaatcattg
gaacgtaaagaggattaa
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