Chiloscyllium punctatum (brownbanded bambooshark): 140476429
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Entry
140476429 CDS
T11285
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140476429 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140476429 (aqr)
Spliceosome [BR:
cpun03041
]
Complex B
Other components
Prp19-related factors
140476429 (aqr)
Complex C
140476429 (aqr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD_C_2
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA
Parvo_NS1
AAA_16
AAA_22
PhoH
DnaB_C
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
140476429
NCBI-ProteinID:
XP_072425124
LinkDB
All DBs
Position
4
Genome browser
AA seq
1441 aa
AA seq
DB search
MDSASHGKKMVAPTVSQINAEYVTQLSNRYWAPHVKKKMTFESKVIEDVYQQEIVKTKFA
IRKIMLLEFSQYLENYLWPNYSSEVSSKAYLMSICCMVNEKFRENVPAWETFTQKPEHFP
YFFKCILTASLAEENKDLTLREQTVLLVFLDHCFNSLEVDLIREQVQRLISLPMWMCLLS
SRLEHELKKTPKLRKFWNLLKKKEEKMDEKSAEQANQEKRFLSCLIGKFLGVLKSIPLSG
PVSMDMVHYCERFIELMIDLEALLPTRRWFSTVLDDSHLVTHCHLSNLVQREKEGRLFCQ
LLEMLKFYTGFEINDHTGNALTENEMTTIHYDRITSLQRAAFAHFPELHDFALSNVAAVD
TRESLVKHFGSLGPNTLHKVASNLCLLPSLPEAENTCYQKEFLLEMLVSRHERRTSQIQQ
LNEMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDVEDAISRLKPWQGEYGGVVFGGWARMAQPIVTFSIVEVAKPNIGENWPARVRADVT
INLNVRSQIRDEWEALRKHDVCFLITVRPVLTYGTKFDRKQPFAEQYGLVFVRGCEIQGM
LDEKGRVIEEGPEPKPKLKGDSRTYRVWLDPNQYQQDMSFSVQNGAEDVYETFNIIMRRK
PKENNFKAVLETIRNLMNTECVVPDWLHDIILGYGDPGSAQYSKMPNQISTLDFNDTFLS
IEHLKAGFPGCSIKTTVENSSLQKPPFRITFPVQLEKGKKRKGENDDGEKEETPTLIIEP
HVIPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLY
HNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYV
LARRLELLREVGRLQESLGVPGDVSYTCETAGHFYLYQVMSRWEEYLSKVKTKSGKSGDV
TTVSEHFPFHKYFANAPQPIFKSQSYEEDMEIAEGCFRHIKKIFTQLEEFRAFELLRSGL
DRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNP
EDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQGRARA
SLCNLYNWRYKKLGNLPHVQILPEFCTANAGLAYDFQLINVEDFNGIGESEPNPYFYQNL
AEAEYAVALFMYMRLLGYPAERISILTTYNGQKHLIRDVINQRCGGNPLIGRPSKVTTVD
RFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAFN
QLTARPLQLHIVPSEYHPTDRRNGDIPTHLMRIIKNMPEMANFVYNMYMQMIQNMHQYRK
QLFPPPEPVPVPDIENVKETKESVPENKDEETTEEDYKQMPEHPGRDSDSEGSGTEEDKE
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcatctcatgggaaaaaaatggtggcacccactgtatctcagataaatgct
gaatatgttactcagctatcaaataggtattgggcacctcacgtgaagaagaaaatgaca
tttgaatcgaaggtcattgaagatgtgtatcagcaagagattgtaaagacaaaatttgca
attagaaaaattatgctgcttgaattcagccagtatctggagaattatctctggccaaac
tattcctctgaagtatccagcaaagcttacctgatgtcgatttgctgtatggtgaatgaa
aaatttcgagaaaatgttcctgcttgggagacctttacgcagaaacctgaacactttccc
tattttttcaaatgtattttaactgcatctcttgctgaagaaaataaagatcttacattg
cgagaacaaactgtccttctggtgtttcttgatcactgctttaacagcttggaagtggac
ctaattcgagaacaggtgcagcgacttatctctctccctatgtggatgtgtctactttct
tcacgacttgaacatgaactgaaaaaaacaccgaagctgagaaaattctggaatctactt
aaaaaaaaggaagagaaaatggatgaaaaatctgcagaacaggcaaatcaagagaagaga
tttctttcttgtctcattggcaaatttcttggcgtattaaaaagcattcctctttcaggg
ccagtcagcatggatatggttcattattgtgaaagatttatcgaattaatgatagacttg
gaggctctccttccaacccgacgatggttcagcactgttttggatgattctcatttagtc
actcactgccacctatctaatctggtccagagagagaaggagggtcgacttttttgccag
ctgttagaaatgttgaagttctacacaggttttgaaattaatgatcacactggaaatgct
ctgactgaaaatgagatgactacaatccattatgatcggatcacctctcttcagagggca
gcatttgctcactttccagaactacacgattttgctctgtctaatgtcgcagctgttgat
acacgagaatctttagtaaaacactttggatcacttggtcccaatacacttcacaaagtg
gcatcgaatctttgtcttttgccatcgctacctgaggcagagaatacctgttatcaaaaa
gaatttcttttagaaatgttggtgtcccgacatgaacgccggacatcccaaattcaacaa
ttaaatgagatgccactttaccccacagaaaaaataatctgggatgaaaacattgtacca
acagaatattactctggagaaggatgccttgcgttacctaaactgaatttacagtttttg
acacttcatgactacttactcaggaattttaatctctttcgtcttgagtccacatatgag
attagacaggatgtggaggatgcaatcagtagacttaagccatggcagggggagtatgga
ggagttgtatttggtggctgggctcgaatggctcagcctattgtgactttctccattgtt
gaagtagcaaaacccaacattggtgagaactggccagcaagagtccgtgcagatgtgacc
atcaacctaaacgttcgctctcagatcagagacgaatgggaagcacttcgcaaacatgat
gtgtgcttcctcataactgttcgaccagtattgacttatggcacaaagtttgatcgcaag
cagccatttgcagagcagtacgggctcgtgtttgtacgaggatgtgaaattcaaggaatg
ctggatgagaaaggacgggtcattgaagaaggtcctgagcctaaaccaaagctgaaggga
gattcacgaacctatcgagtatggttggatcccaaccagtatcagcaggacatgagcttt
tctgttcagaatggagcagaagatgtctatgagaccttcaatattatcatgagaagaaaa
cctaaggaaaataattttaaggcagtgcttgagaccatccgcaatttaatgaacacagag
tgtgtagtccctgactggcttcatgatataatccttggatatggagaccctggaagtgct
caatattcgaagatgccaaatcagatttccacactggattttaatgatacctttctgtct
attgagcacctgaaagctggttttcctgggtgttctattaaaacaacagttgagaactct
tctctgcaaaagcctccatttaggatcaccttccccgtgcagcttgaaaaagggaaaaaa
cgaaagggggagaatgatgatggagagaaggaagagactccaactttaattattgaacct
catgtgattccaaaccgaggaccttacccatataaccagccaaagagaaacacaattcaa
ttcacaccaacacagatagaagcaattcgggctggtatgcagccaggactaacaatggta
gtaggcccaccaggtacagggaaaactgatgtggctgtgcagataatttctaacctgtat
cataactttccagagcagcggactctcattgtaacacattccaaccaggcattgaatcag
ctgtttgagaagatcatggctctggacattgatgagcgtcaccttctacgtctgggtcac
ggagaggaagagttggagactgaaaaggattttagcagatatggtcgggtaaattacgtg
ttggctcgacgacttgaattattgcgtgaagtgggacgattgcaggagagtctgggagtc
cctggggacgtgtcatatacttgtgaaacagctgggcatttttacctgtatcaggtgatg
tcacgctgggaagagtatctcagtaaagtaaagaccaaaagtggaaagtctggtgatgtt
acaacagtgtctgagcattttccattccataaatacttcgcaaatgcaccccagcctatt
tttaaaagtcagtcatatgaagaagatatggaaatagctgaaggttgtttcagacacatc
aaaaaaatatttacgcagctggaggagtttcgagcttttgaactgctgcgcagtgggctg
gacagatcgaaatatttactagtgaaagaagcaaagatcattgccatgacatgtactcat
gctgctttaaaacgacatgacctagtagagcttgggttcaagtatgacaacattctaatg
gaggaagctgcacagattcttgagattgaaacctttattcccctcctcctacaaaaccct
gaagatggtttcagtcgactgaagcgttggataatgatcggggatcatcaccagcttccc
cctgtcattaagaacatggccttccaaaaatattccaacatggaacagtctctatttaca
cgatttgttcgtttgggagttccaacagtggaccttgatgcccaggggagagcaagagct
agtttgtgcaatctctacaactggcgttacaagaaactaggcaacctcccccacgtccag
atcttacctgaattttgtactgccaatgccggtttagcatatgatttccaacttattaat
gtggaggatttcaatggaattggagaatctgaacccaatccatatttttaccagaatctg
gcagaggctgaatacgcagtggccctttttatgtacatgcgtttgctagggtatcctgca
gaaagaatcagcatcttaacaacatacaatggtcagaagcatttgattcgtgatgttatc
aatcagcgttgtggtggtaatcctcttataggacgaccaagcaaggtcaccacagtggac
agattccaagggcaacagaatgactatattatcctctctttggtacggactaaagctgtt
ggacatctcagagatgttcggcgattagttgttgccatgtcaagagccaggcttgggctg
tacatctttgcaagagtatcactgttccagaactgctttgagcttactccagcctttaat
cagctaactgctcgaccactccagctacacattgtgccctcggagtatcacccaacagac
agaaggaatggtgatattccaacccatttaatgagaattatcaaaaacatgcctgagatg
gcaaacttcgtttacaatatgtacatgcagatgattcagaatatgcaccaatatagaaag
caattatttccaccaccagaaccggttcctgtgccagatattgagaatgtcaaagaaacg
aaagagtcagttcctgagaataaagatgaagagacaacagaggaggactataaacaaatg
cctgagcaccctggcagggacagtgatagtgagggcagtggaactgaagaggataaagaa
agttaa
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integrated database retrieval system
