Chiloscyllium punctatum (brownbanded bambooshark): 140476482
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Entry
140476482 CDS
T11285
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04510
Focal adhesion
cpun04517
IgSF CAM signaling
cpun04518
Integrin signaling
cpun04519
Cadherin signaling
cpun04520
Adherens junction
cpun04530
Tight junction
cpun04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140476482 (actn1)
04518 Integrin signaling
140476482 (actn1)
04519 Cadherin signaling
140476482 (actn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140476482 (actn1)
04520 Adherens junction
140476482 (actn1)
04530 Tight junction
140476482 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140476482 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140476482 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpun04812
]
140476482 (actn1)
04147 Exosome [BR:
cpun04147
]
140476482 (actn1)
Membrane trafficking [BR:
cpun04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
140476482 (actn1)
Cytoskeleton proteins [BR:
cpun04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
140476482 (actn1)
Exosome [BR:
cpun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140476482 (actn1)
Exosomal proteins of colorectal cancer cells
140476482 (actn1)
Exosomal proteins of bladder cancer cells
140476482 (actn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_7
EF-hand_5
XisI
U3_assoc_6
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
140476482
NCBI-ProteinID:
XP_072425273
LinkDB
All DBs
Position
4:82600346..82810260
Genome browser
AA seq
916 aa
AA seq
DB search
MDHYDANHSQSDDYMQPEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEED
FRDGLKLMLLLEVISGERLPKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDG
NAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLG
FCALIHRHRPELIDYAKLRKDDPYTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAI
MTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLATDLLEWIRRTIPWLE
NRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEG
KMVSDINNAWGSLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWSTGKEEMLM
AKDFETATLSEVKAILKKHEAFESDLAAHQDRVEQIAAIAQELNELDYWDSPSVNERCQK
ICDQWDNLGALTQKRRDALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIV
HTIEEIQGLITAHEQFKATLPEADRERQAILGIHNEVSKIVQTYHVNMAGTNPYTTIAPQ
DINNKWEKVRHLVPQRDHALMEENARQQSNERLRKQFATQANVIGPWIQTKMEEIGRISI
EMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWE
QLLTTIARTINEIENQVLTRDAKGISQEQMNEFRASFNHFDRDHSGTLGAEEFKACLISL
GYDIGNDAQKRTGMMDSDDFKACLISMGYNLSETEFGRIMNIVDPNNMGVITFQAFLDFM
SRETTDTDTADQVMASFKVLAGDKNYITAEELRRELPPDQAEYCIARMAPYTGPDAVPGS
LDYMSFSTALYGESDL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatcattacgatgcgaaccactcgcagagcgatgactacatgcagccggaggatgac
tgggaccgagacctcttgttagacccagcctgggagaaacagcagagaaagactttcaca
gcctggtgtaactctcatctccgcaaggcaggaacacagattgagaatattgaagaggat
tttagagatggactcaaactcatgcttctccttgaggttatttctggtgaacgcttgccc
aaaccagaaagagggaagatgcgtgtacataaaatatcgaatgtcaacaaagccctggat
tttatcgccagcaagggggtcaaacttgtttccattggagctgaagaaattgtggatgga
aatgcgaagatgacacttggcatgatctggacaatcatccttcgatttgccatccaggat
atctctgtcgaagagacatctgcaaaggaagggctcctgctatggtgtcaacgcaagaca
gctccttacaagaatgtaaacattcagaacttccacatcagttggaaggatggccttgga
ttctgtgctcttatccatagacaccgaccagagctcattgactatgcaaagctgcgaaag
gatgacccttacaccaacttgaacacagcctttgatgtcgcagaaaagtacctggacatt
cccaaaatgttggatgctgaagacattgttggtacagcacgtccagacgagaaggcaatc
atgacttatgtctctagcttctaccatgccttttcaggagcccaaaaggcggaaacagca
gccaatcgaatctgtaaagttctcgccgttaaccaggagaatgagcagctaatggaggat
tacgagaagctggccactgaccttctggagtggatccgacgcaccattccctggttggaa
aaccgtgccccggagaacaccatgcaggccatgcagcaaaaactggaggatttccgagac
tatcgccgcctccacaaaccacccaaagtgcaggagaagtgccagctggaaatcaacttc
aacactctgcagaccaaactgcgactcagcaacagaccagccttcatgccatccgaaggc
aagatggtgtcggatataaacaacgcctggggctcgctggagcaggccgagaagggttat
gaagaatggctgctcaatgaaatcaggaggttggagagactggaccatctggctgaaaaa
ttcagacagaaagcagcaatccatgaggcttggagcactggtaaggaggaaatgctgatg
gcaaaggattttgagacagcgaccctgtctgaagtgaaggctatattgaaaaagcacgag
gcctttgagagtgacctggcagctcaccaggaccgtgttgaacagatcgctgcaatcgcc
caggagctcaatgagctggactactgggattccccaagtgtgaatgaaagatgccagaag
atctgtgaccaatgggacaatctaggagccctgacccagaagaggagagatgccttggag
aggacagagaaactcctcgagacaattgaccagttgtatctagaatatgcaaagagggct
gctccctttaacaattggatggaaggtgccatggaggacctgcaggacacgtttattgtt
cacactattgaggaaatccagggattgataactgctcacgagcaatttaaagccaccctg
cccgaggcagaccgcgagcgccaggctatcctgggcattcacaatgaggtatccaagata
gtccaaacctaccacgtcaacatggccggtaccaatccttacacaacaatcgccccacaa
gacattaacaacaaatgggaaaaggttcgacacttggtgcctcagagggaccatgctctg
atggaggaaaatgctcgtcagcaatccaatgagagactgcggaaacaatttgcaacacaa
gccaatgttattggtccttggattcagactaagatggaggagattggtcgcatctccatt
gagatgcatggcacattggaggatcagctgaaccacctccgacagtatgagaaaagcatt
gtcaactacaaaccaaagatcgatcagcttgaaggagaccatcagctcatccaagaggca
ctaatctttgacaacaagcacaccaactacacaatggagcatatcagagtgggctgggaa
cagctgctcaccaccattgccaggacaatcaatgaaattgagaaccaagtcctcaccaga
gatgcaaagggcatcagtcaggagcagatgaatgagttcagggcctcctttaaccacttc
gacagggaccattctggcacccttggagcagaggagttcaaagcctgcctcatcagcttg
gggtacgatattggaaatgacgcacagaagaggactggaatgatggacagtgatgatttc
aaagcttgccttatctccatgggttacaatctgagtgaaacagagtttggacgcatcatg
aacatcgttgaccccaacaacatgggtgtcataacgttccaggccttcctggacttcatg
tctcgagaaaccacagacacagacactgctgaccaagtcatggcctcatttaaagttcta
gctggtgacaagaactacatcacagctgaggagctgcgtcgtgaattacctccagaccag
gcggaatactgcattgctagaatggcaccctacactgggccggatgcagttccaggctcc
ctggactacatgtccttctccacagcactctatggcgaaagtgacctctaa
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