Chiloscyllium punctatum (brownbanded bambooshark): 140476585
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Entry
140476585 CDS
T11285
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04140
Autophagy - animal
cpun04142
Lysosome biogenesis
cpun04145
Phagocytosis
cpun04148
Efferocytosis
cpun05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
140476585 (vps18)
04142 Lysosome biogenesis
140476585 (vps18)
04140 Autophagy - animal
140476585 (vps18)
04148 Efferocytosis
140476585 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140476585 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140476585 (vps18)
Membrane trafficking [BR:
cpun04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140476585 (vps18)
Hops complex
140476585 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_Vps41
zf_RING_Vps8
zf-RING_16
zf-ANAPC11
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-rbx1
DUF5600
aq_1631
DUF1664
DUF4446
RBSN_mid
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
140476585
NCBI-ProteinID:
XP_072425503
LinkDB
All DBs
Position
4
Genome browser
AA seq
975 aa
AA seq
DB search
MSSILDEYEDSQARSRSRPVGLPYQQQRLGVSGIGQSGYVSARLEEEKPIFSKQRIDFSP
PSAINHLVVCNNQLCMCLGKETLLRIDLGKPDQPNQIELGRKDDARIHKLFLDPSGSHLL
ISLTSSECLYVNRNSQKMRSLSRWKGHLIESVGWNKHMGSESNTGPILVGTSQGQMYEAE
IVVSEDRLFNSSPDQYFKYIYSLEEDGSPAPVCCLEIERSIDARFFVIATTRKRLYQFVG
KAPEASEQQVFQPIFNQYADSLPSFQEFPVSLGYSEISFYTSKLRSSPRSFAWMMGNGVL
YGTLDYSRLDSLLSDMKVWEYSADTESPRSIVLTQFHFLLLLSDRVKAICTLNGQLVFED
VFPDKFGRLLRMVKDSVAGLIWIYTEKAVFRYHVQKESRDVWQMYMNMGKFDLAKEYCKD
RPECLDAVLAKEADHCFQNKKYVESAKYYALTQRYFEEIALKFIEAKQEEALKEFLLKKL
KNLKLEDKTQMTLLVSWLTEIYLNWLGMFEGDESKQNQFDATREEFRQFLSSSKIKECLL
NNRSTIYDLLASHGNVVDMVFFSVIMQDYERVVAHHCQHDDYSAALEVMSKYQDPSLFYK
FSPVLMQHIPKLVVDAWITMRRRLDPKSLIPALVNYSQIGSSEQIGEAIRYLEFCVHDLN
VTDQAIHNYLLSLYAKYKPKALLWYLEQAGSDTNHIHYDLKYALRLCAENGHRQACVHIY
KTMELYEEAVDLALQMDVDLAKSCADMPEEDEELRKKLWLKIARHVVQEEKDVKKAMVCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLQEYNKHIDELKQEMEEATESAKRIREDI
QEMRNKYGVVESQEKCASCDFPLLNRPFYLFLCGHMFHSDCLLQEVIPHLSPFKQTRLEE
LQKKLVTSNQVKSRQRPKEGGEGSHKGQQSRDQIKADIDDIVAAECIYCGELTIKSIDKP
FINPQKYEEENNSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgatcctggatgagtatgaggattcccaggcccgatcccgttcccggcccgtc
ggactcccctaccaacagcaacgcctcggtgtttcaggcatcggccagtcaggttacgtc
agtgcacgccttgaagaggaaaagccaatcttttccaaacagaggattgatttcagccct
cccagtgccatcaaccaccttgtggtatgcaacaaccagctgtgtatgtgtttaggcaaa
gagactcttctcaggattgatttaggaaaacctgaccaaccaaaccagattgaactgggg
cgcaaagacgatgccaggatccacaaattgtttctggacccctctgggtcccatctcctg
atcagccttacgtccagcgagtgtctttacgtgaacaggaattctcagaaaatgagaagc
ctctcccgctggaagggccatttaattgagagtgtaggctggaacaagcacatgggcagt
gagagcaacactggccccattctggttggaaccagccaaggtcagatgtacgaagcagag
attgtggtctcagaggatcggctgtttaactctagtcctgatcagtacttcaagtacatt
tacagcctggaagaggacggctccccggctcccgtctgctgcctggagattgagcgcagc
attgacgcgagattctttgtcattgccaccactcgcaagcggttgtaccagtttgtcggg
aaggccccagaggccagtgaacagcaggtattccagcccatcttcaaccagtatgctgac
tctttgcccagtttccaggagttcccagtcagcctgggctacagtgagatctctttttac
acctccaaactgcgatccagtccacgctcctttgcctggatgatgggaaatggtgtgctg
tacggcacccttgattacagcaggcttgactcccttctgagtgacatgaaggtctgggag
tactcggcagacaccgagtctccccgctctattgtcctgacccagtttcacttcctgctg
ctactctctgacagggtgaaggccatttgcacgctgaacgggcagctggtcttcgaggac
gtgttccctgacaagtttggccggctcctgcggatggtcaaggattctgtggctgggttg
atctggatctacacagagaaggctgttttccggtaccacgttcagaaagaatcacgggat
gtctggcagatgtacatgaacatgggcaagtttgacctggcgaaggaatactgcaaagac
cggcctgagtgcctggatgctgtgcttgccaaggaagccgaccactgctttcagaacaag
aagtacgtggaaagcgccaaatactacgctctgacgcagaggtattttgaggagattgcg
ctgaagttcatcgaagccaaacaagaggaggcactgaaggagtttctgctgaaaaagctg
aagaatctgaagctggaggacaaaacacagatgaccttgttggtgagctggctcactgag
atctacctgaactggctgggcatgtttgaaggcgatgagagcaagcagaaccagtttgac
gcgacgagggaggagttccgacagtttctgagcagctccaagattaaagagtgcctgctc
aacaaccgctcgaccatctatgacctcttggctagccatggcaacgtagtggacatggtg
ttcttctctgtgatcatgcaggattatgagcgggttgtggcccaccattgccagcatgat
gactacagtgcagctctggaggtcatgtccaagtaccaggacccttctctcttctataag
ttctcccccgtcctcatgcagcacattcccaagctggtggtggatgcatggatcaccatg
cggaggcggctggatcccaagagcctcatcccggcgctggtcaactacagccagatcggc
agctcggaacagattggtgaagccatccgctacctggagttctgcgtacacgatctgaat
gtcaccgaccaggcaattcacaattacctgctgtctctgtatgccaagtacaagcccaag
gccctgctgtggtacctggaacaagctgggtcggatacaaaccacattcattatgacctg
aagtacgcactgcgcctgtgtgcagagaatggtcaccgtcaggcctgtgtgcacatttat
aagacaatggaattatacgaagaggcggtagatcttgcactgcagatggatgtagatctt
gctaagtcatgtgcagacatgccggaggaagatgaggagcttcgtaagaagctgtggctg
aagattgcccgtcatgtagttcaggaagagaaggatgtcaagaaggccatggtttgttta
tccagctgtaacctgctgaagattgaagacattctgcccttctttccagattttgtgact
attgaccattttaaggaggccatctgcagctccctgcaggagtataacaagcacatcgac
gagctcaagcaggagatggaggaggcgacagagagtgccaaacgaatccgggaagatatc
caggagatgagaaacaagtatggtgtggtggagtctcaggagaaatgtgcctcgtgtgac
ttcccactgctgaaccgcccgttctacctattcctgtgtggccacatgttccattcggac
tgcctcttacaagaagtgattcctcacctttcccctttcaagcagaccaggctggaggag
ctgcagaaaaagctggtgaccagtaaccaagtgaagtcccggcagcggccaaaggaagga
ggagagggcagtcacaagggacaacagtcccgtgatcaaatcaaagctgacattgatgat
attgtggcagccgagtgcatttattgtggagaactgacaattaaatcaatagacaaacct
tttatcaacccacagaaatatgaagaggagaataacagctggctgtaa
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