Chiloscyllium punctatum (brownbanded bambooshark): 140476601
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Entry
140476601 CDS
T11285
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140476601 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140476601 (fip1l1a)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140476601 (fip1l1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
140476601
NCBI-ProteinID:
XP_072425545
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Position
1:76950215..77059643
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AA seq
555 aa
AA seq
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MSADAENMPKEAGSGSAGLGEDEEHWLYGDENDPNKQEEAAPVDSVDAPAPDSMEETRGN
GVMRANPAAEGEDESDSDSDDDDDDVQVTIGDIKTGAPQYTYGVTPVNLNIKSSGRLYGS
GTKAGKGVDLDAPGDINGMPALEIDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEK
QKRLRMGLEPLPLASTTNRITVQQGRTGNPEKEPEVPPPKMDFPSPPNRFRAGPPPNRRL
SGSIEVIGGQLITIARVEGRRRDRGGADENAIQVLGDHPVSEFNNNTSSKRPPFIPPGAP
PPHLTGPPPPFLPPPPPVNTGPPILHPPGMPLTTPPPGFLPPPGAPPPSLVPLESGPPTY
NNRTTAAFGYASNDYANLTYPNIPVSSSWSTLIDNNNKQPSQQQQSHWDYYPRRERDRDR
DRERERTRERERDRDRERDHDRERDRSPSSSVYNGDEGRYRHRDYSSDKSYDRDYHHRDK
VSRDKEDRHKERRHRDKEEGRHKSSRSSSRRRHDSEEVDGHKRHKHKKSKRSKEDKEASE
EISQEPEPSEAASSN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggatgcggagaacatgccgaaggaggccggctcgggcagtgcagggctcggg
gaggatgaagagcactggctgtacggagatgaaaacgacccaaacaaacaggaagaggcc
gcgccggttgacagtgtcgatgcacctgctccagactcgatggaagaaactcgggggaat
ggagtgatgagagcgaatcctgcagctgaaggggaggatgaaagtgacagtgatagtgat
gacgatgatgatgacgttcaagtaaccattggtgatattaaaactggagcaccacagtat
acctatggagtaacacctgtaaatcttaatattaagtcctcaggaagactttatgggtca
gggacaaaagctggaaagggtgttgaccttgatgcccctggtgacatcaatggaatgcca
gctttggaaatagacttggattcttttgaagataaaccttggaggaaaccaggtgctgat
ctttctgattacttcaattatgggttcaatgaggagacttggaaagcttattgtgagaaa
cagaagcgactgagaatgggtcttgaaccccttcctcttgcctcaactacaaacagaatt
acagtacaacagggcagaacaggaaatcctgagaaagaaccagaggtgccaccccctaag
atggatttcccttctccaccaaatcgtttccgggcaggacctccacccaacagaaggttg
tctgggtccatagaggtaattggaggtcagttaattaccattgctcgtgtggagggccga
cgtcgagacaggggtggagcagatgaaaatgccattcaggttcttggagaccatccagta
tccgaatttaataacaatacctcttcaaaacgtcctccgtttatacctccaggagcacct
ccacctcatctgactgggccacctcctccattcttgccaccaccacctcctgtcaatact
gggcctccaattcttcatccaccaggaatgcctttaacgacaccaccaccaggcttcctg
cctccacctggcgctccaccaccttcacttgtgccattagaaagtggacctccaacatac
aacaaccgtactactgctgcatttggttatgcaagcaatgattatgctaatctgacgtat
cccaatatcccagtttcatcctcctggagtactttaattgataacaacaacaagcaacca
tcacagcaacagcaatcgcattgggattattacccacggagagagagggacagggatcgt
gatcgggaacgagagcgcacaagggagagagaacgagatcgggacagagaacgggaccat
gaccgagagcgtgaccgcagtccgagttcaagtgtttataatggtgatgaaggtcgatat
aggcacagagattattcatctgataaaagctatgatcgtgattaccatcatcgggacaag
gtcagcagggacaaagaggatcggcataaagagcgccgacaccgggacaaagaagaaggg
agacacaaatcttcccgaagcagcagcagacgacgccatgatagtgaagaggtggatggc
cataaacgacataaacacaagaaatctaaacgaagcaaggaagataaagaagccagtgag
gaaatttcccaggaaccagagcccagtgaggctgctagcagtaattaa
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