Chiloscyllium punctatum (brownbanded bambooshark): 140476855
Help
Entry
140476855 CDS
T11285
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140476855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140476855
03036 Chromosome and associated proteins [BR:
cpun03036
]
140476855
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140476855
Coactivators
SAGA/TFTC/STAGA complex
140476855
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140476855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
140476855
NCBI-ProteinID:
XP_072425817
LinkDB
All DBs
Position
5:6918068..7054263
Genome browser
AA seq
802 aa
AA seq
DB search
MPTPSVPRREAESGGLPVPASSTPSNSNNNNDDSSPAGSCPPPPQNGPGPGPGPGPEPGP
AGTPASSSPAASLPQPQPQPQPQPQRPVPAPSPAPTPLRVMPLPERQNQAGPLSGGGGGG
MPPSPALMKTAAVTTSTAATAAATGSPLPASRAPTVTVQRINVSSPHIKTSSPLNQVTVP
LLQNLQVPAGMVLVRSDSGQLVLVPQKVIAQAQAKARAQGAGNVSSAVSTGTPSVRISTI
QATGTQRIPNQVKTSTQQMNQFQAGGQTNAAPQRITVVQQQAAGGAIMPKTASTIVQKQT
SAPADRSVTVPVVQTTASPETLENVKKCKNFLATLIKLASSGSQSPQMSSNVKALVQKLL
DGKMEVEEFTEQLYKELKSSPQPYLVPFLKRSLPDLRKLMPNSQAFIQQCLQKPATPAAP
IAASSGGSKQISPGQASKSVTVMSASQPAKVLQTLPSPQVVVQQSGVVIKSQASPLPKTQ
TVSLQKPPNHIIVPVSQNQAKETKAGAATLVTKVTLSQVNKNPTNVLIRASPGQILKKEA
GGTMFREEDDINDVASMAGVNVNEERARILASNSELVGTIIRSCKDEAFLSSASLQRKAL
EIGKTHGVTEVNSDVLSTISHATQEHLRELVEKLTVIAQHRMMTYKDNDRYSLLNDTRSQ
LKFFEQLDRLEKQRKDEDEREALLRLAKSRAKHEDPEQLRLKQKAKEMQQLELAQLQQRE
ANLAALAAIGPRKRKMTDSPGLRTGNEGLGGNGNAPGGLRATPARPYLRQRVTRVNLRDL
ILCLEQDQARKHSLLLYRAYLK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccccgagtgtcccgcggcgagaggcggagagcggcggcctccccgtcccggcc
tcctccaccccctccaacagcaacaacaacaacgacgacagttccccggccggctcatgc
ccaccgccgcctcagaatgggcccgggcctgggcccggacctggacccgagcccgggcca
gcggggacaccggccagctcttcccccgccgcctcccttccccagccccagccccagccc
cagcctcagcctcagcggccggtcccggctccctctcctgcaccgacccctctccgagtc
atgccgctccccgaacgtcaaaatcaggccgggcccctttcaggaggaggcggcggcggg
atgcctccctccccggccttgatgaagaccgcggcggtaaccaccagcacagcggcaact
gcagcagcaaccgggagcccactcccagcctccagagctcctactgtcaccgtccaaagg
atcaatgtctcttccccgcacatcaaaacctcttccccgctcaaccaggtcacagtcccc
ctcctgcagaacctccaggtgccagcaggcatggtgcttgttcgaagtgacagtggacag
ttagtgttagttccacagaaagtcattgctcaagcccaggctaaagcccgagcacaagga
gctggaaatgtctcatctgcagtgtctactggcacaccctcagtccgaatttctacaata
caggccactgggacccagaggattcccaatcaagtgaaaacttctacccaacaaatgaac
caattccaagctggaggccagacaaatgctgcaccacaacgcatcacagtcgtgcagcaa
caggctgcaggtggagcgattatgccaaagactgcatcaacaatcgtccaaaagcaaaca
tcggcaccagcagaccgttccgtcactgtgcctgttgtgcagacaactgcttctccggaa
actttggaaaatgtgaagaaatgcaagaacttccttgcaacattaattaagctggcttcc
agtggttctcagtcgccacaaatgtctagtaacgtgaaggctttagtgcaaaaactgttg
gatggaaagatggaagtagaggaattcacagaacaattatataaagagcttaagtcctca
ccacagccttatcttgtgccttttctcaagcgaagtttaccagacttgcggaagttgatg
ccgaattctcaggctttcattcaacagtgcctacagaaacctgcaactccagctgctccc
attgcggcttcgtctggagggtcaaaacaaatcagcccagggcaggcatcaaagagtgtc
acagtaatgagtgcttcacagccggcaaaagtcttacagactctgccgtcgccacaggtg
gttgtccaacagtctggagtagtaataaagtcacaagcaagccccctgccaaagacccag
acagtgagtttgcaaaaacccccaaaccatatcattgtccccgtatctcaaaatcaggcc
aaagaaactaaagcaggtgctgcaacattggtcacaaaagtaacgctctctcaagttaac
aaaaatccaacaaatgttctaatacgagcctcacctggtcaaatactaaaaaaagaagct
ggaggcacaatgttcagggaggaggatgacatcaatgatgtggcctccatggctggggtt
aacgtcaatgaagagcgtgcacgcattcttgcatcaaactctgaattggtgggcactatt
atccggtcctgtaaagatgaagcatttctctcctctgcatccctgcagagaaaagctttg
gagatagggaagacacatggtgtgacagaggtgaattctgatgttttgagcaccatatct
catgccacgcaagaacacttacgggaactcgtggaaaagctcacagtaattgcacagcat
cggatgatgacatataaggacaatgaccgatacagcctattgaatgatactcggtcacaa
ctgaagttttttgagcagttggatcgactggagaagcagcggaaagatgaagatgaaaga
gaagcactgctaagactagcgaagagtcgagccaagcatgaagacccagaacaacttagg
ttaaagcaaaaagccaaagagatgcaacaattagaacttgcgcagctgcagcaacgggaa
gcaaatcttgcagcactggctgccatcggaccaaggaaaagaaaaatgactgattcacca
ggtctccgaacaggaaacgagggcttgggcggcaatgggaatgcgcctggtggtcttcga
gcgacaccagcccgaccctacctacggcagagggtaacacgagtcaatctcagggatctc
atcctgtgcttggagcaggaccaagcaaggaaacactcactgcttctgtaccgagcctat
ctcaagtga
DBGET
integrated database retrieval system
