Chiloscyllium punctatum (brownbanded bambooshark): 140476861
Help
Entry
140476861 CDS
T11285
Name
(RefSeq) desmocollin-1-like
KO
K07600
desmocollin 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140476861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140476861
Cell adhesion molecules [BR:
cpun04515
]
Cadherins
Major cadherins
140476861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
RibLong
CADH_Y-type_LIR
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
140476861
NCBI-ProteinID:
XP_072425832
LinkDB
All DBs
Position
5:complement(8700117..8743138)
Genome browser
AA seq
920 aa
AA seq
DB search
MAALIILLLMLTDFGEASIDKPVVVVTVQGPNIKENQNISKVDLKHCCKDISHISTDDPD
FGVKPNGYLFASRALHINEQRSFNIHLRDSLMLVCCTIRVHLSIQPNLQHELKERVRSKR
AVILRRQKRRWRPLPFSITENDAGPFPKYVQTIKSEYEQNYTLLYKITGQGVDHPPLGFF
RIEPETGKIFVLRTVDREEYPSFSLTGTARTKEGFVPEYPLDLTVKVNDVNDNIPTFNEE
TFIANVAEGSPVGTSFFKLTATDLDEPNTLNTLLRYKVLSQEPASKFGQLFSVDERTGEL
KTQTDKLDREEQDTYTLTVEVRDMEGKPYGLFSTGTVVVHVTDVNDHTPTFRTNKYMVWA
NESVSDVMILRMPVDDEDMKDTNASRAVFTIINGDSDGNFKVITDPKTNEGLLYIVKPLD
CEKTPKIPLEIAVENAVPLTGSSASKQTTSVIVNVVNIDEGPEFEPAVKQIWTKENVEIG
HVLGSYVAKDPETRSSDGIRYRKLNDPAGWVSIDSQTGEIRTTAVLDRESEFVKNNKYNV
TVLAIEDRAPSRTGTGTVVINLDDVNDHVPLIRNNQLYICENGQRQFVNVSAEDSDIAPN
SAPFTFLLPDEPPEIKRKWTITNQMGTYAYVKPVNKLPPGYYEVPVTVQDQQHQGKEQTL
KITICECPNNVNCAGRLASGRAVLGGMGILVMLLAALLLLCLLLAAVALYCGGGKVPQPV
THTGQYQQNLLVSNDEGGGQQDKDLDALDITLPRKSPFATESIPPLGNQETGFGQQTQIS
SVYVDGVQGPHLGTVVTDEMVNITGGGIYDESVSRHHTLHLQNDIMHQDLTTTDGYRLDR
RNSHHLMDLLRSRVDQVYEDEELRDQAIHGDLVHEYRYEGAPSVNGSVGCCSDVRENMEQ
NYLNDLRPKFGTLASMSLKR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgatcattttgctgctgatgctcacagactttggtgaagcaagcatcgac
aaacctgttgttgttgtaactgtgcagggtccgaatattaaagaaaaccaaaacatttca
aaagtggatttaaagcattgttgcaaagatatatcacacataagcactgatgatccagac
tttggtgtgaagcctaatggctacttgtttgcatctcgagctctgcatatcaatgaacaa
cggagttttaacattcatctacgagattcactgatgctggtgtgttgcacaattcgggtc
catttgtcgattcagccaaacttgcagcatgaattaaaagaacgtgttcgatccaagcgt
gcagttatactgcgacgtcagaaacggaggtggagacctcttccattttctatcactgag
aatgacgctggacctttccccaagtatgttcaaactataaaatcagagtatgagcagaac
tatacattattgtacaaaattaccggacaaggagttgatcatcctccattgggttttttc
cgtattgaacccgagacgggtaaaatatttgtgttacggaccgtggatcgtgaagagtac
ccgtcgtttagccttactggaacagcaagaaccaaagaaggatttgttcctgaatatccg
cttgatctgactgttaaagtaaatgatgtgaatgataatatccctacatttaatgaagag
acgttcattgcaaatgtagctgaaggttcaccagttggtacttctttcttcaagcttaca
gctactgaccttgatgagcccaatacattaaatactctgcttcgttacaaggttctgtct
caggaaccagcctcaaagtttggccaactattctctgttgatgagcgaacaggcgaactc
aaaacacagactgataaactagaccgagaggagcaggacacttacacactcacagtcgag
gtgagagacatggagggaaaaccttacggattattttctacgggaactgttgttgtgcac
gttactgatgtgaatgaccatactccaacatttaggaccaacaaatatatggtttgggct
aacgagagtgtaagtgacgtgatgatcctccgaatgccagttgatgacgaggatatgaag
gacaccaatgcaagcagagctgtgttcactatcattaacggggacagtgatggaaatttc
aaagtcataactgatcccaagaccaatgagggtctcttatacattgtaaagcccttagat
tgtgagaaaacaccaaaaatcccattggaaattgcagtggaaaacgcggtccctctgact
ggaagttctgcttcgaaacaaactacttcagtaatagtcaatgttgtgaatatagacgaa
ggtccagaatttgagcctgctgtcaaacaaatctggacaaaggagaatgtggaaattgga
cacgttttgggctcttatgtagcaaaggatcctgagactcgaagcagtgatggcatcagg
tacaggaaactaaatgaccctgcaggttgggtttccattgattcacaaactggtgagatc
agaactactgctgtgttggacagagagtctgaatttgtaaaaaataataagtacaatgtt
acagtgctggccatagaagacagagctccttcaaggacgggaactgggacagtggtgatc
aacctggatgatgtgaatgaccacgttccactgatccgtaacaatcagttgtacatttgt
gagaacggacagcgtcagtttgtcaatgtgtcggctgaggattctgatattgcgcctaat
tctgctccatttacatttctcctgccggatgaaccaccagaaattaaaaggaaatggacg
atcaccaaccaaatgggaacctatgcctacgtgaagccagtaaataagctcccacctggt
tattatgaagttcctgtcacagttcaggaccagcagcaccaaggaaaagagcaaaccttg
aagattacgatctgcgaatgccccaacaatgtaaattgtgcaggaagacttgcttctgga
agagctgtccttggtggaatgggaatccttgtgatgttgttggctgcactgttactactt
tgtttgctcctggctgctgtcgctttatattgcggaggtggtaaagttccacaacctgtg
acccatacaggtcaatatcaacaaaatctcctcgtctcgaatgatgagggcggtggtcag
caagataaggaccttgatgcactggacatcactctgcctcggaaaagtccatttgcaacc
gaaagcatcccacctcttggcaaccaagaaacaggatttggacaacagacccaaatctct
tctgtctacgtggatggagtgcaaggaccacatttagggacagtggtgactgatgaaatg
gtgaatataactggcggaggtatttacgatgaatcagtgagtagacatcacacactgcat
ctccagaatgacataatgcatcaagatttgaccacaacggacgggtacagactggaccgg
agaaacagccatcatctgatggacctccttcgttcacgtgttgaccaggtatacgaagat
gaggagctgagagaccaagccattcatggtgacttagtacatgaataccgatatgaagga
gctccttcagtcaatgggtctgtcggctgttgcagtgacgtgagggagaacatggaacaa
aactacttgaacgatctgagacccaaatttggcactttggccagcatgtctttaaaaaga
tga
DBGET
integrated database retrieval system
