Chiloscyllium punctatum (brownbanded bambooshark): 140477098
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Entry
140477098 CDS
T11285
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140477098 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpun04990
]
140477098 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
cpun04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
140477098 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
V-set
Pur_ac_phosph_N
C2-set_2
Ig_J_second
Tissue_fac
CRLF2-like_D2
C2-set_3
Ig_VEGFR-1-like_5th
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
140477098
NCBI-ProteinID:
XP_072426473
LinkDB
All DBs
Position
5:56376622..56507168
Genome browser
AA seq
1630 aa
AA seq
DB search
MSSLSLPFYQKHHRHYDRDYRNTQLSSTMQEYRQEEKRSTATHSHRVRSKFSDEMLETSS
GSPQMKRAKQDYYSKGKENEAVDYIVPVFRGCHEYFSGTTSSKDERTKQSKSSHFAGESH
SALSNTIEEHNIEKSAMHKSRKVAIRESAERISLNKEIYDTQDFHKRLREDSLLRLPEFI
IKPRSHTVWEKQNVKLHCTVSGWPVPRVTWYKNNVSINVHTDPGKYIIDSKYGVHSLEIN
NCDFDDTAQYRASAMNAKGELSAFASVVVKRFKAEHGDLSFHPGRIAPPSYDYFPGDPHM
KFEVHFVDKFNVSIGKEGDTLSLGCTVIVHPNLKRFQPEIQWWRNGIQLLPSKWVEMHWS
GETATLTFTHLNKEDEGLYTIRVLTKSGYEVHSAYVFVRDADAEVAGAPGAPLDVYCLDA
NKDYVIVTWKQPAVDGGSSILGYFVDRCEVGTNHWVQCNDTPVKFARFPVTGLVEGRSYI
FRVRAVNNVGISRPSRVSEPVAALDPADKARLKGIPLAPWTGQIIVTEEEPAEGVVPGQP
TELAVTEATRNYVVLSWKPPGQRGHEGIMYYVEKCVAGTEDWQRVNPEIPVKSPRFALFD
LAEGKSYRFRVRSANSAGISEPSEPTEFTEVTDKLDVPKAPSHVVPSRNTDTSMVVSWEE
SKDAKELVGYYIEASISGSGKWEPCNNKPVKGKRFICHGLQTGQLYKFRVRAVNAAGLSQ
FSHESEALEVKAALGGGVPHGVFPEQSGNIGGLTDSSARWDGKHEASQLARDTLLSCDAV
LNRRLLPTGYDNFPCIEPDTPKEVNAEWTSKSNLRSPEVQDMYEEGPKNKDKHDKGLKMQ
DMHEKGPKVQDMYKKGSKVEDKYEKGPKIQDMHKKKEKLAAPAPPYGISVLESVRDSMVL
GWKQPKFQGGADITGYFVDYREIIDGIPGKWKEANIKAITERAYRIHDLKENMVYQFQVR
AINMAGVGLPSLPSEKFTCEEWTIAVPGPPHDVMYTEVRNNSLVLLWKAPIYSGRSEVTG
YYADVREADADDEKWRSVNEKEISKRYIKVQGLKEGVKYVFRVRAVNRAGVGKPSDLTEP
VTAETPPGTKEIAVNVDDDGVISLTFECADMAEGSKFIWSKNYEDLIDSSRVTMETKGGK
TKIIFNDPGKDDLGIYSCVVTETDGVSSSYAIDEAELLRLLELSHEHKFPVVPLKSELAV
ELLEKGQVRFWLEAERLSPNGQCKFVFNDKEIKNDEKYKIKVDHKTGLVEMIMDKLEDIN
EGTYTVQLQDGKASNQSSLVLIGDVFKNLQKEAEFQRGEWLRKQGPHFVEYLKWEVNNDC
SVLLKCKVANIKKETSIIWYKDDREIMFDEKHDFKDGVCTLLVQQFSKKDAGVYEIVLKD
DRGRDSSTLRLLEKAFGDVISEVCRAAAQTATDLKVQSTEHGIRIYSFVTYYLDELKIIW
YHKDTKLASTDRVKSGVTGEQLWLQINEPTEKDKGRYTLELFDGKAGHKKSVELSGTVFD
EAFAEFQRLKQAAIAEKNRARVIGGLPDVVTIQEGKSLNLTCNVWGEPVPTVSWLKNDRE
LLGDAHLLLKFDSGKFASFTITDVRTTDSGKYSILVKNKYGTETGDFTVSVFIPEDEEVQ
VEQEKAAKKK
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgttgtctttacctttctaccagaaacaccaccggcactatgaccgcgattat
cgcaatacacagctatcgtccactatgcaagagtaccgccaagaggaaaagcgcagtact
gcaactcactcccacagagtcagatccaagttttcagatgaaatgttagaaacttcttct
ggaagccctcaaatgaagagagcgaagcaggactactactctaaggggaaagagaatgaa
gctgttgattatatagtgcctgtcttcagaggatgccatgagtacttcagtggaactacc
agctcaaaggatgaaagaaccaagcagtcaaaatcaagtcatttcgctggagaatctcat
tctgccctaagtaatactattgaagaacataatattgagaagtctgccatgcacaagtca
agaaaagttgccatccgggaatctgctgaacgcatttcactgaataaagagatttatgac
actcaagattttcacaaaagactgagagaggacagcttgcttcgtttgcctgagtttata
atcaagccaaggtcccacactgtctgggagaaacagaatgtaaagttacattgcaccgtc
tcaggctggcctgttcctcgagttacatggtacaagaacaatgtgagcatcaatgtccac
actgatcctggaaaatacatcatcgacagtaaatacggtgttcattccttggaaattaac
aattgtgactttgatgacactgctcagtatcgtgcttcagccatgaacgcaaagggagaa
ctttcagcttttgcatcagtagttgtgaaaagattcaaagcagagcatggtgatctctca
ttccaccctggaagaattgcacctccttcatatgactacttccctggtgaccctcatatg
aagtttgaagtgcactttgttgataagtttaatgtgtcaattggcaaggaaggtgacaca
ttgagtttgggctgcactgtcatcgttcaccctaacctaaagcggttccagcctgagatc
cagtggtggcgcaatggtatccagctactgccatccaaatgggttgagatgcactggagt
ggtgaaactgctacactgacttttactcacctaaataaggaggatgaaggattgtacact
atacgtgtgttgacaaaatctggctatgaagttcatagtgcatacgtgtttgtcagagat
gctgatgcagaggttgcaggtgccccaggagctcctttggatgtctattgcttagatgcc
aataaagattatgtcattgtaacctggaaacaaccagcagttgatggtggaagctccatc
cttggttactttgttgacagatgtgaagtaggaaccaatcattgggttcagtgcaatgat
accccagtgaagtttgccaggtttcctgtcactgggttggtagaaggtcgttcctacatc
ttccgtgtgcgtgctgttaataacgttggaattagtagaccatcccgtgtatctgagcct
gttgcagccttggatcctgctgataaagcaaggctgaagggaatcccattagccccctgg
acaggacagattattgtaacagaagaagaaccagcagagggtgtggtgcctggacaacct
acagaactagctgtgactgaagccacgaggaattatgtggtcctcagctggaagcctcct
ggtcaacgtggccacgaaggaatcatgtattatgtagaaaagtgtgttgcaggcactgag
gactggcaaagggttaacccagagatccccgtgaagtctccacgatttgcattgtttgat
ctggctgagggtaaatcctatcgtttccgtgtccgctctgctaattctgctggcattagt
gagccttctgagccaacagaatttactgaagtaacagacaaacttgatgttccaaaagct
ccaagtcatgttgtgccttcgaggaacacagacacttcgatggttgtcagttgggaagag
tcaaaagatgcaaaggaattagttggctactacattgaagcaagcatcagtggatctgga
aaatgggaaccatgcaacaacaaaccagtgaaaggcaaaagatttatttgtcatggatta
caaactggacagttatacaaatttcgagttagggctgtcaatgcagccgggcttagtcaa
ttttcacatgagtctgaggctctggaagtcaaagctgctttaggaggaggagtgcctcat
ggtgtgtttcctgaacaaagtggtaacattggtggactaacagacagcagtgcacgctgg
gatggcaagcatgaggcatctcagctcgcacgtgacactttactaagttgtgatgctgtg
cttaacagacgcctgctgcccactggctatgataattttccatgcatagaaccagataca
ccaaaggaggtaaatgcagaatggacaagcaagtctaatctcagaagcccagaggtacag
gacatgtacgaggagggcccaaagaataaagataagcatgacaagggcttaaagatgcaa
gacatgcatgaaaagggcccaaaggttcaagacatgtacaagaagggttctaaggtagaa
gacaaatatgagaaggggcctaaaatacaagatatgcacaagaagaaggaaaaactagct
gctcctgcaccaccttatgggatttcagttcttgaaagtgttcgtgactccatggtgttg
ggatggaaacagcctaaattccaaggtggtgctgatattaccggctactttgtggattat
cgtgaaattattgatggtattcctggaaaatggaaagaagccaatatcaaagctatcact
gagcgagcatacagaatccatgacctgaaggaaaatatggtgtatcagttccaagtccgt
gcaataaacatggcaggtgttggccttccatctctaccgagtgagaaatttacatgtgaa
gaatggactattgctgttccaggaccacctcatgacgtcatgtacacggaggtcagaaat
aactcactggtactgctctggaaagctccaatctattctggccgcagtgaggtgactggg
tactatgctgacgtacgagaggcagatgcagatgatgaaaagtggagaagtgtcaacgaa
aaggaaatatcaaagagatacatcaaggtacaaggtctgaaagaaggtgtgaaatatgtt
ttccgtgtgagggctgtgaacagggcaggagttggaaagccatctgatttaacagagcca
gtcaccgcagaaacacctccaggtactaaagagattgctgtcaatgtggatgatgatgga
gttatttctttgacctttgaatgcgctgacatggctgagggttcaaagttcatttggtct
aaaaattatgaagacctcattgactcatcaagagttacaatggagacaaaaggcggaaag
acaaaaatcattttcaatgacccagggaaggatgacttgggtatctactcctgtgttgtc
actgaaacagatggagtttcttccagctatgccatagatgaagcagagctgctccgtctg
cttgaacttagtcatgaacataaattcccggttgtgcctctgaagtcagagctagcagtt
gagctgctggagaaaggacaagtgcgcttctggttggaggctgaacgtctctctccaaat
ggacaatgtaaatttgtatttaatgacaaggagattaaaaatgatgagaaatataaaata
aaggtggatcataaaactggtttagtggaaatgataatggacaaattggaggatataaat
gaaggcacttatactgtacagctccaagatggtaaagcaagcaatcaatctagtctcgtt
ttaattggagatgtgtttaagaatctgcaaaaggaagcagaattccagagaggggagtgg
ctcaggaaacaaggtcctcattttgttgagtatctcaaatgggaagttaataatgactgc
agtgtacttctgaaatgcaaggtggctaatattaaaaaagagacctcaatcatctggtac
aaggatgatagagagataatgtttgatgagaagcatgacttcaaggatggagtgtgtact
ttgctggttcaacagttttcaaagaaggacgctggtgtttatgaaattgtgctgaaggat
gacaggggaagagattcaagtacgctccgactgcttgaaaaagctttcggtgatgtgata
agtgaagtttgccgtgcagctgctcaaactgcaacagatctgaaggtacagagtacagag
catggtatcagaatctactcttttgttacttactacctggacgagttgaagatcatctgg
tatcacaaagacacaaagcttgcatccacagaccgggtaaagagtggtgttacaggagag
cagctctggctgcagattaatgaacccactgaaaaggataaaggccgatacactcttgaa
ctctttgatggaaaagctggacacaaaaaatcagttgaactatcagggacagtttttgat
gaagcctttgcagaattccagaggctgaaacaggcagcaattgctgaaaaaaatcgtgct
cgtgttatcggaggtttgcctgatgttgttacaattcaagaaggaaagtcacttaacctt
acttgtaatgtctggggagaacctgtgcctacagtttcctggctgaagaatgatagagaa
ctgctaggtgatgctcatctactactgaagtttgactcaggaaaatttgcttctttcact
atcaccgatgtcagaaccacagactctggcaaatacagcatcctcgtaaaaaacaaatac
ggcactgaaacaggcgactttactgtaagtgttttcatccctgaggacgaagaagtacaa
gttgaacaggaaaaagcagcaaagaaaaagtga
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