Chiloscyllium punctatum (brownbanded bambooshark): 140477149
Help
Entry
140477149 CDS
T11285
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140477149 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpun01009
]
140477149 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140477149 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cpun03029
]
140477149 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cpun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140477149 (rb1cc1)
Membrane trafficking [BR:
cpun04131
]
Autophagy
Autophagosome formation proteins
ULK complex
140477149 (rb1cc1)
Mitochondrial biogenesis [BR:
cpun03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
140477149 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
ubiquitin
TBK1_ULD
Pneumo_M2
Motif
Other DBs
NCBI-GeneID:
140477149
NCBI-ProteinID:
XP_072426619
LinkDB
All DBs
Position
5:complement(70049198..70258336)
Genome browser
AA seq
1613 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQAKYKIATQHQVLVVNGGECMVADRRVC
SYSAGTDTNPIFLYNKEMILCDRAPTIPKTTFSAENEMGLKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTHSFQKLLAKFENAYISYEH
SVEDIKQKLTNLGTAVSVMAKIPLLECLTRHSYRECQERLKLPTQKGSTEEQSEDVKSTS
SALCSVKPTVNRNSPSSSISFGCSAQNSVIQQEEKDNETIEDRTPKTEAEGESKEVDDQA
FFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPEILQPFLTECHETIVKLDNQNMKAI
KGLEDRLYALDQMIASCNRLVNEQKELAQGFLANQQRAENLKDPSVLPDLCLSHANQLMI
MLTNHKKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQNGEKLQALLRLLTELQER
IRIVEALSNVPQMYCLAVVEVVRRRVFTKHYREWASALVKEGKQFYEAERVKRESFGKLF
RRSFLRNRLFKGLDSWPPSSFCTHKPRKFDFELPDVSLTDLQFLQSCCPSEVQPFLRIPT
LCDFEPLQQHHQILRNLVKAAQSLDEMSQTITDLLTEQKVSLDQTSVTTPTKHKLESTTR
TKATSSRSTSTLSLQGPICPPANVPASLEELSPDSIDAHTFDFETIPHPNLEQVLKQGSI
DMDSLAESPESDFVSAVNEFMIEESSTSPNINSDPQSPEMMLESLYSSVINAIDNRRMQD
TTFGENEDSKEVATLKVHIEKYRLITEMSQLHFTNIKKDLNHFRELVQKEQCDFSSSMKN
VSEELRSLIETVKCRVEVGAKENYQQKLEILRKDYEDQMDKLNVELVTAQQNTDKLKKDL
LELENYIKQKDCEFTEVRTENETLLCLQISKDKEINDLMEGRKKLETEIQELRQSRGSLL
EELNRLHIKADHEMKCLKAELQTLEQSHLKDLEDDLKVRHHQELKKLLADHSKQQEQISK
ENEARLDHMQQSLTIKLQEREQELNELKLNISELSDFRCNLEAELALKEVETEKLKQRLK
ETQVQQEEIAKCQVIKETEKYKEEITDLKHQLQLKHEEYKVGLAEERILMTTEKDQCISD
LLDQQEQEKAVLKTELDKLDVMRQQALDMEVALRGQVEELTTKLKENLKTMEIEREEMMF
EKQRIAFEIEAKYKATIHDLEEEKKQLLNTSQEREEFMRNKMHEDCECKKQALEQELQIK
NQQSESPLEDQSRAESYDPVSSTSVKWTPPASAIADLTGKFQEEKANLLDQLEKRNEELQ
SLKTSLIAEQQTNFNTVLTREKMKREQIINELNDKLRKLTQQQEKDRVLIETLSADRATL
LQEKKQLDEELNRLRSNALVCSAFPSPGTSGAESSVPGPDIPFDSERLAPAAAVAEEIRI
ESAMEASTMTVRGRVEEAEQERGNLGVTCETIQMSEEKHRIMILERTLQMKEEENKRLNQ
RLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLGAL
DLKPVPGSSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggttaacactggaactactcttacatttgacacagaactt
gctgtacagactgttgcagatctaaagcatgcaatccaagctaaatataagatcgcgact
cagcatcaagtgttggtcgtcaatggaggagagtgcatggttgctgacagacgtgtttgt
agctacagtgctgggacggatacaaatcccatatttctgtacaacaaagagatgattctg
tgtgatcgtgcaccaactatacctaagacaacattttctgcagaaaatgagatggggctt
aaggtagaggagtcccttatgatgccggctgtatttcacacagtagcctctagaactcaa
cttgctgtggagatgtatgaagtagcaaagaagctttgttcattctgtgaaagattggtc
catgatgaacatcttcagcatcaaggttgggctgccattatggccaatttggaggactgc
acacattcttttcaaaagctgctggcaaagtttgaaaatgcatacatcagttacgaacat
tctgtggaagatattaagcaaaaacttacaaacttaggcactgcagtctctgtaatggcc
aagataccactgttggaatgcctgaccaggcacagttaccgagaatgtcaggaaagactg
aaattaccaacacagaaaggaagtacagaagaacaaagtgaggatgtgaaatctaccagt
tctgcactttgttctgttaaacctacagttaacagaaattcgccctctagttccatatct
tttggatgttctgcacagaatagtgttatccaacaggaagaaaaggacaatgagaccatt
gaagacagaacaccgaaaactgaagcagaaggtgaatccaaagaagtagatgaccaagct
tttttcaatgtttccttattggattggattaatgtacaagatagaccaaatgatgtggaa
tcactggtcaggaaatgctttgattcaatgaaccgacttgatccagaaatccttcagcca
tttttgacagagtgtcatgaaacaattgtcaaacttgataatcagaatatgaaggctatt
aagggacttgaggacagactatatgccctggatcaaatgatagccagttgtaacagactg
gtcaatgaacaaaaagaattagctcagggatttttagcaaatcagcagagggctgaaaac
ctgaaagacccatcagttcttcctgatttatgtctgagtcatgcaaatcagttaatgatt
atgttaacaaaccacaagaaactgctggatattaaacagaaatgtaccactgctaagcag
gaacttgcaaataacttacaagtcagattgaaatggtgctgttacgtgatgcttcatgca
gatcagaatggtgaaaagctccaggctttgctaaggcttctgacagaactgcaagagaga
atacgaattgttgaggcacttagcaatgttcctcaaatgtactgccttgctgtagttgag
gtagtaaggcggagagtgttcactaaacattacagagagtgggccagtgctcttgtaaaa
gaaggaaaacagttctacgaagctgagcgagtaaaaagggaatcctttgggaaactcttt
cgaagatcatttcttagaaatcgcttgtttaaggggctcgactcttggccaccatcatcc
ttctgtacacacaagcctcgaaagtttgactttgagcttcctgatgtatcattaactgac
ttacaatttctgcagtcctgctgtccttcggaagttcagccttttctcaggattcctaca
ctgtgtgactttgaaccattgcagcagcatcatcaaattcttcgtaatttagtcaaagct
gcccagagtttggatgaaatgtcccagactatcactgacttgttgactgagcaaaaggtg
tctctagatcaaacttcagtaacaacaccaacaaaacacaagttggaaagcacaaccaga
actaaagctacctcttctagatccacatctacacttagccttcagggaccaatctgccca
cctgctaacgttcctgcctcattagaagagctgtctcctgatagtattgatgcccatacg
tttgattttgaaaccattcctcatccaaatttagaacaagttctcaaacaaggatctata
gatatggactcattggcagaaagtccagagtctgattttgtgtcagctgtaaatgaattt
atgattgaggagagctcaacttcacccaacataaacagtgatccacaaagtcctgaaatg
atgcttgaatcattatattcttcagttattaatgccattgataatcgacgcatgcaggat
acaacttttggtgaaaatgaggattctaaagaagttgcaactcttaaagtgcatatagaa
aaatacaggcttatcactgaaatgtctcagttgcattttacaaacattaagaaagacctt
aatcatttcagagagcttgttcagaaggagcagtgtgattttagtagttcaatgaaaaat
gtaagtgaagaattaagaagcctaattgaaactgtaaaatgtagagttgaagtcggagca
aaagaaaattatcaacaaaaattagagattttaagaaaggattacgaagatcaaatggac
aaattgaatgtcgagttggtgactgctcagcaaaatactgacaagctgaaaaaagatttg
ttggaacttgaaaattacataaaacagaaggattgtgagtttactgaggtaagaactgaa
aatgaaactctcttatgtttacaaattagtaaagataaagaaataaatgacttaatggaa
ggtagaaaaaaactagagactgaaatccaagaactcagacaatcgagagggagtttattg
gaagaattaaacagacttcatataaaggctgaccatgaaatgaagtgcttaaaggcagag
cttcagactcttgaacaaagtcatctgaaggatcttgaagatgacctgaaagtcaggcat
catcaagaattgaaaaagttactggctgatcatagcaagcaacaagaacaaatctcaaag
gaaaatgaagcaaggttagatcatatgcagcagtctcttacaatcaagctccaggagcga
gagcaagaactaaatgaacttaaattgaacatatctgaactttctgactttaggtgcaat
ttggaagctgaattggctttgaaggaagtggaaactgaaaaattaaagcagcgcttgaaa
gagactcaagtccaacaagaggagatagcaaaatgtcaagtcataaaagaaactgagaaa
tataaagaagagataactgacttgaagcaccaactccagctaaaacatgaggaatacaag
gtaggccttgcagaagaaagaatactaatgactacagagaaagatcagtgtatttctgat
ctgctagaccagcaagaacaggagaaggccgtacttaaaacagaactagataagttggat
gtaatgagacagcaagcactggacatggaggtagcattaaggggacaagttgaagagctc
accactaaactgaaagaaaatttgaaaacaatggaaatcgaaagggaggaaatgatgttt
gaaaaacagcgaattgcatttgaaatagaagcaaaatacaaagcaactattcatgatctt
gaagaggagaagaaacagctgctcaacacaagccaggaaagagaggaatttatgagaaat
aaaatgcatgaagattgtgaatgcaaaaaacaagcacttgagcaagaattgcaaattaaa
aatcaacagtctgaaagtccacttgaagatcaaagtagagctgagagctatgatccagtt
tcatctacatcagtaaaatggacccctccagcaagtgccattgctgaccttacaggaaaa
tttcaagaagagaaggccaacttactagaccaactagaaaaaaggaatgaagaacttcag
agccttaaaacatcactgatagctgaacaacagactaacttcaatacagtcctaactcga
gaaaaaatgaagagagaacaaattataaatgagttgaatgacaaactgagaaagctaacc
cagcagcaagaaaaagatagagttttgatagaaaccctttctgcagacagagctacatta
ctgcaagaaaagaaacagcttgatgaggagctgaacagactgcgaagtaatgcacttgtt
tgttctgcctttccatcacctggaacttctggagctgagtcctcggttcctgggcctgac
attccatttgattcagaacgacttgcacccgctgctgcagtagcagaagaaataaggata
gaatctgcaatggaagcaagcactatgactgtacggggtagggtggaagaggcagaacaa
gagagaggaaatctcggtgttacctgtgaaaccatccaaatgtctgaagaaaaacatagg
attatgattttagaaagaacattacaaatgaaagaagaggagaataaacgtttaaatcaa
agattgatgtctcagagcatgtcttctgtatcttccagacattctgacaaaatagctatt
cgagatttccaagttggggatttagtacttattatcttggatgaacgtcatgataactac
gttctatttactgttggcccaaccctttatttcttacattcagagtcactgggagcacta
gatcttaagccagttccaggttcttccaggaggccttgggtactgggaaaagtgatggaa
aaagaatattgtcaagctaaaaaggctcaaaacagatttaaagttcctctgggaacaaaa
ttctacagagtgaaagcagtaccctggaacaagaaagtataa
DBGET
integrated database retrieval system
