Chiloscyllium punctatum (brownbanded bambooshark): 140477178
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Entry
140477178 CDS
T11285
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12 isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140477178 (lrp12)
Membrane trafficking [BR:
cpun04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
140477178 (lrp12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
140477178
NCBI-ProteinID:
XP_072426705
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Position
5:78203591..78273194
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AA seq
877 aa
AA seq
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MALAYSYSCGRRILSSPYPSPGPGLSALLVIIILFIFPGNGVLGGKYVSGNTRVSKISAA
CGDTPEQLSAPSGIITSPGWPFNYQTRVNCSWHIQAHREEVITISFQDFDIQSSAWCSSD
WLTIGAYKSVDGTRVCGSSIPAPYISSKDHVWIKFHSDDRYTGKGFRLSYVTGRSEEVGC
DWDQFHCNNGKCIPEIWKCNTMDECGDNSDEELCERPIPPTAFPFQPCTYDQFQCLSRYT
AAYTCLPEALQCDGNIDCLDLEDEIDCEPPSCGEWLRNFYGTFSSPNYPAFYPPGSNCTW
LIDTGDRRKVILRITDLKLDGTGYGDYIKVYDGLEENSHRLLRVLTSFDSRPPITVVSSS
GQVRVHFYADKVNAARGFNATYQVAGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDE
RNCSSCQKDEFPCSRNGVCYPLADRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFES
WVCDAQDDCGDGSDEESCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERR
SFETHLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSSNQASILENLRLAVRSQLG
LTSFRSTTSTRQSNLWNRVFSFARSRNSGSLALVSTDGSDTAGEQHVTREPERSSLHRSL
LMLDSDDADRDGEQRDIPGAVGGVVAPLPQKAAPTSVVEAIVGATGISTGCHTTITTDIV
PSQLGTSEQPSISPARQQLSSALSRVTQSLRRVRISIGRCSLAGQNQSPLRQLDNRVHGR
DGNDNNDDDDVELLIPISDAASGVDVRDHCRPVTEPGSNSLQGCRKNCVSLPHREQSNNR
DGPCENCGMVHTAQIPEECLEATLKNEASDDESLLVC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgcctactcttacagctgtggtcggagaatcttgtctagcccgtatccatca
ccggggcccgggctgtcagcactcctcgtcattattatcctcttcatcttccctggaaat
ggcgttctaggtggaaagtatgtttcaggaaatacacgggtttcaaagatctcagctgca
tgtggtgatacaccagaacagctcagtgcgccaagtggaataattacaagtccaggctgg
ccctttaactatcaaacccgagttaattgtagctggcacatacaggctcaccgggaggaa
gtcatcaccatcagcttccaggattttgatatccagagctctgcttggtgtagttcagac
tggctaactataggagcatataaaagtgttgacggaactagagtgtgtggatcatccatt
ccagcaccttacatttcttcaaaggaccatgtctggattaagtttcattcagatgacagg
tatactggaaaaggtttccgattgtcttatgtcacaggaagatctgaggaagtaggctgt
gactgggaccagttccactgtaacaatggaaaatgtatccctgaaatttggaaatgcaac
acaatggatgaatgtggagacaactctgatgaagagctgtgcgaacggccaattccacca
actgcctttccatttcagccttgcacatatgatcagttccaatgtttgtcaaggtataca
gcagcttatacatgcttacctgaggccttgcaatgtgatggaaatattgactgccttgat
ttggaagatgaaatagattgtgaaccccctagttgtggcgagtggctgagaaacttttat
ggaacattcagttctcctaattatcctgcattttatccacctggcagcaattgcacttgg
ctgattgacactggagacagacgcaaagtcattttacgtatcacagatttgaagctggat
ggcactggctatggggattatattaaagtgtacgatggcctggaggagaactctcacaga
ctgctccgtgttctgacatcctttgattctcgaccaccaatcactgtcgtctcttcttct
ggacaggtgcgggtgcatttttatgctgacaaagttaatgcagccagaggttttaatgcc
acctatcaagttgcagggttttgccttccatgggagattccctgtggaggcaattggggt
tgctatactgagcaacagcgctgtgatggttattggcattgcccaaatggacgagatgag
cgcaactgtagctcatgccaaaaggatgagtttccctgctctcgcaatggagtgtgctat
cctctagcagaccggtgcaattaccagaaccattgcccgaatgggtcagatgagaagaac
tgcttcttttgtcagcctggtaacttccactgcaagaacaaccgctgtgtgtttgagagc
tgggtttgcgatgcacaggatgactgtggtgatggcagtgatgaagagagctgtcctgtg
attgtaccgacgcgggtgataactgcagcagtcattggaagtttaatctgtgggctactc
cttgtgattgcactaggatgtacctgcaaactgtactctctgagaatgtttgaacgcaga
tcttttgaaacccatctatcaagagttgaagctgagcttttgcgaagggaggctcctcca
tcctatggccagttaattgcacagggcttgattccaccagttgaagatttccctgtttgt
tcatcaaatcaggcatccattttggaaaatctccgattggcagtacgatcacaacttgga
ttaacctcttttcgatccaccacatccactcgacaatctaacctctggaaccgtgtcttt
agctttgcaagatccaggaattcaggatctctagcacttgtgtcaactgatggaagtgac
acagctggtgagcaacatgttacaagagaaccagaaaggagcagtctgcacagaagtctt
ctgatgcttgattctgatgatgcagatagagatggtgagcagagagatataccaggggcg
gttggtggtgttgttgcccctctacctcaaaaggctgcaccaacctctgtagtagaagct
attgttggagcaactggaatctccactggctgccatactactattactacagacattgtt
ccttcacaattgggaacctcggagcagccaagcattagtccagcaagacagcaattgagc
agcgcactgagtagggtaacacagagtttgcgcagagtgcggatttctattgggagatgc
agtttagcaggacagaaccagagtcccttgagacagcttgataatagagtgcatggaaga
gatggtaatgataataatgatgatgatgatgttgaattgttaattccaatttctgatgca
gcatcaggtgtggatgtaagggaccattgcagaccagtaactgaacctggctctaatagt
ttgcagggatgcaggaagaattgtgtttcacttcctcacagagaacagtctaataataga
gatggaccttgcgagaactgtgggatggtgcatacagcccagatccctgaggaatgcctc
gaagcaacattgaagaatgaagccagtgatgatgaatccttgcttgtctgctaa
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