KEGG   Chiloscyllium punctatum (brownbanded bambooshark): 140477206
Entry
140477206         CDS       T11285                                 
Symbol
polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cpun  Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03020  RNA polymerase
cpun03420  Nucleotide excision repair
cpun04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cpun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140477206 (polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    140477206 (polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    140477206 (polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpun03021]
    140477206 (polr2k)
   03400 DNA repair and recombination proteins [BR:cpun03400]
    140477206 (polr2k)
Transcription machinery [BR:cpun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     140477206 (polr2k)
  RNA polymerase III system
   RNA polymerase III
     140477206 (polr2k)
  RNA polymerase I system
   RNA polymerase I
     140477206 (polr2k)
DNA repair and recombination proteins [BR:cpun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      140477206 (polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 A2L_zn_ribbon MCM_OB DmmA-like_C DUF5816 HypA DZR Cytochrome_C7 Zn_ribbon_13
Other DBs
NCBI-GeneID: 140477206
NCBI-ProteinID: XP_072426796
LinkDB
Position
5:87741198..87751895
AA seq 58 aa
MDIQKDLQPPKQQPMVYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggatatccagaaggacttgcagcctccaaagcaacaacccatggtgtatatttgtgga
gaatgtcatactgaaaatgaaattaaagcaagagatccaatccgatgccgagaatgtggt
tacagaataatgtacaagaagagaacaaagagattggttgtttttgatgcccggtga

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