Chiloscyllium punctatum (brownbanded bambooshark): 140477229
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Entry
140477229 CDS
T11285
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140477229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140477229
03016 Transfer RNA biogenesis [BR:
cpun03016
]
140477229
03012 Translation factors [BR:
cpun03012
]
140477229
04131 Membrane trafficking [BR:
cpun04131
]
140477229
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpun04147
]
140477229
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
140477229
Transfer RNA biogenesis [BR:
cpun03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
140477229
Translation factors [BR:
cpun03012
]
Eukaryotic type
Elongation factors
140477229
Membrane trafficking [BR:
cpun04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
140477229
Exosome [BR:
cpun04147
]
Exosomal proteins
Proteins found in most exosomes
140477229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
G-alpha
Motif
Other DBs
NCBI-GeneID:
140477229
NCBI-ProteinID:
XP_072426851
LinkDB
All DBs
Position
5
Genome browser
AA seq
455 aa
AA seq
DB search
MGKEKPHINLVIIGHVDSGKSTTTGQLIYKCGGIERRAIEKLEQAANQIGKGSFKYAWVL
DKLKAERERGITIDISLWKFHTQKFYFTIIDAPGHRDFIKNMLTGTSQADVALLVVSAAP
GELEAGISRSGQTREHALLAFTLGVKQLLVCVNKMDVTQPPYSQRRFEEVVKNVSVYIRK
IGYNVASVPFVPVSGWNGENMLTPSPKMPWFRGWKIKRREGHASGQTLLEVLDAILPPGR
SLNKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGNMVTFAPVNLTAEVKSIQMHHEPVS
EAFPGFNVGFNIKNVSVKAIRRGNVAGNCRNDPPTQANRFTAQIIVLNHPGFIKVGYSPV
VDCHTAHVTCRLSEFKERLDRRSGQKLEDNPMVLKSGDAATVEFIPIKPLCVETFFEYPP
LGRFAVRDLKQTVAVGIIKSVDKASMAKKLTQKEV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagcctcatatcaatcttgttattattggccatgtcgattctggcaag
tctaccactacaggccaactcatttataaatgtggtggtattgagcggcgggcgattgaa
aaactagaacaagcagcaaatcagattggaaaagggtcatttaaatacgcctgggttttg
gataaactgaaggctgagcgggaaagaggtatcacaatagacatttcactctggaaattt
cacacccagaaattctacttcaccatcatcgatgctcccggccatcgtgatttcattaaa
aacatgttgactggaacatcccaggctgatgtcgcgctactcgtggtttcggccgccccg
ggcgaactcgaagctgggatttcgaggtcaggtcagactcgggaacatgccctcctcgcc
ttcaccctcggagtgaaacaactcctcgtctgtgtcaataagatggatgtaactcaaccg
ccgtacagccagagaaggttcgaggaagtggtaaagaatgtgagcgtttacatccgcaag
atcggctacaatgtggcgagtgtgccgttcgtgccggtctctggctggaatggggagaac
atgctgactcctagccccaagatgccttggtttcgagggtggaaaataaaacggagagaa
ggccatgcgagcggtcagaccctactggaagtactggacgctatccttcctcctggacgt
tccttaaacaaacccctgcgtttgccgctgcaggacgtctacaaaattggaggcattgga
actgttccagttggaagaatagaaactggagtcttgaagcctggtaatatggtgacgttt
gctccagtaaacttgacagctgaagtgaaatcaattcagatgcaccatgaacctgtatct
gaagcattccctggctttaatgttggtttcaacattaaaaatgtgtctgtgaaggctatt
cgtcgtggtaatgtggctgggaattgcagaaatgatccaccaactcaggccaaccgtttc
acggcacaaataattgtcctcaatcatccaggctttatcaaagttggttattctccagta
gtagattgccatactgcccatgttacctgcaggctttctgagtttaaagaaaggcttgac
cgacgttctggacagaagctagaagataaccctatggtcttgaaatctggagatgctgcc
acagtggaatttattccaatcaaaccactctgtgttgaaaccttctttgaatatccaccc
cttggtcgctttgctgtccgtgatttaaagcaaactgttgctgttgggataattaaatcg
gtggacaaagcatcaatggctaaaaagctgacacagaaggaagtttaa
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