Chiloscyllium punctatum (brownbanded bambooshark): 140477301
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Entry
140477301 CDS
T11285
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpun00535
]
140477301 (col14a1a)
Proteoglycans [BR:
cpun00535
]
Extracellular matrix (ECM) proteoglycans
Others
140477301 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
NDNF
Fn3_Dep-1_2nd
FN3_Tor_3rd
VWA_3
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
140477301
NCBI-ProteinID:
XP_072427043
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All DBs
Position
5:complement(104893445..105109538)
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AA seq
1889 aa
AA seq
DB search
MLVPGHRIGTCLLLAIVAVTAHFISKAQGQVASPTRLKFTIVSQDSVKITWKAPRGRFQE
YRLTVTPVVGGKPQTLNLPKGETAAVVEGLLPNQEYMVRLFAIGTNNKESSPAQGQFIMK
ASRSRGRPGSSHTPKHKKELDSRGRDKATNEVAGAQFMCKTPAIADIVVLVDGSWSIGRL
NFRLVRLFLENLVSAFNVDSDKTRIGLAQYSGDPRIEWHLNQHNTKEAVLDAARNLPYKG
GNTLTGLALTFILENSFKPESGARAGVPKIGILITDGKSQDDVLPPAKSLRDAGIELFAI
GVKNADVNELKAIASEPDETHVYNVADFNIMNTIIESLTKTVCSRVEEQDKEIKEATGSL
SSNPVAPANLVITDVTARSFRVSWSHAPGKVEKYRVVYYSTTAGQPEEVVVDGTESTAVI
QNLMSLTEYQLAVFAIYEKAASEGLRGVVTTLALPAAADLDIYDVTHSSMRVKWEPAPTA
TGYMILYAALTGGETADEKEVKVADSVTDVELEGLTPNTEYTVTVYALYGDEASDPLTGQ
ETTLPLSPPRNLEFSEIGHSTARVTWEAASKKVNGYRIMYVKTDGATINEDEVEGSTTIF
LSNLTSLTEYTVAVFSVYDEGQSDPLTGSFTTKKVPKPLDLTISDVSTDEFKVSWKHSAD
DVTLYRLACTPLSGEEAKEFVLSGDVDTIVLDDLLPGTEYEVSLSAIYSDETESDVVAVL
ETTLQQIITTTAATTTTQRPTTAVIRSGIRNLDVGDETTFSLHVSWDPADSLVTQYRVSY
VSLKGDRAEEAVSMVMIPGRQNDLVLQPLLSDTWYKISVTPLYVDGEGTALTVSGKTLPL
SGPTNLRVSEEWYNRFRIRWDPPPTATMGYRVVYTSASAPGPTLDTFVGDDVNTMVILNL
LSGTEYIIKLFATYSTGSSEALVGRAKTLYLGVTNLTPYQVRMTSMCARWQQHRHATTYR
IVIESLRDGRKEEVIVDGGTSHHCFYNLIPNTKYKISVYSQLQEIEGPAVSLLEATAPVP
TQPPAPLATTTPLPTIPPAREVCKAARANLVFLVDGSWSIGDENFVKIIGFLYNTIGALD
KIGPEGTQVAIVQFSDDPRTEFQLNSYSDKENLLNAVQRIRYKGGNTKTGRAIKHARDTI
FTIEGGLQKGIPRVLVVITDGRSQDDVDKISKEMQIDGYSIFAVGVADADYLELVNIANK
PSNRHAFFVDDFDAFKKIEDELVTFVCETASATCPLVMLGDSSIAGFKMMEMFGLVEKEY
ASVEGVSLEAGSLNSFPCFRLHKDALLSQPTRNIHPEGLPSDYTITFLFRLLPDTPQEPF
ALWEILNKQNDPLVGVILDNGGKTLTYFNYDYKNEFQTVTFEDPSVKKIFFGSFHKVHVI
ISKTHAKLIVDCKQVGEKEINAAGNISTNGVEVLGRMVRSRGPRDNSAPFQLQGFDISCS
TSTANRDKCCELPGLRDEGNCPALPHACTCSQDSKGPPGPLGPPGGPGLRGPRGVKGEPG
QRGPEGLRGEIGPTGPQGQPGPQGPSGLSIQGLPGSTGEKGEKGALGPVGHQGMPGGQGR
PGRDGSPGQRGPVGKDGPIGLPGPAGPVGTPGVPGSPGATGSTGTQGSIGSPGPPGQKGE
RGPRGDAQSQNAVRMIAHQVCEQLIQSHLSRYDSILNHIPSNSVQVRASPGPPGEPGRDG
SAGPPGEQGPQGRPGFPGNPGNPGRPGERGIPGSKGDRGVPGIGKQGPRGLQGAPGSPGE
GRTGSPGAPGLPGRQGNMGRTGANGPRGPTGPPGYCDPSSCGGYNVGGGYNDPADQDIPV
VQLPPNSHQTYGPYDEQDPYIYHGSYPYPNPYSQPSYPELHPAQPDEHYDEEDTDELEAV
EVRSPGIRRFARNISKKNSAFSNTKEENP
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgttggtccctggacacagaatagggacctgtctgctcctggccattgtagcagtgaca
gctcatttcatcagcaaggcacagggtcaagttgcctctccaacacggttaaagtttact
atagtgtctcaggacagtgttaagattacatggaaagctcctagggggcgatttcaggaa
tacagattaaccgtgacaccagttgtaggtggcaaaccacagacgttgaacttaccaaag
ggtgaaacagcagcagtagtggaaggtctgctcccaaatcaggaatacatggtgcggctt
tttgcaattggcaccaataacaaagagagttcaccggctcagggacagttcataatgaag
gcttcgcgaagcagaggcagaccaggatcatctcacacaccaaaacacaaaaaggagttg
gactcccgtggcagagataaagcaaccaatgaagttgcaggcgcccagtttatgtgcaag
actccagctattgcagacatcgtggtccttgtggatggttcctggagcattggccgactt
aatttccgccttgtccgactgtttttggagaacttggttagtgctttcaatgtagattct
gacaaaacaagaataggattggctcagtacagtggagacccaaggatagaatggcatctg
aatcaacacaatacaaaggaagctgtactggatgccgccagaaatcttccatacaagggc
gggaatactctgacaggacttgccttaacgtttatccttgagaatagctttaagcctgaa
tctggagctagagcaggtgtgccgaagattggaatcttgatcactgatgggaagtctcag
gatgatgtccttccaccagccaaaagtttacgtgatgctggcattgagctctttgctatt
ggtgtgaaaaatgcagatgtgaatgagctaaaggcaatcgcctctgaacccgacgagaca
catgtctacaatgtagctgactttaatatcatgaacacaattattgaaagcctcactaaa
acagtgtgctcacgtgtggaagaacaagacaaagaaataaaagaagcaactggaagtttg
agctcgaacccagtggcacctgcaaaccttgtaataactgacgtaacagctcggagcttc
cgtgtcagctggtcgcacgcacctgggaaagtggaaaagtatcgtgtggtttattactct
accacagcaggtcagcccgaagaggtggttgtggatggaacagaatcaacagctgtcatt
cagaatctgatgtccctgacggagtatcagctcgcggtatttgccatctatgagaaggca
gccagcgaaggtttacgtggggtcgtcaccacattggcgctacctgcagctgcggatttg
gatatctatgatgtgacccacagcagcatgagagtcaaatgggaacctgctccgactgct
acaggttacatgatcctttatgctgcactcactgggggagagacagctgatgaaaaagag
gtaaaagtggctgattcagttacagacgtagaactggagggattgaccccaaacactgaa
tatacagtgacagtgtatgccttgtatggtgatgaagcaagtgaccccctgactggacaa
gaaacaacattgccactcagtcctcctcgaaacctggaattctcagaaatcgggcacagc
actgccagggtcacctgggaagcagcttcaaagaaagttaatggatatcgaatcatgtac
gtgaaaaccgatggtgcaacaataaatgaggatgaagttgaaggatcaacaaccattttc
ttaagtaacctgacatcgcttacagaatatacagttgctgttttctccgtttacgatgag
gggcagtcagatcctctcacaggcagttttaccacaaagaaagttccaaagcccttggac
ttaacaatcagcgatgtttctacagacgagttcaaagttagttggaagcattctgctgat
gacgttactttatatcgattggcttgcacccccctgagtggggaggaggcgaaagagttt
gttttgagtggggatgtagacacaattgttctcgacgatttattgcctgggacagagtat
gaggtttctctctctgcgatttacagtgatgagacagaaagtgatgtcgtggctgtactg
gagacaacacttcagcagataatcacaacaacagcagctacaacaacaactcagagacct
actacagcagttattcgatctggaataagaaatctagatgtgggtgatgaaaccacgttt
agcctacatgtgtcctgggacccagctgattcccttgttacacagtacagagtgtcctat
gtatctctaaaaggagaccgcgcagaagaagcggtaagcatggtgatgattcctggaagg
cagaatgacctcgtgctccagcctctactgtcagacacttggtataaaatttctgtgaca
ccactctatgttgatggagagggcactgctctcactgtcagtggcaagacgttgccactc
tctggaccaaccaacctgcgtgtctcggaggaatggtataatcgtttccgaattagatgg
gaccctcctccaacagcgacaatgggttacagagtggtttacacttctgcctcagcacct
ggtcctaccttggatacattcgtgggagatgatgtgaacacaatggtgatcctcaatctg
ctcagtggcactgaatacatcattaaactctttgcaacatactccactggttccagtgaa
gcacttgttggcagagccaaaacattgtacctcggtgtgacaaatcttaccccataccaa
gtccgaatgaccagcatgtgtgcacgttggcagcaacatagacatgcaacaacttacaga
attgtcattgaatctctacgagatggaaggaaggaagaagtgattgttgatggaggcact
tcccaccactgtttctacaatctcattccaaacaccaagtacaaaattagtgtctattca
caactgcaagagatagaaggaccagctgtgagtctactagaggcaacagctccagttcca
acccaaccacctgcacctcttgcgacaacaaccccattgcctacaattcctcctgcccgg
gaagtttgtaaagctgccagagcgaacttggtgtttctcgtggatggatcatggagtatt
ggcgatgagaattttgtcaagatcattggctttctgtacaatacgattggagctctggac
aagattggacctgaaggaactcaagttgcaatagtacaattcagtgatgatcccagaaca
gaatttcaactcaactcatacagtgataaagagaatcttctcaatgctgtccagcggatt
agatacaaaggtggaaatactaagacaggcagagctatcaaacatgccagggatactatc
ttcaccattgagggaggactgcagaagggcattcccagagtcctggtggtaattacggac
ggtcgatcgcaagatgacgttgacaagatttccaaagagatgcagattgatggttacagt
atctttgcagtgggtgttgctgatgctgattacttggagcttgtcaatattgcaaataaa
cccagtaacaggcatgcattctttgtggatgattttgatgctttcaagaagatagaagat
gagcttgttacttttgtctgtgagacagcgtctgcaacttgtccattggttatgcttggt
gattccagtattgcagggtttaagatgatggagatgttcgggttggttgagaaggaatat
gcttctgttgaaggcgtgtcactagaggctggctctctcaatagctttccctgttttaga
cttcacaaagatgctcttctatcacaaccaaccaggaacatccaccccgaaggattgcct
tctgattacaccatcactttcctattccgcctgctgcctgacactccacaggaacccttt
gcactctgggagattctaaacaaacaaaatgatcctctggttggagtcatcttggacaat
ggtgggaaaaccctcacttactttaactatgattacaagaatgagtttcagacagtcact
tttgaggatccaagtgtcaagaagattttctttggcagttttcataaggtgcacgtgata
attagcaaaacccatgcaaaactgattgttgactgcaaacaagttggtgagaaggaaatc
aatgcagcgggaaacattagcaccaatggagtcgaagtgttgggccgaatggtacggtca
aggggcccccgggataattcggcaccatttcaactgcaaggatttgatatctcctgttcg
acttccactgcaaacagggacaagtgttgtgaacttccaggcctgagggatgaaggcaat
tgcccagctcttccacacgcctgcacttgttctcaagacagcaaaggaccacctggaccc
ctgggacctcccggtggcccaggtttgagaggcccaagaggagtgaagggagaaccaggt
caaaggggacctgaaggtctccgtggtgagattggacctactggcccccagggtcaacct
gggccccaaggaccaagtggactttccattcagggactgccgggcagcactggtgaaaaa
ggtgagaaaggagctctcggtcctgtcggccaccaggggatgccaggagggcaagggaga
ccaggacgcgatggttcaccaggtcaaaggggtcctgttggtaaagatggtcctatagga
ttaccaggaccagcggggcctgtgggaactccaggtgtcccaggctctcccggagctaca
ggcagcactggaacccagggcagcatcggatctcctggtccacctggtcaaaagggagag
agaggtccaagaggtgatgctcagtcacaaaatgccgttcgcatgattgctcaccaagtg
tgtgagcagctcatccaaagccatttgtcaaggtacgactctattctcaaccacattccc
agcaactcggttcaggtgcgggcatctccaggccctccgggggagcctggccgtgatggc
tctgcaggtcctccaggagaacaaggacctcaaggtcggccaggtttccctggcaaccct
ggcaatcctggcagaccaggagaaagaggtataccaggttcgaaaggagatcgtggagtc
ccaggtattggcaaacagggaccaagaggactacaaggtgcaccaggttccccaggggaa
ggacgaacaggtagtccaggtgcaccaggtctcccagggcgacagggtaatatgggacgt
acaggggctaacggcccaagaggaccaactggcccaccaggatactgtgatccatcttcc
tgtggtggctacaatgttggaggtggatacaatgatccagccgatcaagacattcctgta
gtacaattgcctccaaactcccaccaaacctatggcccttatgatgagcaagatccatac
atatatcatgggtcctacccctatccaaacccatattcccagccctcttatcctgagcta
catcccgctcaaccggatgaacattatgatgaagaggatacagatgaattggaagctgtt
gaagttcgatcacctggaatcagacggtttgcgaggaatatatcaaaaaagaacagtgcc
ttttcaaacacaaaggaggagaacccgtga
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