KEGG   Chiloscyllium punctatum (brownbanded bambooshark): 140478663
Entry
140478663         CDS       T11285                                 
Name
(RefSeq) uncharacterized protein
  KO
K06237  collagen type IV alpha
Organism
cpun  Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04382  Cornified envelope formation
cpun04510  Focal adhesion
cpun04512  ECM-receptor interaction
cpun04518  Integrin signaling
cpun04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpun00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    140478663
   04518 Integrin signaling
    140478663
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    140478663
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    140478663
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    140478663
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpun04147]
    140478663
   00536 Glycosaminoglycan binding proteins [BR:cpun00536]
    140478663
Exosome [BR:cpun04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   140478663
Glycosaminoglycan binding proteins [BR:cpun00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   140478663
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 140478663
NCBI-ProteinID: XP_072427996
LinkDB
Position
6:3438233..3736713
AA seq 1647 aa
MTRLKSALQCVLVILSTVTLAETACTCSGKSNCHCDGVKGAKGERGFPGAQGPPGIPGFP
GTEGPRGPEGPKGNPGFPGHPGMKGLRGPTGFTGHPGNPAVPGIPGKDGPQGPKGIPGCN
GTKGDPGFPGIPGSEGFTGLQGHSGLPGQKGESAQIVPLYPGDKGNRGPPGHPGPPGQSG
LPGRPGPTGPPGPLGPPGPTGHPGPKGNMGLFFVGSKGDKGVKGHPGPVYRPERGPTITV
KGQKGSPGPPGDPGFPGLPGLPGSVTPGWKGDKGERGDPGALGKPGKDGNPGIPGIQGLK
GDPGYLGFPGRNGAPGIKGEVGCQGPPGPQVEGEDSCDKGERGDPGATGPKGRPGLQGAA
GQPGLPGEQGISRRGPKGQSGYPGQRGPKGDKGDPGQVYEGPSGPPGFPGPPGPPGPVGP
QGETISINGQPGPRGSPGQRGFVGFRGPSGYKGDRGDLCVSCRGTSQPGPPGPPGLPGIP
GREALPGPKGIPGPSGQFGRTGSQGSPGSSGFRGPPGLDGDPGIGGGQGSKGDKGDCGLQ
GNTGRQGKDGIPGQPGPQGPQGIKGDPTPFSPKGDRGPQGVPGNPGIPGATGPPGSPGFG
PPGSQGLKGNRGVPGFRGVDGVPGEKGDRNNESAVPGPTGLRGETGAPGPVGFPGSSGPP
GRDGSPGPPGEKGETGHSMKGSTGPAGPKGNPGHPGVLGPPGIPGRPGAPGTPGLPGVTG
PKGDGRFGQPGNRGPPGPAGNIGPPGEKGNSGPPGLPGEEGRPGRNGLQGPQGDLGCPGI
QGPTGPRGQLGKGIPGPAGSEGPPGPPGLQGTTTRGPTGDPGIPGVGIPGIPGAPGSVGT
PGLSGPPGPRGSPGNPGRPGIPGRSGPKGEPGVMGEPGNPGLTGEQGFQGPAGEKGSKGQ
PGPKGKEGAIGQIGQKGEKGMKSVTYNITVKGVMGDPGLQGSQGITGPRGETGCPGGPGD
KGKDGAPGPPGPAGPPGDPGLPGNSGNPGFPGALGSTGPMGLPGDKGEKGFAGLPGFSAS
PGSDGIPGLKGEKGEPSRLVYGNPGRPGEKGNQGPSAPKGQPGTPGSRGKPGTDGPPGNP
GEKGDQGQSGYPGPAGCKGSEGLFGKRGLPGSQGVPGTPGMPGRPGPPGLTGAKGRQGLD
GIPGPHGLKGDPGLPGRGYKGQPGPCGQSGTKGNSGPPGDESEVGPPGPRGDPGHPGPSG
LSGEPGPPGPAGMSIQGPKGNRGPQGVPGPAGPRGLKGLLGQPGPECLKGDKGSSGLSGF
QGNPGDRGDPGEQGQPGIPGTSAQGSKGERGSTGTPGFPGLQGDKGVKGQTGDAGLSGLP
GQPGPEGLPSVMPTTPLKGDSGLPGPQGSEGQSGTPGSPGPPGCIGSQGPTGSLGRNGPP
GGMGRPGSKGSPGFPGQQGPKGYPGPQGQEGNRGHPGPTGTDIQGFVFTRHSQTTEIPLC
PGNTKQLYIGYSLLYVQGNKRAYGQDLGAAGSCLPRFSVMPFLFCDVNDVCNYASRNDYS
YWLSTSRQMPMDMAPISGKALKPFISRCTVCESPAMVLAVHSQTVQIPPCPRGWKSLWIG
YSFVMHRSSGAEGSGQALASPGSCLEEFRVAPFIECHGRGTCNYYVNTYSFWLATLDPSQ
MFRKPRPQTLKAGELRSIISRCQVCTK
NT seq 4944 nt   +upstreamnt  +downstreamnt
atgaccaggctgaagtcagctctccagtgtgttctcgtcatcctgtctaccgtgaccctg
gcagagacggcctgtacatgcagtggtaaatcaaactgtcactgtgatggagtaaaaggc
gctaagggcgaaagaggtttccctggtgcacagggtccacctggaattccaggatttcca
ggtacggagggtcctcgaggtccggaaggtcctaagggaaatcctggatttccagggcat
ccaggcatgaagggtttgaggggacccacaggtttcacaggccatccaggaaaccctgct
gtgccaggtatccctggaaaggatggtcctcaaggtcctaagggcataccaggatgcaat
ggcacaaagggtgatcctggttttccaggaattcctggctcagaaggatttacaggactt
caaggacattcagggcttccaggacaaaagggtgaatcagctcaaattgtaccgttatat
ccaggggacaaaggaaaccgtggaccaccaggtcacccaggacctccaggtcaatcagga
cttccaggacgaccaggacccactgggcctccaggtcccttgggtccaccaggaccaact
ggtcatccaggaccaaagggcaacatgggattattctttgtgggttccaagggtgacaag
ggtgtgaaaggtcatcctggtcctgtttatcgaccagagcgtggtcctactatcactgtg
aaaggacagaagggcagtccaggaccccctggagacccaggatttccaggtctcccaggt
ttaccaggctctgtcacacctggatggaagggagataaaggagaacgaggggacccaggg
gccctggggaaaccaggtaaagatgggaatcctggaatcccagggatccagggattgaaa
ggtgatccaggttatttgggatttccaggaagaaatggagcaccaggaattaaaggggaa
gttggctgtcaaggaccacctggtccacaagttgaaggagaagattcctgtgacaaagga
gaacgtggcgatccaggtgctacaggacccaaaggacgaccaggattacaaggtgctgcg
ggtcagccaggtttaccaggagagcaagggatttctagacgtggccccaaaggccaatcc
ggatatcctggacaaagaggtcccaaaggggataaaggtgatcctgggcaggtttatgaa
ggtccttcaggtcctcctggatttccaggccctccaggcccaccaggccctgtgggtcca
caaggtgagactatcagtataaatggccaaccaggacctagagggtcaccaggacaaaga
ggttttgttggttttcgtggtccaagcggatacaaaggtgatagaggtgacctgtgtgta
tcatgccgtggaacttcacaacctggtcctcctggtccacctggccttcctgggatacct
ggcagggaggcattaccaggcccaaaaggaattcctggtccttcaggtcaatttggaaga
acaggttcccagggttctccgggatcctcaggatttagaggaccaccaggcttggacggt
gacccaggaatcgggggtggccaaggttcaaaaggggacaaaggtgactgtggtttgcaa
gggaatacaggaaggcaaggaaaggatggaatacctggtcaaccaggaccacaaggaccc
caaggaattaagggtgacccaacaccattttcaccaaaaggtgacagaggtccacagggt
gtccctggaaaccctggtatcccaggagctacaggtcctcctggttcacctggctttggg
cctccaggtagtcaagggctcaaaggaaatcgtggtgtacctggatttcgaggagttgat
ggtgtcccaggtgagaaaggagacaggaataatgagtccgcagtcccaggcccaactgga
cttcgtggtgaaacaggagctcctggacctgtgggtttcccaggtagctctggacctcca
ggtagagatggttccccaggtcctccgggagaaaagggagaaacaggacattcaatgaaa
ggatcaactggtcctgcaggtcctaaaggaaacccagggcatcctggagtattgggtcct
ccagggattccaggaaggccgggagcacctggaacaccagggctgccaggagtcactggt
cctaagggtgacggacgttttggacagccaggaaatcgtggtccaccaggtcctgcagga
aacattggaccaccaggggagaagggtaattcaggtcctcctggattgcctggagaagaa
gggcgtcctggtcgcaatggtcttcaaggtccacaaggtgacctcggatgtcctggtatt
caggggccaacaggcccacgtggacaactgggtaaaggaatacctggacctgcaggttct
gaaggcccgcctggtccacctggtctacaaggaacaacaactagagggcctactggagat
ccaggaattccgggagtgggtattccaggcatccctggtgctcctggatctgttggaaca
ccaggcttgtcaggccctcctggaccaagaggttctccagggaatcctggtcgaccagga
ataccagggagatcaggtccaaaaggtgaacctggtgttatgggagagccagggaatcca
gggctaactggtgaacaaggatttcaaggccccgcaggagagaaaggttctaaaggtcaa
ccaggaccaaagggcaaagaaggtgcaattggtcagataggtcaaaaaggtgaaaaagga
atgaaatcagttacatataatataacagtaaaaggtgtcatgggagaccctgggctacaa
ggttcgcaaggaataacaggaccaagaggtgagactggttgccctggtggaccgggtgac
aagggtaaagatggagcaccaggacctccaggtccagcaggcccaccaggtgatccagga
ttaccagggaattcaggcaatccagggtttcctggagctcttgggtctactggtccaatg
ggcttgccaggtgacaaaggagaaaaagggtttgctggactaccagggttttcagcttca
cctggttctgacggtatccctggcctaaagggagagaaaggagaaccaagcagattagta
tatggcaacccaggccgtccaggagaaaagggtaatcaaggtccttcagcccctaaagga
caacctggtactcctggatctcgaggtaaaccaggaactgacggtcctcctgggaaccct
ggtgagaaaggcgaccagggccaatcaggttatccaggtcctgcaggctgtaaaggcagt
gaaggactttttgggaaacgaggcttaccaggaagccaaggtgtcccaggaaccccagga
atgccaggacgccctggtccaccaggattaacaggcgcaaagggcaggcaaggacttgat
ggcattccaggacctcatggactgaagggagatccaggtttacctggaagaggatataaa
ggccaaccaggcccgtgtggacaatcaggtaccaaaggaaattcggggcctcctggtgat
gagagcgaagtaggtcctcctggtccacgaggtgaccctggtcatcctgggccttctggt
ctgtctggtgaacctggcccacctggtcctgcaggaatgagtattcaaggtcccaaagga
aacagagggcctcaaggcgttcctgggcccgcaggtcctcgtggactgaagggattactt
ggacagccaggaccagaatgtctgaagggggataaaggatcatctggtctctcaggattt
caaggcaacccaggtgacaggggtgatccaggtgaacaaggacaaccaggaattccaggc
acatcagctcaaggttccaaaggagagaggggttcaactggaactcctgggttcccaggt
ttacaaggtgacaaaggagtcaaaggccagactggagatgcaggattgtcaggattgcct
ggacaaccaggtccagaagggttgccatctgttatgccaacaacacctctaaagggcgat
tccggactcccgggtccacaggggtctgaaggacaaagtggaactcctggatctcctgga
ccacctggatgcatcggtagccaaggtccaactggttcacttggtcgtaatgggcctcct
ggtggtatgggacgtccaggatcaaagggctcaccaggatttcctggacaacaaggacca
aagggctatccaggtccccagggacaggaaggaaacaggggtcaccctggaccaacagga
acagatatccaaggttttgtttttacacgtcatagtcaaactacagagatacctttgtgc
ccaggcaacactaaacagctatacattggttattctctcctctacgtgcaaggtaacaaa
cgtgcatatggacaagatttaggagctgctgggagttgcttgccaagattcagtgtcatg
ccatttttgttctgtgatgtaaatgatgtctgtaactatgcatcaagaaatgactattct
tattggctatcaacttcaagacaaatgccaatggatatggctccaatcagtggaaaagcg
ctgaaaccatttataagcagatgtactgtttgtgaaagtcctgcaatggtcttagctgtt
catagtcaaactgttcagatcccaccatgcccgaggggctggaagtctttgtggataggc
tattcttttgtaatgcacagaagctcaggtgcagagggatcaggccaagcactggcttca
cctggctcctgtttagaagaatttcgtgtcgccccctttattgaatgtcatggaagggga
acatgcaactattatgtaaatacctacagtttttggctggcgacgttagatccctcacag
atgttcaggaaacccagaccacaaacactaaaggcaggagaattacgatccataataagc
cgctgtcaagtctgtacaaagtaa

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