Chiloscyllium punctatum (brownbanded bambooshark): 140478690
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Entry
140478690 CDS
T11285
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpun04040
]
140478690 (trpc1)
Ion channels [BR:
cpun04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140478690 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank_4
LHD_TRPY1
DUF6779
Eno-Rase_FAD_bd
RIN1
Motif
Other DBs
NCBI-GeneID:
140478690
NCBI-ProteinID:
XP_072428077
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All DBs
Position
6:6882634..6977233
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AA seq
845 aa
AA seq
DB search
MASLYQSTESSSPNKYLTLKDVRQVKEETTIDEKLFLLACEKGDNYMVKKLLDEKFSELN
INCVDVLGRNAVTIAIENENLDILQLLLDHGCQTTDALLVAINSEVVGAVDILLNHRPRR
SSKPTIAFQMFTEESMSILCNTSKYRPLIDPSLWIEQQHYTKLMQRIQNPEYSTTMDVAP
VILAAHRNNYEILTMLLKQDLSLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLSS
PSLIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSREL
EVILNHTSSDEPIDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGY
RRKHTCKKILTVLSVATLWPVLSLFYLLAPKSRVGRIIHTPFMKFIIHSASYFTFLLLLN
LYSLVYNEDKKNTMGPALEMIDYLLITWITENKESTSIQWLIICLQHPKTFYSQIDNTAS
AVKLRMVWSDVKRLWYDGLEDFMEESRNQLSFVMNSLYLATFALKIVAHNKFHAIGDRKD
WDAFHPTLVAEGLFAFGNILSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVL
ISFTIGLTQLYDKEFSMVEGKDCSGIFCEQQSNVAFHSFVGTCYALFWYIFSLAHVALFV
TRFSYTDDLQSFVGALIIGTYNVVVVIVLTKLLVAMLHKSFQMIANHEDKEWKFARAKLW
LSYFDDKCTLPPPFNIIPSPKTICYLFTSLNKWICSHTSAGKVKRQNSLKEWKTLKHKRD
QNYQKVMCCLVHRYLTAMRQKMHSTDQATEENLNELRQDLSKFRNEMRDLLGFRTAKYAM
FYSRN
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggccagtctctaccaaagcaccgagtcctcctcacccaacaaatacctgacactgaag
gatgtgcggcaggtcaaggaggagaccaccatcgatgagaagctcttccttctggcgtgt
gagaaaggagataattacatggtcaaaaagctgcttgatgagaaattcagcgagctgaat
ataaattgtgtcgatgttctggggagaaatgcagttaccattgccattgaaaatgagaat
ctggatatcctgcagcttctcttggaccatggctgccagaccacggatgctctgcttgtg
gcaattaactctgaggttgttggtgcagttgatattcttctcaatcatcgtccccgacgt
tcatcaaagccaactatagcattccagatgtttacagaagaatcaatgtcgattttgtgt
aacaccagcaaatacagaccattgattgatccttccctttggattgaacagcaacactat
acaaaattaatgcagagaattcagaatcccgaatactcaactacaatggatgtggctcct
gttatccttgctgctcatcgtaataactatgagatcctgaccatgttactcaaacaggac
ctctcactaccaagaccacatgcagtaggatgtgaatgcacactgtgtaatgcaaagaac
aagaaggatagcctacgccattctaggttccgtcttgatatctaccgctgcctgtctagt
ccatcgttgatcatgctgacagaggaggatcctatactaagagcttttgaactcagcgca
gatttgaaggaactgagcctcgtggaggtggaatttaggaatgactatgaggagctagca
cagcagtgtaagacctttgcaaaagatctcctagcacaggcacggaattcccgtgaattg
gaggttatcttaaatcatacatccagcgatgaacctattgacaagagaggattgcttgag
gagaggatgaacctaagccgacttaaactagcaattaagtacaaccaaaaagagtttgtg
gctcagtccaattgccagcagtttctgaacacagtctggtttgggcagatggcaggctac
aggcggaagcacacctgtaagaagattctgactgttctttcagttgccaccctgtggcca
gtgttgtcccttttttacctgctagcaccaaagtctcgagtaggacgaattattcacact
ccttttatgaaattcatcattcacagtgcatcatactttacatttctactgttattgaac
ttatactcactggtgtacaacgaagacaaaaaaaacacgatgggcccagcactagagatg
atcgactacctcctgattacatggataactgaaaacaaagaatccacatctattcagtgg
cttatcatatgtctgcaacatcccaaaacattttacagtcaaatagataacactgcaagt
gcagtcaagttaagaatggtgtggtcagacgtgaagagactgtggtatgatggacttgaa
gattttatggaggaatctcgaaatcaactcagttttgtcatgaactcgttgtatttagca
acatttgctctcaaaattgtggctcataataagttccatgcgattggagacaggaaggat
tgggatgcgttccatcccactttagtggcagagggtctgtttgcttttggcaacattctc
agttacctacggcttttctttatgtacacgactagttccatccttggaccattgcagatt
tccatgggacaaatgttgcaagattttggaaagttcttgggaatgtttctgcttgttctg
atctctttcaccatcggccttactcagttgtacgataaggagttttcgatggtggaaggc
aaggattgttctggaatcttctgtgagcaacagagcaacgtagccttccattcgtttgtt
gggacctgctatgccctattttggtatattttctccctggcacatgtggcactgtttgtc
acaagattcagttacactgatgacctgcaatcttttgttggagcactcatcattggcaca
tacaacgtggtggttgtgattgtcctgactaaactgctggtggcaatgctacacaaaagc
ttccagatgattgctaatcatgaagacaaggaatggaagtttgcccgagcaaaactgtgg
ctgagctactttgatgacaaatgtactttaccgccaccattcaatatcattccttccccg
aaaaccatttgctatctcttcacaagtcttaacaaatggatctgctctcacaccagcgct
ggaaaagtgaaacgtcagaatagccttaaagaatggaagactctcaagcataaacgagat
caaaattaccaaaaagtaatgtgttgcttggtccatcgttaccttactgcaatgaggcaa
aagatgcatagcacagaccaagcgactgaagagaatctgaatgaactgcgccaggacctt
tccaagtttcgcaatgaaatgagagaccttcttggcttcaggacagcaaaatatgccatg
ttctattcacggaactaa
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