Chiloscyllium punctatum (brownbanded bambooshark): 140478787
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Entry
140478787 CDS
T11285
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140478787 (taf1c)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
140478787 (taf1c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
FAM133
EVC2_like
Motif
Other DBs
NCBI-GeneID:
140478787
NCBI-ProteinID:
XP_072428268
LinkDB
All DBs
Position
1
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AA seq
981 aa
AA seq
DB search
MESAFPYSLYPSFYNPGPSVRNPRELGGWGQYEHVQPFCAESGDQQETELKWSALKSLKQ
ESWEPLEPIALPLLPAKTVCKFQPTSLEDLTYTGRLMTTGGRDDMAMGALNFTEQMANFF
LDHRNDAFSSMGKLLEEHFYFGEYPLRGKARQTTISVRHLRAFTEQVKQNECPLSCRSMQ
ARLLNTLLRECIFDIPPSLLAENIHEEMKIQRNKLLFDQSATGGALVYCPFSKEASLEEG
CLIYPGNESMSILNFRKIKLGLDEYKMPKLNVKFKPIKFKLNGRIHQIDSSAVEEEVFIG
VRSDYHCGAWKLSQDVNPSILQVVQVDNIATCINVSPHVPGELVIASECGTAYLWTLDKG
LQKIRKEADNLYFNAQLPWRWCDFTAHPRVYMYADRTGLDLTDVRAGETCDQTLFKIGAT
ASCQKGERVILPKHLQDVNPYHYLVTTQYSAYIVDERFPTVPVLKWAHMLKSPPMFAQVA
CGAAKKRANKIVLGTQRTQEVLLLQYSGGSQLPCKSLGPPLKLSSIYDMMQHLPVKLPRQ
HEAVVERLHSPGAGLATLYHCCGKKSLSVIQLSAMGDLFYQMLIHKNSSTSRKTSRVRVG
CDHEPNNSILTERVQSSNHSTEGRDEGAEDLVQGETERPEGNSSRSGVDEQSFQCTNKPL
KPSCTALATCSRWVNSFLKKQKNFQSASNMLHKLTGISSKRLFPCKTFKKGEESTDTCRE
MWDKMSAVMEKQQVLCHSTFPILDPVSVPDVVDASNWRDELSERLTAAWEGKWSQWWEEK
LGMNRDKKVQALRAKRRREKLARTRQRKELSGSFTSSVSGLSDFSDFSSWSTFSGINSEH
SDYLSSTESNVTSNKSAEANQSIRTVAEESCREMEAESSVAVVEQSQAPIPIFSQEMQLV
SIPKERKRILQSYLAALEDHSFQPSQEGDEPSMPLSLTSSIQMSFPDPSQVASSYEVPWR
PSSQSQLGSSQPKKKRAKMGF
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgctttcccctactccctgtatcccagtttctacaatcccggcccctccgtc
aggaatcctcgggagctgggtggctgggggcagtatgaacatgtccagccgttctgtgcg
gagagcggggaccaacaggaaactgaactaaaatggtcagctctgaaaagtctgaagcaa
gagagttgggagccattggaacccattgcacttccacttcttccagccaaaacagtttgc
aagtttcagccaacaagcctggaagatctaacttatactgggaggctaatgacaactgga
ggaagagatgatatggcaatgggtgcacttaatttcacggaacagatggctaatttcttt
cttgatcaccgtaatgatgccttcagttcaatgggcaaacttctggaggagcacttctat
tttggagaatatcccctcaggggaaaagcaagacagaccacaataagtgtaagacatctg
agggcgttcacagagcaagtaaagcaaaacgagtgcccactttcttgtcgaagtatgcaa
gcaagacttttaaatacgttgttgcgggagtgtatttttgatattccaccaagcttgttg
gcagaaaacattcatgaagaaatgaagattcaaagaaataaacttctgtttgatcagtct
gccactggtggtgctttggtatactgtcctttctccaaagaagccagtttagaagaagga
tgcctgatctatcctggcaacgagtccatgagtatactcaactttcgcaaaatcaagttg
ggtcttgatgaatataaaatgcccaaattgaatgtgaaatttaaaccaattaaatttaaa
ctaaatggtagaatccatcaaatagattccagtgctgttgaagaagaagtttttataggg
gttcggtctgactatcattgtggagcatggaaactttcccaggatgtgaatccatctatt
ctacaggtagttcaggtggataatattgctacttgcatcaatgtcagtcctcatgttcct
ggagagctggtgattgccagtgagtgtggaactgcatacctctggactttagacaaaggc
cttcagaaaattcgaaaggaagcggataacctctactttaatgcccagttgccttggaga
tggtgcgatttcacagctcacccacgagtttatatgtatgctgacagaaccggccttgac
ttaactgatgtgagggctggcgagacctgtgaccaaaccttgtttaagataggagcgact
gccagctgtcaaaaaggtgaacgtgtaattcttcccaaacatctgcaagatgtaaatcca
tatcattatcttgttaccactcagtattctgcctacattgtagatgaacgatttccaact
gtacctgtcctaaaatgggctcacatgctgaagtcaccaccgatgtttgcacaagttgca
tgtggggcagccaaaaaaagagcaaacaagattgtcctggggactcagcgtacccaggaa
gtcttacttctgcagtattcaggtggatctcagcttccttgcaagtcacttggcccacca
ctgaagctttctagtatttacgatatgatgcagcatttaccggtcaagttacctcggcaa
catgaagcagttgttgagagacttcactcccctggagcaggactcgcaacactttaccat
tgttgtggcaaaaagtccctgtcagtgattcagctctctgcaatgggagacctgttttac
caaatgctaattcataagaattcatcaacaagtagaaaaacctctagagtgagggttgga
tgtgatcatgaaccaaataactcaattttgactgaaagggtacaatcatcaaatcattct
acagaaggtagggatgaaggagcagaagatttggtacaaggtgaaacggaaagaccagaa
ggaaattcttcacgaagtggagtagatgaacaaagtttccaatgtactaataaaccttta
aaacccagttgcactgctcttgccacatgttcaagatgggtaaactcatttttaaagaag
caaaaaaactttcaaagtgcctccaatatgctccacaaacttactggtatcagttcaaaa
cgtttgtttccatgtaaaacatttaagaagggtgaagaatcaactgacacatgcagggaa
atgtgggataaaatgagtgcagttatggagaagcaacaagtcctttgtcacagtacattt
ccaatactggatcctgttagtgtcccagatgttgtggatgcctcaaattggagagatgaa
ctaagtgaaaggctgacagctgcgtgggaaggaaagtggagtcagtggtgggaagaaaag
ctaggtatgaaccgggacaagaaggttcaagcactacgtgcgaaaagacgacgtgaaaaa
ttagcccggacaaggcaacggaaagagctgtcgggcagtttcacttcctccgtgtctggc
ttgtctgatttcagtgatttttcaagttggagtactttctctggaataaattcagagcac
agtgattatttgtctagtacagaaagtaatgttacatccaataaatcagctgaggcaaat
caatcaattaggacagttgctgaagagtcttgtagagaaatggaagctgagtccagtgtg
gctgtagtggaacaaagccaggcaccaataccaattttttcacaagaaatgcagttagtc
agtattcccaaggaacggaaaaggattcttcaaagttacttagccgccctggaagaccat
tcattccaaccttctcaagagggtgatgaaccaagtatgccattatcattaacttcatcc
attcagatgtcttttcctgacccatcacaagttgcatcttcttatgaagtaccctggcga
ccatcctctcagagtcaacttggatcatctcagccaaagaagaaaagagccaagatggga
ttttaa
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