Chiloscyllium punctatum (brownbanded bambooshark): 140478855
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Entry
140478855 CDS
T11285
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140478855 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140478855 (rubcn)
Membrane trafficking [BR:
cpun04131
]
Autophagy
Other autophagy associated proteins
Others
140478855 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
140478855
NCBI-ProteinID:
XP_072428478
LinkDB
All DBs
Position
6:complement(34206433..34266797)
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AA seq
1010 aa
AA seq
DB search
MLSTWRENDWHHDMESAEEAECRQEQWKLLGGLKTTAEGLLSTNNPNVWSKYGGLERLCK
DMNKILCHGLLEDEVYAQHKDYWQFITNCHWVSPSLANHIVQIMESDVQSIPKSNPQKAQ
YWLHHSLQFHCLSSQLRSLLSDCEYTRKFYKDTAFLLSNPHVTAMFQCLEAVEQNNPKML
AQIDTSVFARKCNSSLPMVKSQSLTALPGTKCMPSVGEWQKRHTTSYTNLLAHSTNLHVS
GDAPQDFNNINNTRQALKKRANLTFIPDSTDKPALDQYSGIHQFHDIPSMEPFSPVSETT
ISTPVSHSEDSSAEVQDEGSSEMDDGPEYLAIGNLGRRDRSSSQCSHSSSPCTGSSQTLV
PSAWQVPKITVSCSESLLNLPRRSSFSETQNLERQASFKKSHSRSHSDTGIATAKTSGDL
RKITIIVEDPVEESHLGVRNLKENGPFTTQSCQISSPISPYMEAEGTCYTHHSDGMFRRP
SQGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLMKKQIMDDDEEDSDK
EIRELKQKIRIRRQQIRTKKLLPGLRSTESDTCTTESGSPISSRDSAPLSDSGSTDGVDE
FELKDCIDESNLIHMSANGLSASMASLFSDADIRKSLASRSKPAISSESITFSFLHSNSA
EAVAMGLLKQFEGMQLPAASELDWLVPEHDAPQKLLPIPDSLPVSPDDGEHADIYKLRIR
VRGNLEWAPPRPQIIFNIHPSPKRKVVVVKQNYRCAGCGIRVEPDYIKRLRYCEYLGKYF
CQCCHENVQSVVPSRILRKWDFSKYYVSNFSKDLLNKIWNDPLFNVQDINSALYRKVKSL
DQIYMLRIQLVHMKNLFKTCRLAKEYGILSCFCRLLDNFDTKPGHLTEDLHLYSLNDLTA
VKKGELAGRLKELVKIGAAHVESCMLCQAKGFICEFCGDGTDIIFPFELHKCKRCEECKA
CYHKCCFKSDQCPRCDRLQARKELLAEQTIELYLESEGEEEVSSQSTSCD
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgacatggagagagaatgactggcaccacgacatggagagcgcggaggaggca
gagtgcagacaagaacagtggaaactcctgggaggtctgaagaccactgcggaggggctg
ctgtcaacaaataaccccaatgtttggtctaagtatggaggtttggagcgtctctgtaag
gatatgaacaagattttgtgtcatggactcctggaggatgaggtatatgcacagcataaa
gattactggcaatttataactaattgccactgggtcagccctagccttgctaatcatatt
gttcagattatggagagtgatgtgcaatctatcccaaagagtaatccacaaaaagcacag
tattggctccatcacagccttcagttccactgcctctcatcacagctaaggtcattgctc
agtgactgtgaatacacaaggaaattttacaaagatactgcttttctgttgagcaatccc
catgtgactgctatgttccaatgtttggaggctgtggaacagaataatcctaaaatgtta
gctcagattgacacatccgtgtttgcaaggaagtgcaattcctccttaccaatggtgaaa
agccaaagtctgactgctcttcctggaaccaagtgtatgccctctgtaggggagtggcag
aaaaggcatacgacctcatataccaacctcttggctcattctaccaatttgcatgtttcg
ggtgatgcacctcaggatttcaataatatcaataacactcggcaagcattaaagaagagg
gctaatttgacatttattccagattcaacggataaaccagcattggatcaatactctggc
atccaccagtttcacgacatcccttctatggaaccattttctccagtcagtgagacaact
attagtaccccagttagccatagtgaggattcttcagctgaagtacaggatgagggatca
agtgaaatggacgatgggccagagtatctggcaattggaaatctgggacggagagatcgc
agttcaagccagtgcagtcatagcagttccccttgtactggcagttctcagacactagtt
ccttctgcctggcaagttcctaaaatcaccgttagctgtagtgaatctctgctgaatctt
ccaaggcgttccagcttttccgaaacccagaatctggaacgacaggctagtttcaagaag
agccatagccgatcccattctgatactggtatagcaacagcaaagacatcaggggacctc
cggaaaatcactattatagtagaggacccagtggaagagtcacacctgggagtaagaaac
ctgaaggaaaatggtcctttcacaactcagagttgtcagatcagttctcctatctctccc
tatatggaagctgagggtacctgttacacacaccattctgatggaatgtttcgacgacca
tcacagggccagtctctgatcagctatctatcggaacaggacttcggaagttgtgcagac
ttggaaaaggagaatgcccatttcagtatctctgaatcactgattgctgccattgaacta
atgaagtgcaatctgatgaagaaacaaatcatggatgatgatgaagaggatagtgacaaa
gaaataagagaactaaaacagaagattcgtattcgacgacagcagattcgtacgaaaaag
cttctgcctggattgaggagcactgagtcagatacctgcaccacagaaagtgggtcccct
atcagttcccgtgattctgcgcctctatcagattctggttccacggatggagtggatgaa
ttcgaattaaaagattgtattgatgagtcaaacctcattcacatgtcagcgaatgggctc
tcagcatcaatggcatcattgttttcagatgcagacattagaaagagtttggcttcacgg
agcaaaccagcaataagctcagagtccattacattctcattccttcattccaactcagct
gaggcagttgccatgggcctgctgaaacagtttgaggggatgcagcttcctgctgcctct
gagctagactggttagttccagaacatgatgctcctcagaagcttttgccaattccagac
tctcttccggtatctcctgatgatggtgagcacgctgatatttataaactacgaattaga
gtacgaggaaatttagaatgggcaccaccccggcctcaaatcatcttcaacattcaccca
tcacccaagagaaaggtggttgttgtcaaacaaaattaccgctgtgcaggatgtggtatc
agagtagagccagactacataaagagactacggtattgtgaatatctgggaaagtatttc
tgtcagtgctgtcatgagaatgtccaatcggtggttccaagccgcatattgcggaaatgg
gatttcagcaagtactatgtcagtaacttttccaaggatttgctgaataaaatatggaat
gatccactcttcaatgttcaggacattaacagtgctttatatcgaaaagtgaagtctctg
gatcaaatctacatgctgagaattcagcttgttcacatgaagaatttattcaaaacgtgc
cggttggcaaaagaatatggaatattgtcatgcttttgtagactcttggataactttgac
acaaaaccaggtcatctgactgaggatcttcacttgtactcactaaatgatctcactgct
gtgaagaaaggggaattggcaggaaggttgaaagaacttgtgaagataggagcagcacac
gtggagagctgcatgctttgtcaagcaaaaggcttcatctgtgaattctgtggtgatggc
actgatatcatctttccttttgaattgcacaaatgtaaacgatgtgaagaatgtaaagca
tgttaccacaagtgctgctttaaatcagatcaatgtccccgctgtgaccggttgcaggca
cgtaaagaactccttgctgaacagaccatagaattgtacttggagtcagaaggtgaagag
gaagtgagttcacagagtacaagttgtgactga
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