Chiloscyllium punctatum (brownbanded bambooshark): 140478942
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Entry
140478942 CDS
T11285
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140478942 (zfr)
Spliceosome [BR:
cpun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140478942 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
140478942
NCBI-ProteinID:
XP_072428707
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All DBs
Position
1:complement(114528592..114624819)
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AA seq
1043 aa
AA seq
DB search
MIPICPVVSFTYVPGRLGEDAKMATSNYFGFAHGGAAQYSQQPATGIAYSHPTTAGSYTV
HQAPVAAHAVTAAYAPAAAATAARPVPAAAAAAAAAAAATAAYGGYQTAHTAADYGYTQR
QQEAPPPPPPVTSQNYQDTYTYVRSTAPAIAYDSKQYYQQPAAAAQPQPTAAEAYYQAAA
KAGYSQAATQYTQAQQTRQVTAIKPATPNPTTTFTVYPVSTTVQPAAAAAATVVPSYTQS
GTYSSTAVTYTGATYAGYEAAVYSAASSYYQQQQQQQQQQKQAAAWAGTTFTKKVPFQNK
QKPKQPPKQPQIHYCDVCKISCAGPQTYREHLEGQKHKKKEAALKTTNQNSNTGTARGIQ
NQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMVSQTTTTTTAGT
SVKPAPPNPPTGSNSGTAPATATISPTVKPNPVAAVSVNNVANKLLVAKKTPTPKITFVG
GNKLQSTGTTTAVIEEVKAPEVKVATPPVQESKTEAVAEPMTTLAALQSDVQPVGHDYVE
EVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARK
IQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDIYWRRMEEEHHYWDDRRRMADGYPP
GLLGVRPGMMQPHGPLPPRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSNTERALKLV
SDCITEQDKPKNKEDEKKDAIKDRRDDSQRALKGVMRVGVLAKGLLLRGDKNVNLVLLCA
EKPTGTLLNRIAENLPKQLAVTTPEKYEVKCCIPDSAILLNSYTEPKMQVTITLTSPVIR
EENMRDGDVTSVMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLC
QRVPTWGALPSWAMELLVEKVISSASGPLSPGDAMRRVFECVASGILLPGGPGLYDPCEK
NPSDTLNSVTVQQREDITASAQFALRLVAFRQIHKVLGMDPLPQINPRFNVRNRKRRRDN
SDGTDGLEAEGKKDKKDFDSGEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtagtttctttcacgtacgtgcccggccggctaggcgaagat
gccaaaatggctaccagtaactactttggatttgcccatggtggtgctgcgcagtacagc
caacagccggccactggcattgcatactctcatccaaccacagctggcagctacacagtc
catcaggccccagtagctgcacatgctgtgacagcagcatatgctcctgcagctgctgct
acagcagccagacctgttcctgcagctgctgccgctgctgctgctgctgccgccgccaca
gcagcatatggaggatatcaaacagcacatactgcagcagattatggatacacacagcga
caacaagaagcccctccaccaccaccaccagtcacatcacaaaattatcaggatacctat
acatatgtgcgttccacagcgccagctatcgcctatgacagcaaacaatactaccaacaa
cctgctgctgcagctcagccacaacctactgctgcagaagcatattatcaagctgctgca
aaagcaggatatagtcaagctgcaacacaatacacacaagctcaacagactcgacaagtg
acagcgataaaaccagctacacccaacccaactactacctttactgtttacccagtgtcc
acaacagtgcaaccggctgctgcagcagctgctactgtggttccatcctatactcagagt
ggtacatacagctcaactgctgtgacttatactggagccacgtatgctggatatgaagct
gcagtgtattctgctgcatcttcctattaccaacaacaacaacaacagcagcagcaacag
aaacaagcagcagcttgggctgggaccactttcactaagaaagtgccatttcagaataaa
cagaaaccaaagcagccacctaagcaaccacagatccattattgtgatgtttgtaagatc
agttgtgctggaccacagacttacagggaacatttggaaggacagaaacataaaaagaaa
gaagctgctctgaaaactactaaccaaaacagcaatactggaacagctcgtggcattcaa
aatcaactgcgttgtgagctctgtgatgtttcttgcactggagctgatgcttatgcagct
catattcgtggagcaaagcaccagaaggtagtcaagttacataccaaacttggcaagccc
attccatcaaccgaacctagcatggtaagccagactacgactacaactacagccggaacc
tctgtcaagccagctcccccaaacccgcccacaggatccaatagtggtacggctcctgca
actgctacaatttctcccactgtaaagcctaatccagttgctgctgtatctgtgaataat
gttgctaacaagctgcttgttgcaaaaaagacgccaaccccaaagataacttttgttggt
ggtaacaagttgcagagtacaggaactactactgctgtaattgaggaagtcaaagcccct
gaggttaaagtggcaacaccacctgttcaggagagtaaaacagaggcagtagcggaacca
atgacaacacttgctgcattgcagagtgatgttcaacccgttggtcatgattatgtggaa
gaggttcgaaatgatgaaggcaaagtgattcgtttccattgtaagttgtgtgagtgtagt
ttcaatgacccaaacgcaaaagaaatgcatttgaaggggagaagacacagactgcagtat
aaaaaaaaagtaaatcctgaattacaagtcgaagtaaaaccaagcattagagcaagaaaa
atccaagaagaaaaaatgagaaaacaaatgcagaaggaagagtattggagacggagggaa
gaagaggagcgatggcgtatggaaatgaggcgatatgaggaggacatctactggaggaga
atggaagaggaacaccattattgggatgaccgtcgcagaatggctgatgggtatccacca
ggcctccttggtgtccgaccaggaatgatgcaaccccatggaccattacctcccaggcgc
ccagactcatcggatgatcgctatgtaatgacaaagcatgctgctatatatccaactgaa
gaggagctgcaagctgtccagaaaattgtttccaatactgaacgtgctcttaaacttgtg
tctgactgcatcactgaacaagataaaccaaaaaacaaagaggatgaaaagaaagatgca
atcaaagatagaagagacgatagccagagagctttgaaaggtgtcatgcgagttggtgtg
cttgccaaagggttgctgttacgtggggacaaaaatgtgaaccttgttctgctctgtgca
gagaaaccaaccggaacactgctaaatcgcattgcagagaacttgccaaagcagcttgcg
gtaaccactcctgagaaatatgaagtgaagtgctgcatacctgactctgccatactactc
aattcatatacggaaccaaaaatgcaagtcaccatcacacttacatccccggtcattaga
gaggagaacatgagggatggagatgtaacctcggttatggtgaaagatccaccggacgtc
ttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtggttccag
gctagagccaatggtttgcagtcttgtgtgattattattcgtatccttcgtgatctttgc
cagcgtgtgcctacctggggagcattgccaagctgggccatggaattgctggtggaaaag
gtaatcagcagtgcttctggaccacttagccctggtgatgccatgaggagagtttttgaa
tgtgtcgcttccggaattcttttaccaggcggtcctggactttatgatccttgtgaaaag
aaccctagtgatacactaaattcagtgaccgtacaacaacgggaagatatcacggctagt
gcacagtttgcactgagattagtagcattccgtcagattcacaaagtccttggaatggat
ccattacctcagattaatccacgtttcaatgtacgtaaccgaaagaggaggagggacaat
agtgatggcactgatggattggaagcagaaggaaagaaggataaaaaagattttgacagt
ggagaattttaa
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