Chiloscyllium punctatum (brownbanded bambooshark): 140479365
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Entry
140479365 CDS
T11285
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpun03036
]
140479365 (hfm1)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140479365 (hfm1)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Meiosis-specific proteins
Others
140479365 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
140479365
NCBI-ProteinID:
XP_072429377
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All DBs
Position
7:complement(116700512..116893821)
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AA seq
1327 aa
AA seq
DB search
MALTKFTNDIQVKYATGRSSGTLRAVTEIPAQFRNVFKEFPYFNYIQSKALDDLLYTEKN
FVICSPTGSGKTVLFELAIVRLLMQVPKPWSNIKIVYMAPIKALCNQRNEDWKEKFGPIG
LNCKELTGDTEMDDYFEIQDTHIIITTPEKWDTMTRKWRDNSLVQLVRLFLIDEVHVVKD
ECRGATLEVVVSRMKTAQLAVSRMCNHFNDKALRFVAVSATIPNVEDIAEWLSDGKGPGT
ATKIDESFRPVKLRKVVLGFPCSSTQTEFKFDLSLNYKMANIIQTYSEQKPALVFCATRK
GVQQAASVLAKDAKFIMTPDHKQRLQKYTNSIKDSKLRDLLIYGVGYHHAGMDVSDRKAT
EAAFTAGDVPVLFTTSTLAMGVNLPAHLVVIKSTVHYAGGMFQEYSETDILQMMGRAGRP
QFDTTATVVIMTRIQTKDKYTQMLDGVHTIESSLHKHLVEHLNAEIILNTITDVNVALEW
IRSTFLYIRAFKNPNHYGFSTRQGKAGIEAKLQELCLKNLHALSSIGLIKMDEEINFKPT
ETGRLMARYCIAFDTMKLFYLVTGSETLNELVRLICNCKEFTDVQLRVNEKKILNTLNKD
KNRITIRFPLEGKVKTNEMKVNCLIQAQLGCIPVQEFTLTQDIAKIFKCGVRVTKCLSEL
LMQQEKQNFMALLNAVILAKCFRAKLWENSTYVSRQLEKIGPTLSNAMVNAGLTTFQKIE
DTNARELELIVNRHPPFGNQIRESVLHLPKYELSVEQLARYHDSVAEIIVKITLTNYQQL
WEKRTAPDNHHISLIIGDADNQVVYKQKIIDSALLKSGSWMKKIEVKRAFKSEELSVNLI
SSEYVGLDIQQKYSVFYSGPKRFGTHIVHEKSDVQQSQSAKQKKTASPLMFPTINAVQGS
TNERSYTEPGKRHCNHYCKNKDKCGHECCKFGVLVGRSSTTPQPTTNFSSYLNDLKSRSE
TSSAPSIKRLKIQTMNEIGPVQTMNEIGPVNLQHFAYTKKAPLSTLPRYDETNLDPEAQA
QNQNNLDFNVRSCHKQQPQYYNEAPSQQNSTVFPSHQTSVESFSFNFTDANESDYWSPEE
MNVNFDLGDDLWNDFDDEKLVNASNSICSEEMNINEHYQTGREVSVNRSRQGVLVIQCPG
REVSVIQCPGREVSVIPCPGRGISYPVSRAGVIGYPVSRAGYQLSSVQGRWYRLSSVPGG
SIGYPVSRAGYQLSSVQGRWYRLSSVPGGGIGYPVTRAGGGGISYPVSGFGGVGDIGYPV
SRAGVSVIQCPGRVSAGPPGPGGGVTFGGHFGALSVCVRRSVRTCVGCRCSLSLGKSRLL
KTVLGRV
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggccctgaccaagttcacaaatgacatccaagtaaaatatgcaactggaaggagttca
ggaacattgagggcagttactgaaattcctgcacaattcagaaacgttttcaaagaattt
ccttacttcaactacatacaatcaaaagcactagatgatcttctttacacagagaagaac
tttgtgatttgttccccaactggttctggaaagactgtactatttgaactcgccatcgtc
agattactgatgcaagttccaaagccatggtctaatataaaaattgtatacatggctcca
atcaaagctttatgtaatcagcgaaatgaagattggaaagaaaagtttggacctattgga
ctgaactgtaaagagctaactggagacacagagatggatgactattttgaaattcaggac
actcatattatcataactactcccgaaaaatgggacaccatgacgagaaaatggagagat
aattcattggtacagcttgtgagacttttccttattgatgaggtacatgttgtgaaagat
gaatgtcgtggtgcaactcttgaagttgtagtcagccgaatgaaaacagctcagttagct
gtctcacgtatgtgtaatcacttcaatgataaggcactgagatttgtagcagtttctgca
acaattcctaatgttgaggatattgcagaatggttatcagatggaaaaggaccaggaact
gccacgaagatagatgaaagctttcgacccgtaaagctccgcaaagttgtacttggattt
ccttgctccagtactcaaactgaattcaagtttgatctatcacttaattacaaaatggct
aacattatacagacatattctgagcagaaacctgctctggtgttttgtgctacaaggaaa
ggtgtgcaacaggctgcatccgtacttgcaaaggatgccaaattcattatgaccccagat
cataagcaaaggttgcaaaaatatacaaactcaataaaggattcaaagcttagagatctg
ttaatatatggagttggttatcatcatgctggtatggatgtatccgatagaaaagcgact
gaagctgctttcactgcaggagatgtaccagtactttttactactagcactttggctatg
ggagtaaatttaccagcccatttagtggtaattaaatcaacagtgcattacgcaggagga
atgtttcaagaatacagtgaaactgatatacttcaaatgatgggccgagctggtcgacct
cagtttgacacaacagccacagtagttatcatgacaaggatccaaactaaggacaagtac
acacagatgttagatggagtacataccattgagagcagtttacacaagcatcttgttgaa
catttgaatgctgaaataatactgaatacaatcactgatgtcaatgttgctttggagtgg
atacgatcaacatttctttacataagagcttttaaaaatccaaaccactatggtttttct
actagacaaggtaaagctggaattgaagccaagttacaagaattatgcttgaagaattta
catgctttgtcttcgattggtttgataaaaatggatgaagagatcaatttcaagccgaca
gaaactgggagactaatggctcgttattgcattgctttcgacacaatgaaacttttctac
ttggtcactggaagcgaaactttaaatgaactggtaagattaatctgcaactgcaaggaa
tttactgatgttcaactcagagtgaacgaaaagaagattcttaacacgctgaataaagac
aagaatagaattaccatcaggttccctttagaaggaaaggtaaaaacaaatgaaatgaaa
gtaaattgcctaattcaagcccaattaggatgcattccagttcaagaatttacattgact
caagacatagccaagatttttaagtgtggtgtgagagttacgaaatgcctttcggaattg
cttatgcaacaagaaaaacagaactttatggcactattgaatgcagtgatcttagccaaa
tgttttagggctaaactttgggagaactcgacatatgtctccagacaacttgagaagatt
ggtcctactttgtccaatgcgatggtaaatgcaggccttactacattccagaagatagaa
gacacaaatgcaagagaattagagctgattgtaaacagacatcctccttttggaaatcaa
ataagagaatctgttcttcatctcccaaagtatgagctcagtgttgaacagcttgcaaga
taccatgattcagtggcagaaatcattgtgaaaattaccttaacaaattatcaacaacta
tgggaaaagagaacagcacctgacaatcaccacatttctctaatcataggagatgcagac
aaccaagttgtttataaacagaaaatcatagattcagccctgctgaaatcaggaagctgg
atgaagaaaattgaagttaaaagggccttcaaaagtgaagaattaagtgttaatcttata
agttctgaatatgttggtttggacattcagcagaagtattcagtcttttattcagggcca
aagaggtttggaactcatattgttcatgaaaagtctgatgtacagcagtcgcaatcagct
aaacagaaaaagacagcaagtccattaatgtttcccactattaatgcagttcagggttct
accaatgaacgaagctacacagaacctggaaaaagacattgtaatcattactgcaaaaat
aaagacaagtgtggtcatgaatgttgtaaatttggagtattggttggtaggagctccaca
acacctcaaccaacaacaaatttttcttcctatctcaatgatcttaaaagtagaagcgag
acttcatcagctccatcaattaaacgattaaagatacagacaatgaatgaaataggacca
gtacagacaatgaatgaaataggaccagtaaatcttcaacactttgcttacacaaagaaa
gctccattgtcaacattacctaggtacgatgaaacaaaccttgatccagaagctcaggca
caaaaccagaataatttagacttcaacgtaagaagctgtcacaaacaacagccacaatat
tataatgaagctccttcacaacagaattcaactgtgtttccatcacaccaaacttctgta
gaatctttcagtttcaactttactgatgcaaatgagagtgactattggtcgccagaagag
atgaatgtgaattttgacctaggagatgacttatggaatgactttgatgatgagaagtta
gtaaatgcaagcaattctatttgttcagaggaaatgaacattaatgaacattatcaaaca
gggcgggaggtatcagttaaccgttccaggcagggggtattggttatccagtgtccaggg
cgggaggtatcggttatccagtgtccagggcgggaggtatcggttatcccgtgtcccggg
cggggtatcagttatccagtgtccagggcgggggtaatcggttatccagtgtcccgggcg
gggtatcagttatccagtgtccagggcaggtggtatcggttatccagtgtcccaggcggg
agtatcggttatccagtgtcccgggcggggtatcagttatccagtgtccagggcaggtgg
tatcggttatccagtgtcccgggcgggggtatcggttatccagtaacccgggcggggggg
ggaggtatcagttatccagtgtccgggtttgggggggtgggggatatcggttatccggtg
tcccgggcgggggtatcggttatccagtgtccagggcgggtaagtgccggtcctccgggg
ccggggggcggagttactttcggcgggcattttggcgctttgtccgtttgtgtgcgtcgc
tcggtccggacttgtgtcggttgtcggtgttcactttccttgggtaagagccgccttttg
aagacggtgctgggccgtgtgtga
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