Chiloscyllium punctatum (brownbanded bambooshark): 140479729
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Entry
140479729 CDS
T11285
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140479729 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140479729 (prpf38b)
Spliceosome [BR:
cpun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140479729 (prpf38b)
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GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
140479729
NCBI-ProteinID:
XP_072429886
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Position
7:62507663..62538424
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AA seq
544 aa
AA seq
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MANKTAIGNHQQQQQQAGGSVKPASSIKQGNVLPLWGNEKTMNLNPLILTNILSSPYFKV
QLYELKTYHEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYK
LFTLKLTRKQVMGLITHTDSPYIRGLGFMYIRYTQPPADLWDWYEPFLDDEEELDVKAGG
GCVMTIGEMIRSFLTKLEWFSTLFPRIPVPVQKNLDQYLKTRPRKIAKKDGKDSMEEPER
LSERRHSRSPRRSLTPRKSPRRSRSRSRHREGHGSFGFDKELERERERQKREREQIKDRE
RSEKDRHKSRSTDRGLDRRRSRSRDHHRSRSRDKRSTKKDREREKENERSRRRDKDYEKD
KERVSDRDRDRNVEKDSERSRDRDKRSQSKTEDRKRKEEKREKDEKRHKDDKKDSKKDKR
HSRSRSREKRHRSNSPGRGHVSKRSRSKSKEKSKHRNEHKEKSNKRSISRERTDENNGER
IKKQRSHSKEKAHKRSQSKERSHKQGHSDGKDHSSKLSRRSLSTERENKSNAEGLLQGNT
TDND
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaaacggccattggaaaccaccagcaacagcagcagcaagcggggggaagt
gttaagccggcctcctccattaaacagggcaacgtgctgccactgtggggcaacgagaag
accatgaacctcaacccgctcatcctcaccaatattctctcctcaccctactttaaagtg
cagttgtatgaactgaaaacctaccatgaggttgtagatgagatctatttcaaggtcact
catattgaaccatgggagaaggggagcaggaagactgcaggccagacaggcatgtgcgga
ggggtacggggtgttggaacaggaggcattgtttctactgccttttgtctgctctacaag
ctatttaccctaaagttaactcgtaaacaagtgatgggtctaataacacacactgactct
ccgtacatccgaggtttgggattcatgtatattcggtacacacagcccccagctgatttg
tgggattggtatgaaccttttttagatgatgaagaggagctagatgtaaaggctggtgga
ggatgcgtcatgacaataggagagatgattcgttccttccttactaaactagaatggttc
tctaccttatttccaagaattccagttcctgttcaaaagaatttggaccagtatcttaaa
actcgaccaaggaagattgccaaaaaagatgggaaggatagcatggaagagccagagcgc
ctttcagagcgtagacattcaaggtcaccaagaagatctcttactcctcgtaaatctcct
agacgatctagaagcagaagccgtcatagagaaggccatggctcttttggttttgataag
gaattagagagagagagagaacgacagaaaagggaacgagaacagataaaagacagagag
cgaagtgagaaggatagacataaatctagaagcaccgaccgaggtttagaccgtaggcgg
agcagaagcagagaccaccacagaagtcgcagtagagataaaagaagtactaaaaaagat
agagagagggagaaggaaaatgaaagaagtagaaggcgagacaaagattatgaaaaggac
aaagaaagagtgagtgatcgagacagggacagaaatgttgagaaagattctgagagatca
agagaccgggataaaagaagtcaatcaaagactgaagacagaaaacgtaaggaagaaaaa
agagaaaaagatgaaaaaagacacaaggatgataaaaaggattcaaaaaaagataaaagg
catagtagaagcaggagcagagagaaaagacacagaagcaatagtcctggtaggggtcat
gtcagcaaacgtagtagaagcaaaagcaaagagaaatctaaacatcgaaatgaacataaa
gaaaaatcaaataaaagaagcattagcagagaaaggactgatgagaataatggtgaacgg
ataaagaaacagcgtagtcatagcaaagagaaagctcacaaacgcagtcaaagtaaagaa
cgatctcacaagcaaggtcacagtgatggtaaggaccattcaagcaaactaagccgccga
agtctcagtacagaaagagagaacaaaagcaatgcagaaggactattgcaaggcaatacc
actgacaatgactga
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