Chiloscyllium punctatum (brownbanded bambooshark): 140479923
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Entry
140479923 CDS
T11285
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140479923 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140479923 (prpf38a)
Spliceosome [BR:
cpun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140479923 (prpf38a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
140479923
NCBI-ProteinID:
XP_072430409
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All DBs
Position
7
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLIEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYIGGV
YGGNIKPSPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGSAIDCYKYL
EPLYNDYRKVKRQKRDGDFELIHVDEFMDELLHEERVCDIILPRLQKRYVLEEAEMLDAR
VSALEEDMDDVDTSEDEDEDDDKGDRVPSPEPPRRGYRDLDRPRRSPSPRYRRSRSKTPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgaactgttaaagatgctcatagcatccatggaaccaacccacagtatttg
atcgagaaaattatccggacccgcatctatgagtctaagtactggaaggaggaatgtttc
gggctgacagcggaattggttgtggataaagctatggaactgaaatatattggtggcgtc
tatggtgggaatattaaaccatctccattcctttgtctgacccttaaaatgcttcaaatt
cagcctgaaaaggatattattgttgaatttataaagaatgaagattttaagtatgttaga
ctgttgggtgcattgtacatgcgactgacaggttctgccattgattgttataaatatctg
gaaccactctataatgattatcgcaaagtgaagaggcagaagagagatggagattttgaa
cttattcatgtggatgaatttatggatgagctactccatgaagagcgagtttgtgatatt
atcttgcccagacttcagaaacgctacgtgttggaagaagcagaaatgctggatgctcga
gtcagtgcattggaggaagatatggacgatgtagacacaagtgaagatgaagatgaggat
gatgataagggtgacagagttccatcaccagagcctccacgacgcggctaccgtgatctt
gatcggcctcgaagatcaccatctccacgatatcgaagaagtcgaagcaaaacaccaaga
cgtcgaagcagatcccctaagcgaagaagcccatcgccacgtcgtgaaagacatcgcagc
aaaagtcctagacgtcatcgtagtcgatctagagatcgacgtcacagatcacgatccaaa
tcgcctggtcaccacagaagccacagacacagaagtcattctaaatcacctgaaagatca
aagaagagtcacaagaagagtcgaagaggaaatgagtga
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