Chiloscyllium punctatum (brownbanded bambooshark): 140480011
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Entry
140480011 CDS
T11285
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140480011 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140480011 (rad54l)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
140480011 (rad54l)
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
140480011
NCBI-ProteinID:
XP_072430599
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Position
7:complement(104362135..104402956)
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AA seq
741 aa
AA seq
DB search
MRRSLAPSQLAKRKPGQLSDDEDVGPKRRKLICERDNDENFVSPFRKPLAQLTNRPVCLD
SSQHEAFIRSILAKPFRVPIPNYTGSLGLKALGIKRAGARRSLHDPYEEDALVLYEPPPL
SAHDQLKADKEKLPVHVVVDPILSSVLRPHQREGVKFMWDCVTGRRISNGFGCIMADEMG
LGKTLQCISLMWTLLRQSPDAKPEIEKVIVVTPSSLVKNWYNEVEKWLGGRLHALPIDGG
TKTEIDQKLATFMNQHGLRIPTPILIISYETFRLHADVLCKGSVGLVICDEGHRLKNSDN
LTYQALNDLKAKRRILISGTPIQNDLLEYFSLVHFINAGILGTAQEFKKRFELPILKGRD
ADASDSERQHGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQIVCCRLTPLQSELYKL
FLKQAKPAIEMEQAHSGKMSVSSLSSITSLKKLCNHPTLIYEKCVEGEEGFQGALNLFPS
GYSTKSVEPQLSGKMLTLDYILAMTRSTSSDKVVLVSNYTQTLDLFEKLCRDRRYLYVRL
DGTMTVKKRAKIVERFNNPTNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA
MARIWRDGQKKICYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKE
LFTLNETTASDTHDRLKCRRCVNGHQVRRPPEGSDCTSDLSQWNHCADKRGLRDMVLQSA
WDAAISFVFHHHSHEQQHGVI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagtctagccccgagtcagcttgccaaacgaaagccgggacaactatctgat
gatgaggatgtgggtccaaagcgccgcaagctgatatgtgaacgagacaatgatgaaaat
tttgtgtcgccatttcggaaaccgctagcacagctgactaatcgacctgtgtgtcttgac
agcagccagcatgaggctttcatccgtagtatcctggccaaacctttcagagtgcctatt
ccaaactacacaggttcccttgggctgaaggcattgggaattaagcgtgcaggagccagg
cgatctcttcatgatccatatgaagaagatgctttggtactttatgaacctccgcctctg
agtgcacatgaccaactaaaagctgacaaagagaagctaccagtacatgtggtggtcgat
cctatcttatcctctgttttaagaccacatcagagagagggtgtgaagttcatgtgggat
tgtgtgacaggtcgtcgtatttcaaatggctttggctgcattatggcagatgagatggga
ctggggaagacattacagtgcatttccttgatgtggacgctcttgcgacaaagcccagat
gccaagccggaaattgagaaagtcattgttgtgactccatccagtttggtgaaaaactgg
tataatgaggttgagaaatggctgggaggaaggttacacgcattgcctattgacggagga
actaagacagagattgaccagaaactagccacattcatgaaccagcatgggttacgaatt
ccaactccaatcctcataatttcttatgagacattccggctacatgctgatgtgctctgc
aagggttctgtcggcttggtcatttgtgatgagggccacaggttgaagaattcagacaac
ctgacctaccaggctctgaacgatctaaaagctaaacgacgtatattgatctcaggaact
ccaattcagaatgacctcctggagtacttcagtcttgtacattttattaatgcaggaata
cttggaactgcacaggaatttaaaaagcgatttgaattgcctatcttgaaaggccgagat
gcagatgcaagtgacagtgaaagacagcatggagaggagaaactaaaggagctgatcagc
attgtaaataggtgtttaattcgaagaacatcggatattctttccaaatacctgccagtg
aagattgagcagattgtctgttgcagactcacgcctctgcagtcagagttgtacaagctg
ttcctaaaacaagccaagccagcaatagaaatggaacaagctcacagtgggaagatgagc
gtctcctctctatcttcaattacttcactaaagaagctttgtaaccacccaacattgatc
tatgaaaaatgtgtggaaggtgaggaaggatttcagggagcactcaatctctttccatca
ggatatagcacaaaatctgtggaacctcagttgtctggcaagatgctcacccttgattat
attttggccatgactcgaagtactagctctgataaggtggtgctagtatcaaactacacc
cagactcttgatttgtttgagaagctctgcagagacaggagatacctgtatgttcgattg
gacggtaccatgacagtgaaaaagagggctaaaattgtggaacgctttaataatcccaca
aatcctgagtttatcttcatgctgagtagcaaagctggtggctgtggcttgaatctgatt
ggtgcaaatcggttagtcatgtttgatccagactggaatccagctaatgacgaacaagcg
atggctcgtatatggcgagatggacagaagaaaatttgctacatctacaggcttttgtcg
accgggacaattgaggagaagatcttccagcggcagactcataaaaaagctctgagtagc
tgtgtagtggatgaggagcaagatgtggaacgacacttctcccttggagaacttaaggag
ctctttactctaaatgagaccacagccagtgacacgcatgataggttaaaatgtcgccgt
tgtgtaaatggacaccaggtgcgtcgtcctcctgagggctcagactgtacatccgatctt
tctcagtggaatcactgtgcagataaacgtggactacgagacatggtccttcagtctgct
tgggatgctgccatttcctttgtgtttcatcatcactcgcatgagcaacagcatggagtt
atataa
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