Chiloscyllium punctatum (brownbanded bambooshark): 140480013
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Entry
140480013 CDS
T11285
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpun03032
]
140480013 (pif1)
03029 Mitochondrial biogenesis [BR:
cpun03029
]
140480013 (pif1)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
140480013 (pif1)
DNA replication proteins [BR:
cpun03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140480013 (pif1)
Mitochondrial biogenesis [BR:
cpun03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
140480013 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
Herpes_Helicase
UvrD_C_2
Viral_helicase1
PhoH
Mg_chelatase
AAA_7
ABC_tran
RsgA_GTPase
AAA_16
AAA_5
NACHT
AAA_24
AAA_29
Motif
Other DBs
NCBI-GeneID:
140480013
NCBI-ProteinID:
XP_072430603
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All DBs
Position
7:complement(104419589..104459319)
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AA seq
644 aa
AA seq
DB search
MLSASSGAEVQCNITIEYLNPAGQATKRKTIRNAIVTLGRNEFRDILLRVHDGKLSQSFV
LREIQLFTQFIRDGKSSIKLIPDNIQILVSNCPPDNLKVLFKTLSVKYAADKKASKPVSE
RTRLLSTLPRTFDTISPVQVQDMERANGLKSQRTVQTPISTKGLKNRINDVGPSRNIKRP
RSISSENCLVTELKSVKKPTLSMPSGRKLTKEQSQILSMILKGKNVFFTGSAGTGKSFLL
KRIVGALPPKSTYATASTGVAACHIGGTTLHAFAGIGSGKAPLHQCVELAQRPGIKKHWQ
NCRHLIIDEISMVEGEFFDKLEAVARIVCKRDEPFGGIQLIVCGDFLQLPPVSRNKEKYK
LCFQAKSWQKCIQVNLELTEVRRQTDKKFIAILQSIRLGKCPEEVAVQLINTANQKIDRD
GILATRLCTHKDDVKLTNEHRLQQLPGELHTYQAIDSDPMFVQTLNTQCPVGQTLQLKKG
AQVMLTRNLDIDRGMVNGARGVVIGFEPGNQSLPQVRFLCGVTETIRPERWMVKALGGSY
LTRHQLPLKLAWAISIHKSQGMSLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDR
RVVHANADVLHFYGKLKKEKALMQSSLDGYIEIENQENKIPGGL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgcctcttcaggagctgaggtccagtgcaacattacaattgaatacctcaac
ccagctggccaggcgaccaagcgcaaaacaattcgcaatgccattgtcaccctcgggcgc
aatgaattccgtgacatccttctccgggtacacgatggcaagctatctcaaagctttgtc
ctacgtgaaatccaacttttcacacagtttattcgggatggaaagagttccatcaaactg
attcctgataatattcaaatcctagtttcgaactgtccaccagataaccttaaagtactc
tttaaaactctttccgtaaaatatgctgcagataagaaggccagcaaaccagtcagtgag
cgaacccggctgctgtccacactcccaaggacatttgatacaatcagcccagtacaagta
caggacatggaaagggctaatgggcttaaatcacagagaactgtgcaaacaccaatttca
accaaggggctgaagaatcgaataaacgatgttgggccaagcagaaacataaaacgaccc
cggagcatctcatcagaaaactgtctggtcaccgagctaaagtctgttaaaaagcccacg
ttgtcaatgccaagtggacggaagctcacaaaggaacagtcacaaatccttagcatgatc
ctgaaaggaaagaacgtcttcttcactggaagtgctggaactggaaaatcatttttactg
aagagaattgtgggagcattgccaccaaaaagtacttatgcaacagcgagtactggagtg
gctgcctgtcacattggaggaacaactctccatgcatttgcaggaattggttcaggaaaa
gctcccttacaccaatgtgtagaacttgctcagagacctgggattaaaaaacactggcaa
aactgcagacaccttatcatagatgaaatctccatggtagaaggagaattctttgacaag
cttgaagcagtggccaggattgtttgtaaaagagatgagccatttggtggaatccagctt
atagtttgtggagattttctacagcttcctcctgtgtcccgaaataaagaaaaatacaaa
ctttgtttccaggctaagagttggcagaaatgtatccaggtgaacctggaactaacagag
gtccgaaggcaaactgataaaaagttcattgcaatattgcagtctattcgtcttgggaag
tgtccagaagaagttgcagtccagttgatcaacacagccaaccaaaaaattgatcgagat
ggaatcttagcaacgcggctttgcacacacaaggatgatgtgaaattgactaatgaacac
aggctccagcaattaccaggggagttgcacacatatcaagctattgacagtgatcccatg
tttgtacaaacattaaatacccaatgtcctgttggtcagacactgcagctgaagaaaggg
gctcaggtgatgctgactagaaacctggacattgacaggggaatggtaaatggtgctcga
ggtgttgtcattggctttgaacctggaaaccaatcacttccccaggtgagatttttgtgc
ggtgtaacggagacgataaggccagaacgttggatggttaaagctttaggtggatcctac
ttgacgagacaccagctgcctctgaagttagcctgggccatctccattcacaagagtcag
ggtatgtcattagactgtgtggagatctctctggcacgtgtgtttgaaagcgggcaggca
tatgtggcactctctcgtgctcgaagcttggaaggtcttcgagtgatggactttgacagg
agagtggtgcatgctaatgctgatgtcctgcatttttatggcaaattaaaaaaagagaag
gccctgatgcagtcttcactggatggttacattgaaatagaaaatcaggaaaacaagatt
cctggaggactatag
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