Chiloscyllium punctatum (brownbanded bambooshark): 140480557
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Entry
140480557 CDS
T11285
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140480557 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140480557 (tex10)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
140480557 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
MMS19_N
MMS19_C
DOP1_C
HEAT_GCN1
TOR1L1_N
Cnd1
HEAT_GCN1_C
TPR_DNAAF5
HEAT_EF3_N
HEAT_DAAF5
Nuc_sug_transp
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
140480557
NCBI-ProteinID:
XP_072431652
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Position
8:51692215..51794778
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AA seq
925 aa
AA seq
DB search
MTKKRKRQDDFQKVKLKVGKRKPKADNVTNTKFKTRAIHVPQQLKSDASLPTNHRKLNIK
DLLTQLHHYSSGIKQSALIGLKDLVSQHPSVITSHLSNILSDVAAVFTDKDPTVRSATVQ
LLNFLAPRISGEQMAPFYPLVCAHLSSAMTHIVEGIQEDALKILDVLLEHYPELLTDHSS
ILLKNFLELISHQKLTKELKAGGKISCWMLSVNPNRRVTSQQWRLNVLSRLRKFLQAIVE
GSSQSVENEAIFETDDRIGSEHVTTLQVSWENYITGQQRIQLYEHSGSQPSTVIPFRLRP
LDTEGLSSLENLKGFVQILVPLLLDCWMEASQAQLTGAIPSNLLEPEAMNLKLQVLSIIQ
LLWKLMQRQDESQKLESWLRNHYLSDFKDQFIKNFPYSVLETAGHKKKDGVKKDKQAATF
MNNTDHPLALNLALCQVMVSLTSALTVHLDADWLEQIRKFVSESLSDGRKLTSQQLNGML
MLVWRLVLVQCNRGSTEELLRAVYTQYQQQGLSLAVRTMLLNFFSGLYLREKTSNLQFAR
SKVLTRWLAGLPLQLAQLGSRNPLLSVQLIDVIHAAAARSNKELLQSLQSNVYRLYDPQD
GTLVLLPSEAQRSLVQLVYFLPFISSELLSCLSRCCTMGRVTSKLAISLIRILHTRSSFG
GWTCSLPESLVNDVNYFSFLFSTLTGFSGEELTWLQSSTSNPHISQSQFSSVRLYVTDLD
QFAHHWALTEVICQCLSAIPSRIQCCDILQSAICKHLVSVHLLPDSTAGSILKAVGQLID
PAFIPNECLLNFLAECCYSILYFILTLERNSRGNAQKRELLWGSCLTALVRIPRLLRLML
QSLRVTDTCQEELPVVAQILRLLLQQVQLRQHMVANAALVQQVIQDITNFKAEDFQEQWL
IDLHYCFRLYLTTQHRNSANFTVTY
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagagaaagcgtcaagatgactttcaaaaggtgaaacttaaagttggcaaa
aggaaaccaaaagcagacaatgtaactaataccaaattcaaaacacgtgccatccatgtt
ccacagcaactgaagagtgatgcatcattaccaacaaatcaccgtaaacttaatataaag
gatctgctgacacagttgcaccactatagttcgggcattaaacagagtgctctgattggt
ctaaaagaccttgtatcgcaacatccatcagtaatcacatctcacctctccaatattctc
agtgatgtagcagctgtgttcacagacaaagaccccaccgtgagatcagcaactgttcaa
cttttaaactttctagctcctcgaatctctggtgagcagatggcccctttttatcctttg
gtttgtgcacatctttctagtgcaatgacgcacatagtagaagggatacaagaggatgcc
ttgaagatcttagatgttttgttggaacattaccctgaacttcttacagaccatagcagc
atcctgctgaagaattttctggagctaatttctcatcagaaattgacaaaggaattgaaa
gctggaggaaaaatatcttgctggatgttatctgtcaacccaaaccgccgggttacttct
cagcagtggcggctcaatgtattgagtaggttaagaaaattcttacaggcaattgttgaa
ggttcaagccaatctgtggagaatgaagccatttttgagactgatgacaggattgggtct
gagcatgtgaccacattgcaggtcagctgggagaattacataactggacaacagcgtata
cagttgtatgaacactctggatctcaacccagtactgtgattccgttcaggctaagacct
cttgacactgaaggtttgtcctctttggaaaatctgaaagggtttgttcagatactcgta
ccccttcttctggactgttggatggaagcctctcaggctcagctaacaggcgctatacca
agtaacctacttgaaccagaagccatgaatcttaagttgcaagttctcagcatcatccag
ctattatggaaactaatgcagcgccaagatgaaagtcagaaactggaatcctggctacgg
aatcactatctctctgattttaaagatcagttcataaaaaattttccttattctgtgttg
gaaacagctggacataaaaagaaagatggagtaaagaaggacaaacaagcagcaacattc
atgaacaatacagaccatcctcttgcattgaaccttgccttgtgtcaggtcatggtgtca
ctcaccagtgctttaactgtccatctggatgctgactggttagagcaaattcgaaaattt
gtctccgaaagcttgtcagatggcaggaagttgacctctcagcaactgaatgggatgctg
atgttggtgtggagacttgtacttgtacagtgcaacagaggttccactgaagaactgttg
agggcagtttacacacagtatcagcagcagggtctttcacttgcagttcgcactatgctg
cttaacttctttagtggtctttatttgagagagaaaacttccaatcttcagtttgcgaga
agcaaggtgctgacacgttggctagctgggctgccattacagttggctcaacttggttca
aggaatccacttctctcagtacaattgattgatgtgatacatgcagcagctgctcgctcg
aacaaagaacttcttcagagcctccagagtaatgtctacaggttatatgatccacaagat
ggcactctggtcctacttccatctgaagcacagcgttctttggtgcagcttgtttatttc
ttaccgtttatttcatctgagttattgtcttgcctcagtcgttgttgcaccatgggaaga
gtgacctccaaactagccattagtcttattcgtatactacatacaagatcatcttttgga
ggatggacttgttcgcttccagaaagtctagtgaatgatgtgaattacttcagttttctg
ttttctacattgacaggattctcaggagaagaattgacttggctccagagcagcaccagt
aatcctcatataagtcagtcccagttttcgtcagtgcgtctttatgttacggatcttgat
cagtttgcacaccactgggccttgactgaggtgatatgtcaatgtttatcagccatacca
tccagaatccagtgctgtgatattttacaaagtgccatttgtaagcatctggtgagtgtt
catctcttgccagacagcaccgcagggtcaatcttaaaagcagttggtcagctcatagat
ccagcctttattcctaatgagtgtttgttgaatttccttgctgagtgttgctacagtatc
ctttacttcatactaactttggaaaggaacagcagaggaaatgcacaaaaaagagaattg
ctgtggggatcatgccttactgcattggtccgcataccccgcctgctacgactgatgctg
cagagtttgcgagtaactgacacctgccaggaggagcttcctgtcgttgcgcagatcctt
cgtcttctgcttcaacaagtacagcttaggcagcatatggtagcaaatgcagcacttgtg
caacaggtcatacaggacatcacgaacttcaaagctgaagatttccaagagcagtggtta
attgaccttcattattgcttcagactctaccttacaacacagcacagaaattcagctaat
ttcacagtgacctattga
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