Chiloscyllium punctatum (brownbanded bambooshark): 140481179
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Entry
140481179 CDS
T11285
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04810
Regulation of actin cytoskeleton
cpun05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
140481179 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140481179 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140481179 (cyfip1)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140481179 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
140481179 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
Motif
Other DBs
NCBI-GeneID:
140481179
NCBI-ProteinID:
XP_072433068
LinkDB
All DBs
Position
9:18793898..18979550
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEDLPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIDRFCNEVKRLCHTERRRDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSDPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGYEELLAD
IVNICVDYYENRMYLTPGEKHMLLKVMGFGLYLMDGTVSNIYKLDAKKRINLNKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWASTSSSSSPQYNIVEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQESQKTDAEYQKLSELALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQNFAQKTLREPLRQAIKKKKNVIQSVLQAIRKTICDWDVGHEPANDPALRGEKDPR
GGFEIKVTPRAVGPSSTQLYMVRTMLESLIADKSGAKKTLRSSLEGPTILAIEEFHRHSF
FYTHLLNFSETLQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNQGANIPTPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSL
ELAITRFESEDITSIVELEGLLEVNRMSHKLLSKYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTQRFVRTVLPFSQEFQRDKQPNAQPQYLYGTKALNLAYSS
IYSNYKNFVGPPHFRAICKLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRIHVKEGERLDTKMKRLEAKYAALHLVPLIERLGTPQQVAIAREGDL
LTKERLCCGLSMFEVILTRIRQFLDDPIWRGPLPTNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIITLLGQQRRFDVLDFCYHLLKVQKHDGKDDVLKNVP
LKKMVDRIRKFQILNDEIFAILNKYLKSGDSENVPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaagtgactttggaggatgccttatccaacgttgaccttctggaagactta
ccattgcctgatcaacagccttgtattgaaccaccaccttcatcacttttgtaccaacca
aatttcaacaccaactttgaagatagaaatgcatttgttacaggaattgcaagatacatt
gagcaagcaacagttcattccagcatgaatgaaatgctagaggaggggcaggaatatgct
gttatgctgtatacttggagaagttgttcaagagctattcctcaggttaaatgcaacgag
cagccaaatagagtagaaatttatgaaaagacagtggaggttcttgagccagaggtcact
aagcttatgaatttcatgtatttccagcgcaatgcaattgatcggttttgtaatgaggtg
aaacgactctgtcatacagagaggaggcgagattttgtttcagaagcttatcttctcaca
ctgggcaaattcattaacatgttcgcagtattggatgaattaaagaacatgaaatgcagt
gtgaaaaatgaccactctgcgtacaaacgagctgctcaatttcttcggaaaatgtcagac
ccacaatccatacaagaatctcaaaatctctccatgtttcttgcaaaccataacaaaatt
actcagtcgctgcagcagcaacttgaagtcattccaggctatgaagagcttcttgctgac
attgtaaatatttgcgttgattattatgagaatagaatgtaccttactcctggtgagaaa
cacatgctgctcaaggtgatgggctttggactttaccttatggatggaactgtaagcaat
atatacaagcttgatgccaagaagcgaataaatttgaacaagattgacaaattttttaag
caattgcaggtggtgcctttatttggtgacatgcagatcgagttggccaggtacatcaag
acaagtgctcattatgaggaaaacaaatcaagatgggcctccacatcttccagtagtagc
cctcaatacaacattgtggaacaaatgattcagatccgggaagatcacatgcgtttcatc
tctgaactggctcgctatagcaatagtgaggtagtaacagggtcaggtcgacaagaatct
cagaaaactgatgctgaataccagaagctgtctgaacttgctttacagggcatgcaacta
ttgtcccaatggagtgctcacgttatggaagtgtactcttggaaacttgtgcatcccact
gataagtactctaataaagactgcccagacaatgcagaagagtatgagagagcaactaga
tataattacacaagtgaagagaagtttgcacttgttgaggttattgccatgataaaagga
ttgcaggtgctgatgggcagaatggagagtgtgttcaatcatgcaattcgacataccatt
tacgctgcgctccaaaactttgctcagaaaacacttcgtgagcctttgcgtcaggctatc
aagaagaagaagaatgtgattcagagtgttctgcaagcaattagaaagactatttgtgat
tgggacgtcggacatgagccagcaaatgatcctgcactccgaggagagaaagatccgaga
ggaggctttgagatcaaagttactccccgggcagttggaccatctagtacccagctctac
atggttagaactatgctagagtccctcattgctgacaaaagtggcgcaaagaaaaccttg
agaagtagtcttgagggccccaccattttggcgatagaagaatttcaccggcattcattc
ttctacacgcatttgctcaatttcagtgaaactcttcagcattgctgtgatctgtctcag
ctttggttcagagaattcttccttgaactgactatgggcagaagaatccagtttccgatt
gagatgtctatgccatggattttgactgaccatattttggagaccaaagaagcctcaatg
atggagtatgtattatattccttggacctttacaatgacagtgcccattatgcactgact
aaattcaagaagcagttcctttatgatgagattgaagcagaggtaaacctctgctttgac
caatttgtatataaattggctgatcaaatatttgcttactacaagattctggcaggaagc
ctccttctggacaaacggctgcgagcagagtgtaagaatcagggagctaatattcctaca
cctccatcaaatagatacgagactttattgaaacaaagacatgtacagcttcttggtagg
tcaatagacctgaatcggctgatcactcaaagaatttcagcagcgatgtacaaatcgtta
gaattggcaattacacgatttgagagtgaagacatcacctctattgtggaacttgaaggt
ctgttagaagtcaaccgtatgagtcacaagctgctcagtaaatacttaaccctggacagt
tttgatgctatgttcagggaagccaatcacaatgtatctgcaccatatggaagaataact
ctccatgttttctgggagttgaattatgatttccttccaaactactgctacaatggttcc
acacaaaggtttgtgcgtactgtgctgcccttctctcaagagtttcaaagagataaacaa
ccgaatgcacagcctcagtatttatatggaactaaggctctgaacttggcatacagcagc
atttacagcaactacaaaaattttgtgggtcctccacattttagagcgatttgcaagctt
ctgggctatcaaggaattgctgtggtaatggaggaactgctcaaagttgttaaaagccta
ctacaaggaaccattttgcaatatgtgaagactttaatggaagtgatgcctaaaatctgc
cgtttacccagacatgagtatggttcaccaggaattctggaattcttccatcatcagctg
aaagacattgtggaatatgcggaactgaagactgtgtgttttcaaaatttacgagaagtt
ggcaatgctgttcttttctgtcttcttattgagcagagtctgtctctggaggaagtctgt
gacttgctacatgctgcaccattccagaatattttgccaagaatccatgtcaaagagggt
gagcggctagacacaaagatgaagagactggaggctaaatatgctgcacttcatcttgtt
ccactgatagaacgacttggaacacctcagcaagttgcaattgcaagagaaggggatctg
ctgacaaaggaacggctgtgttgtggtctctccatgtttgaagtgattctgacacgaatc
cggcagtttctggatgatcccatatggcgtggacctcttccgactaatggagtaatgcat
gtggatgaatgtgtggaatttcacaggctgtggagtgccatgcagtttgtgtactgtatt
ccagtgggagcacatgaattcactgtagagcagtgctttggagatggactgcactgggct
ggctgtatgatcattacactgcttgggcagcaacgccgatttgatgtccttgacttttgt
tatcatttgctcaaagttcagaagcatgatgggaaagatgatgtcctcaaaaatgtgcct
ttgaagaaaatggttgacagaattcgcaaattccaaattctcaatgatgagatctttgct
atcttgaataagtatctgaagtcaggtgatagtgagaacgtacctgtggaacacgtccgc
tgtttccagccacctattcatcagtcgttggcaagctcatga
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