Chiloscyllium punctatum (brownbanded bambooshark): 140481244
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Entry
140481244 CDS
T11285
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140481244 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140481244 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpun04147
]
140481244 (vps36)
Membrane trafficking [BR:
cpun04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
140481244 (vps36)
Exosome [BR:
cpun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140481244 (vps36)
Exosomal proteins of colorectal cancer cells
140481244 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF1351
Motif
Other DBs
NCBI-GeneID:
140481244
NCBI-ProteinID:
XP_072433239
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All DBs
Position
9:29029783..29088671
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AA seq
410 aa
AA seq
DB search
MDRFVWASGLLEINETLVIQQRGVRLYDGDDKTKFDLGTVLLSTHRLLWRDHKKHDCCIA
LPLSQIIFFEEQAAGIGKRSDCSQNNFETLDFYKSTFSVLLPSAKIVVHLQPVTLNKEPG
PYQSSKYSYIKLSFKEHGQIEFYRRLSEELSQKRWERISVSQPMQSPSRSQAGKVKAVGI
VGIERKLEEKRKETDKNISEAFEDLSQLMKKAKEMVDLSKLIANKIKDKQGDISEDETIR
FKSYLLSMGIANPVTRETHGSGTHYHLQLAKQLVEMLQVPVEEQGGMMALTEVYCLTNRA
RGMELLSPEDLVNACKMFEALNLPMRLRIFDSGVMVVQLQSHSEDEMIASAVETVSEKGF
VSSEEYAKLVGISVLLAKERLLLAEKVGHLCRDDSVESLRFYPNLFLTQD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgtgtgggcgagcggactgttggaaattaacgagaccctggtgatacag
cagcgcggagttcgcttgtatgacggtgacgacaagacaaagtttgacttggggactgtt
cttcttagtacacacagattactatggagagaccataaaaagcatgattgctgcatcgct
ttgcctttgtcacagataattttctttgaggaacaggctgctggaataggaaaaaggtca
gactgcagtcaaaataattttgaaacattggacttctacaaatccaccttctctgtcctt
ttaccaagtgccaaaatagtagttcaccttcaaccagttactctcaacaaagaacctggt
ccatatcagagtagcaagtactcttacatcaagctgtctttcaaggaacatggacagatt
gagttttatagacgattatcagaagaattgtctcaaaagcgatgggagcgaatttcagta
tctcaaccaatgcagtcacccagtagatcacaagcaggaaaagtgaaggctgttggaatt
gtgggtattgaaaggaagttggaggaaaaacgaaaggagaccgacaaaaacatctctgaa
gcttttgaagatctcagtcagcttatgaaaaaggccaaagagatggttgatttgtcaaaa
ttaatagcaaacaaaatcaaagataagcaaggagatatttctgaggatgagactatccgt
ttcaagtcctatttgctgagcatgggcatagctaatccagtgaccagagaaacgcatgga
tctggaacacattaccacttgcaactggctaaacagctggtggaaatgttgcaagtacca
gttgaggaacaaggtggaatgatggcgctgacggaggtttattgcttgacaaatcgagct
cgagggatggagcttctctcaccggaagatttagtgaatgcttgcaaaatgtttgaggcc
ctgaatctaccaatgagattacgtatctttgatagtggagtgatggtagttcagctacag
tcgcacagtgaggatgaaatgattgcttcagctgtggagacagtatcagaaaaaggtttt
gttagttctgaagagtatgctaaactcgtgggaatttccgtacttctggccaaagaaagg
ctgctactagcagagaaggttggccacctgtgtcgtgatgactctgtagaaagcttgcga
ttttacccaaatttgtttctgacgcaagactga
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