Chiloscyllium punctatum (brownbanded bambooshark): 140481283
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Entry
140481283 CDS
T11285
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03030
DNA replication
cpun03410
Base excision repair
cpun03420
Nucleotide excision repair
cpun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140481283 (rfc3)
03410 Base excision repair
140481283 (rfc3)
03420 Nucleotide excision repair
140481283 (rfc3)
03430 Mismatch repair
140481283 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpun03032
]
140481283 (rfc3)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140481283 (rfc3)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140481283 (rfc3)
DNA replication proteins [BR:
cpun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140481283 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
140481283 (rfc3)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140481283 (rfc3)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140481283 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
140481283 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_16
AAA_22
AAA_11
ATPgrasp_ST
DUF2247
CHB_HEX
ABC_tran
AAA_2
T4SS-DNA_transf
AAA_5
Motif
Other DBs
NCBI-GeneID:
140481283
NCBI-ProteinID:
XP_072433324
LinkDB
All DBs
Position
9:complement(34896007..34931035)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTALSKLDYHKEQASQLRNLVQCGDFPHLLVYGPSGSGKKTRIMCLLRELY
GAGIEKLRIEHQTITTPSKKKLEISTIASNYHLEVNASDAGTSDRVVIQELIKTIAQSQQ
LETSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCL
AVRVSAPSIEEICHVLSGVCKKEGLVLPQDLGKKIAEKSNRNLRKALLMCEACRVQQYPF
IADQDIPETDWEIYLQETANVIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGLLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKQFMEDGLEAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtgggtggacaaataccggccaacggctctcagcaaactggactaccataag
gagcaggccagtcagctccgtaacctggttcaatgtggtgatttccctcacttgcttgta
tatggaccttcaggctcagggaagaagactaggataatgtgtttacttcgggagctttat
ggtgcaggaatagagaagctaaggattgagcaccaaacaattacaacaccatccaaaaag
aagctggaaataagcacaatagcaagcaactatcatcttgaagttaatgcaagtgatgct
gggaccagtgaccgtgtagttattcaagaactgattaaaacaatagcacaatctcaacag
cttgagacaagtactcaaagagacttcaaagttgtattgctgacagaagttgatagatta
acaaaagacgcccagcatgccttgaggaggacaatggaaaagtacatgtcgacctgcaga
ttaattctgtgctgtaactcaacatcgaaagtcattgcacctattcgtagccgatgtctt
gcagtgcgagtctctgcgcccagcattgaggaaatttgtcatgtgttgagtggagtttgc
aagaaggaaggtcttgttcttcctcaagacctgggtaagaaaattgcagaaaaatccaat
cgcaacctgaggaaagcattgcttatgtgcgaagcctgcagggttcaacaatatccattt
atagcagatcaagatattcctgagacagattgggaaatatatctccaagaaactgctaat
gttattgtcagccagcaaacaccacaaagactgcttgaagtgcgtggacggttgtacgag
ctcctgacccactgcataccacctgaaataataatgaagggtctcttgacagagttatta
aacaattgtgacggtctgcttaagggggaggttgcacagatggctgcattttatgaacat
cgtctacagcttggcagcaaggccatctatcacctggaagcatttgtggccaagtttatg
gctatttacaagcaatttatggaagatggtctggaagctatgatgttctaa
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