Chiloscyllium punctatum (brownbanded bambooshark): 140481336
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Entry
140481336 CDS
T11285
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
140481336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140481336
Membrane trafficking [BR:
cpun04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
140481336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
140481336
NCBI-ProteinID:
XP_072433439
LinkDB
All DBs
Position
9:42448996..42686812
Genome browser
AA seq
1345 aa
AA seq
DB search
MWKGRGGFSDRSVSVPDLALQSSEVLTSLNIYVELKEGSEAEVGPLNDNIQLISRLDLSD
ICSNGDVKSLHNGCASANILSVDTTDSRMFENSSHPKVDNGFRDHSSNSGQEMGGSKLTP
SKIMHFISNPRKYTNCNSDSRPHSVILLGNSPTWNALSSFRKMSSFKKLKSSVFQGIQTR
GNAEVINVENFENVHKFVQNGHGVQMQNKPSCTATLQDLCSSGEDLASDVSETEDVDEAF
LRHTHRSRSIRRAYRVGRINLLDCDKSPIQEGCTKVVSLMPQASNINDSVVANGENHKTI
YRRSKSTDNLSFFKKSSFKRKSTSNLTEIKVTHENERLQRTASASSAEEKSGNTERRSKR
WRSPIRAKDFDRMLKLVSNVADVARRLESPSKENSSSCESRNGTRSNSRLHDDYSRRVSQ
SVDSERHGFASPNWNQPSAFPESPNLLTSTVTLTTVTQLEKSLSSPDFKTTRSSQCLNPA
VLKSNSQSTFCALSPSANEVFFDSNESKQTSQFTFKAEQSAIPVRPTAPKPQSPSIEKTK
HNITFNCPNQHSTLSLSSMDSDGRIEGTVSKAGKCSVSFKDLGQAVCFDDGNEDSGISSH
SQLSLNTTISGVEEKKEVSSEDQWRNQPPSTEDEKTDGLKVGQRRWNSWKSRQRQRPLSD
YGQFANTKFSIPENGLPIQSQKIDTAENEVTVVDSQPEKCVSIQLHRNPKRRPISVIGGA
SIYENNRSEEIVDLLTIQPVARPPLPSHQVPPYKAVSARLRPFTFSQSTPIGLDRVGRRR
HLRTSNLSADGSTESSALADDNGSEEDFAYEEICQANPRYLQPGGEQLAINELISDGHNV
YAEALWDHVTMDDQELGFKAGEVIRVLDASNKEWWWGMIEEKEAWFPASFVRLRVNQEDA
AAECTGKFADEQLNASCSKHLLKNAENQRQMRTNVIQEIMNTERVYIKHLKDICEGYIRQ
CRKHTGMFAEAQLSIIFGNIEDIYKFQRRFLKDLEKLFNKDEPHLSEIGSCFLQHQEGFG
IYSEYCNNHPSACVELANLMKQSKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQ
LAELLKYTNPDHSDYENIRAAYEAMKNVAHLINERKRRLESIDKIAQWQVSIVNWEGQDV
LTRSSELIHSGELMKISCQGKSQQRTFFLFDHQLFFCKKDLLRRDMLYYKGRINMDEVKV
LDIEDGKDKDFNVNVKNAFKLRNNAMEEVYLFCAKKPEDKQKWLQACIDERKRVEEDQEM
GFVIHENQKKQAMLNAKKSRHGKMKRVNYSGFSAPPPHQSLHPIHQRHITVPTSLPQQQV
FVLAEPKRKASPFWHSFTKLTPFKK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaggcagaggaggtttcagtgatcgctctgtcagtgttccagacttggcactc
cagtccagtgaagtgctaacctctctcaacatatatgtagagctgaaggaagggagtgaa
gctgaggtggggccactgaatgacaacatccagttgatcagtaggctcgatctttctgac
atctgtagtaatggcgacgtgaaatctctccataatggatgcgcaagtgccaatatctta
tctgtagacactacggattccagaatgtttgagaattcatctcatccgaaagtagataat
ggctttcgtgaccatagtagcaacagtggtcaggaaatgggagggagtaagttgacccct
tcaaaaatcatgcatttcatttcaaatcctaggaagtatacgaattgtaactctgacagt
cgaccacattctgtgatattgctgggaaattctcccacttggaatgccttgtcatctttc
agaaaaatgagttctttcaaaaaacttaagtcctcagtttttcaaggaattcaaaccaga
ggaaatgctgaagtcataaatgtggaaaatttcgaaaatgtgcacaaatttgtgcaaaac
ggccatggtgtgcaaatgcagaataaaccttcttgcacagccacgttgcaagatttgtgt
agttccggggaggatttggcttcagatgtttccgaaaccgaagatgttgatgaagctttt
ttgcgccatacccacagatcacggagcattagacgtgcttatagggttgggcggataaat
ttattagactgtgataaatccccaatacaagagggctgtaccaaagtcgtgtctcttatg
ccccaagcatccaacattaatgattcagtggtagcaaatggtgaaaatcacaaaactatc
tataggagaagcaaaagcacagacaatttaagctttttcaagaaaagttcatttaaaagg
aaatcaacctctaacctcacagagataaaagtgacccatgaaaatgaaagattacaacgc
acagcaagtgcttcatcagcagaagaaaaatctggcaacactgaaaggcgatcaaaacgc
tggaggagcccaatcagagctaaagattttgacagaatgctaaagttagtgagtaatgtt
gcagatgtagcaaggagactggagagtccatcaaaggaaaactcatcttcatgtgaaagt
agaaatgggactcgctctaatagcaggcttcatgatgattattctcgaagagtttctcag
agtgttgacagtgaaagacatggatttgcctcccctaactggaaccaaccctctgccttt
cctgaatcccccaacttactcacttccacagtcaccctgactactgttacacagttggaa
aagtcattatcctcaccagactttaaaaccaccaggtcttcccaatgtttaaacccggct
gtgctaaaatcaaatagtcaatctactttctgtgctcttagcccttctgccaatgaagta
ttctttgattcaaatgagtccaaacagaccagtcagtttacgtttaaagctgagcagtct
gctattccagtcagaccaactgctcctaaacctcagagtccgagcattgaaaagactaaa
cacaatattacattcaactgtccaaatcaacatagtactttatcacttagttctatggac
agtgatgggcgaattgaaggaactgtctcaaaagctggaaaatgttcagtatcatttaag
gatctgggacaagcagtttgctttgatgatggtaatgaagatagtggaataagcagtcat
tcacagcttagtctgaatacaaccatttctggagtggaagaaaaaaaggaggtttcttct
gaagatcaatggaggaaccaacccccttccacagaagacgaaaagacagatggactaaag
gttgggcaaagaaggtggaactcctggaaaagcaggcaacgacaacgacctctttcagat
tatggtcaattcgctaacacaaagttttctatcccagagaacggtttgcctattcagtct
caaaaaattgacactgcagaaaatgaagtcacagttgttgactcccaaccagagaaatgt
gtcagtattcagctccacagaaatccgaaaaggaggccgatctctgtaattggtggtgcc
agtatctatgagaataatcgttcagaggaaatagtggatcttcttacaatacaaccagtt
gctcgaccaccccttccctcacatcaggtaccaccatacaaagctgtctctgccagactt
cgacctttcactttctcccaaagcacacccattggcttagatcgggttgggcgtaggcgg
cacttgagaacatcaaatctttcggcagatggaagcacagagtcttctgcacttgctgat
gacaatggcagtgaagaagattttgcatatgaggaaatatgccaggcaaatcccagatac
cttcaacctggtggagaacagcttgctataaatgagttgataagcgatggccacaatgtc
tatgcagaagcgttatgggatcatgttacaatggatgatcaagaacttggatttaaagct
ggagaagtcatcagagtccttgatgcctccaacaaggaatggtggtggggcatgattgaa
gaaaaagaagcctggtttcctgctagctttgttcgactgcgagtgaaccaagaagatgct
gcagctgaatgcactggaaagtttgcggatgaacaactgaatgccagctgcagtaaacac
ctactcaaaaatgcagagaatcagaggcagatgcgaacaaatgttatccaagagatcatg
aacacagaacgagtctacatcaagcatctgaaagacatctgtgagggatatattcgtcag
tgtcgcaaacatacagggatgtttgctgaagcgcagttaagtatcatatttgggaacatt
gaagatatttataaattccaaaggagatttttgaaggacttggagaagctattcaacaaa
gatgaacctcacctgagtgaaataggatcctgtttccttcagcaccaagaaggatttgga
atatactcagaatattgcaacaatcatcccagtgcatgtgttgaacttgccaacctaatg
aaacaaagcaaatatcgacacttttttgaggcctgtcgactgcttcaacagatgattgat
attgccattgatggctttcttcttacaccagtccagaagatctgtaaatatccactacag
cttgctgagttgctcaaatacactaaccctgatcacagtgattatgaaaacatcagagct
gcatatgaagcaatgaagaatgtagcacatctgattaatgaacgtaaaagacgattagaa
agtatagacaagattgctcaatggcaagtgtccattgtaaactgggagggacaagatgtt
ttaactagaagttcagaattgattcattctggcgagttaatgaaaatctcatgtcaagga
aagagccaacaaagaacattttttctgtttgaccatcagttatttttctgtaaaaaggac
ttgttgagacgagatatgttgtactacaaaggacgtattaacatggatgaggtaaaagta
ctggacatagaggatggtaaagacaaggattttaatgttaatgtgaaaaatgccttcaaa
ctgagaaataacgcaatggaggaagtctacctattctgtgccaaaaagccagaagacaaa
cagaaatggctccaagcatgtatagacgaaagaaaaagggtggaagaagaccaagaaatg
ggatttgtaatacatgaaaatcagaagaaacaagcaatgttaaatgccaaaaaatccagg
catgggaaaatgaagagggtgaattatagtggattttctgctcctcctccacatcaatct
ctgcatccaatccaccagcgacatataactgtgcctaccagccttcctcagcaacaagtg
ttcgtattggccgagcccaaacgtaaagcttcccccttctggcacagctttaccaagttg
actccatttaagaaatga
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