Chiloscyllium punctatum (brownbanded bambooshark): 140481559
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Entry
140481559 CDS
T11285
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
140481559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140481559
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140481559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
140481559
NCBI-ProteinID:
XP_072434057
LinkDB
All DBs
Position
9:complement(99103780..99338283)
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AA seq
1395 aa
AA seq
DB search
MEWKQQADPDHVLAFRDAQRWVEEVTGKSFGNKDFRSALEDGALLCELVNKIKPGVSKKI
NRLSTPIAGLDNINVFLKGCQKLGLKEAQLFHPGDLQDLSSRVTVKREENQRRLKNVLIT
IYWLGRRAQHEPHYNGPYLNLKAFEGLLGQTLTKALVDSGSLKRSGRDSGYCDIWCTERN
ESILPQLRHRRDDSLDSLDSFGSKSVTSLSSDITLKGSSEGGGSDIESDYLNSKTMDEVK
NDMSLRRTSTSDYKPVVPYNQFLPKKSKPATYIPAPLMKKRAERHEENRRSWANPMFEKN
DGTFSRLLQRSADSDLGSKSLNDVSEDSTGIPKSLRYEELQRIKATLNDQDQQWQSDLAK
WKNRRKSYTSDLQRKKDEREEIEKITSGENAKPTKTFRQIRKERELRQEGSYAGDQSDYR
KLNSSDEEVFAEEAKPPRRFYERSSTVATETPFTSQRHEVVSSAPPPQVSKSTTASELKS
TVNSLSGKQSSAALYTRHAMDPKTEQTKVSNSLPRNYQAPDVSRIAPVIVPRPYGTQSKR
VSSLSRSYQLQDESLKYNGDVNGSKMSQGTPSFFSKPEAQESKNSRGVLPREEEGTTWVN
SSLKMEEKRSVLVNLSSKPENDVHAKSNRLSKQDDDDQSQASPVMSSNEEEAEDEEEEEE
EEEVEERPASLSRSNFPQESKPDTTTGPVTMNSFTKTSSLATAPVTTAATQQGQYSNTRI
VINQRPNSGRDFGFTTIPSSTGITVESVERGGPAEFCQLQEGDEIISISGNDVAGMSHQT
WQEAMEDANKSGNLNLEIRRYEKSYSEHTNFNDPTRWEDAGLASVTNRTQFLNQSTEVDK
SKRDQENLLEDAKPKASEPLSLRNFKRRSQFFEQGGSESAVSDLQIPSISVSSRWSWNPE
EERKRQEVWQKEQDRLLQEKYQREQEKLQEEWRKAQKEAEQEGSKYYEEERRILQETNTP
QSPSNTVDGPVGFKNQFTSRNWMTSWNNQESEDESQELGEEEDWHGSEDDEARQREEFQL
QEERRRQEEEAADRLEQERKLQEREHERQEQWHREKEQLEEKRQRQRQQAEERARLAESE
RTEEYQPQWAKSKSTSDLDEFVPAHGHSVDVKPVGGVAQWLLEEEKLRRRHGKTQEAARV
ELETERLKILNQMKYADPERGDIKHKVADNSWIKSEMKPKSSQQQDPPLSYAEQERQKIL
QEMRRKTQLLNDNSWIRQRSASVANKTASSNYGLMRRGESLDNLDAPKTNNWGINAEPAH
SSGKGPGYYPISTSNRSYMRTASSTLPPQSTGSLRTASWTKNPSVAPTSQSQILQSNRSI
SGKKICSYCDKPLGRGAAMIIESLGLCYHLQCFKCILCSIDLGGTESGAEVRVRNNKLYC
NACYIQYKTGQSVPI
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaaacagcaggcggatcctgaccacgtcttggcattcagagacgctcagcga
tgggtagaggaggttactgggaagagttttggcaacaaagattttcggtcagcactggaa
gatggagccttattatgcgaactagttaacaagataaaaccaggtgtcagtaaaaagatc
aaccgcctgtccacaccaatagctggtctggacaacattaatgttttcttgaaaggctgt
caaaaacttggtttaaaagaagcccagctgtttcacccaggagatctacaggatttatcc
agtcgcgtcactgtcaaacgtgaagaaaatcagaggaggctaaaaaatgttctgatcaca
atatattggctgggtagaagagcacagcatgagcctcattataatggaccttaccttaac
ctgaaagcatttgaagggctgcttggacaaactctgacaaaggctcttgtggactctggc
agtctgaaacgcagtggacgagacagtggatactgtgatatctggtgtacggaaagaaac
gagtcaatattaccacagctccggcatagaagagacgattcacttgatagcttagactca
tttgggtcaaagtctgtcaccagcctttcatcagacataacactaaaaggcagtagtgag
ggtggtgggagtgacattgagtcagactatctaaacagcaagacaatggatgaagtgaag
aacgatatgtcacttcgcaggacctccacttcagactataagcctgtagtgccgtacaac
caattcctgccaaagaaaagcaaacctgcaacttacattccagctccactgatgaaaaag
cgagcggaaagacatgaagaaaatagaagaagttgggcaaacccaatgtttgaaaaaaat
gatggaacattttcaagacttctccaaaggtcagctgatagtgatttagggagtaaatca
ctcaatgacgtgtctgaagattccactggaattcctaaatcactgcgatatgaagagtta
cagagaataaaggctactctgaatgaccaagaccagcaatggcagagtgacttggcaaaa
tggaaaaaccgacgcaaaagttatacctcggacttgcagaggaagaaggacgaaagagaa
gaaattgagaaaataacaagtggagagaatgctaaacccacaaagacattcagacaaatt
aggaaagaaagggagctcagacaggagggatcatacgccggtgaccaaagtgattacaga
aagctcaattcctctgacgaagaagtgtttgctgaagaagccaaacccccaagacgtttt
tacgagagaagctccacagtggcgactgaaacccctttcacttcccagaggcatgaggtg
gtttcctcagcacctccacctcaagtctcaaagagcacgacagcgtctgaattgaaaagc
acagtcaacagtctgtcaggaaagcaaagttctgctgctttgtatacccgccatgcaatg
gatcccaaaactgaacaaaccaaggtttcaaattctttgcccaggaattaccaagcacct
gatgtatccaggattgcacctgtcatcgtgccaagaccctatggtacacaatcgaaaaga
gtctcctccctctctagatcttatcagttgcaagatgagtcgcttaaatacaacggagat
gtgaatggttcaaaaatgtcccagggcacaccaagtttcttttccaagcctgaagcgcag
gaatccaagaacagtcgtggggtcttgccaagggaagaagagggaacgacgtgggtcaac
agttccttgaaaatggaggaaaagagatccgtgctggtcaatctttcttcaaaaccagaa
aatgatgtgcatgcaaagagcaaccgtttatcaaaacaagatgatgatgaccaatcacag
gccagtcctgtaatgagtagtaatgaggaagaggcagaggacgaggaggaggaggaggag
gaggaggaggtggaggaaaggccagcatctcttagtaggagtaactttcctcaagagtca
aagcctgacactactactggcccagtaacaatgaattcttttacaaaaacaagcagcttg
gccacagccccggttaccacagcagccacgcaacagggacagtacagtaacacacgaata
gttattaatcagaggccgaacagcggtcgcgactttggatttacaaccattccgagctct
acgggtataactgtcgagtcagttgaacgaggaggaccagcagaattttgccaactgcaa
gagggcgatgaaatcatttccatcagtggtaatgatgtagctggtatgagccaccagact
tggcaggaagccatggaggatgcaaacaagagtggaaatctgaacctggaaatcagaaga
tatgagaaaagttattcagaacatactaacttcaatgatcctaccagatgggaagatgct
ggactggcctctgtgaccaataggacccaattcttgaatcaatcaacggaggttgataaa
tctaaaagggaccaggaaaatttgctggaggatgcaaagccaaaagcatctgagcccctt
agcctgagaaactttaaaagacgatcccaattttttgaacaaggcggatccgaatctgca
gtgagtgatctacaaattccatcaattagtgtttcaagtcgatggtcttggaatcctgag
gaagagagaaagcgccaggaagtatggcagaaagagcaggaccgtttgttacaggaaaaa
taccagcgtgagcaggagaaactacaggaagagtggagaaaggctcagaaagaagctgaa
caagaaggttccaagtactatgaagaggagcgcaggatattgcaggaaacaaacactcca
caatcgccttcaaatactgtggatgggcctgtagggttcaagaaccagttcacttctcga
aactggatgacatcttggaataaccaagagtcggaggatgaatcgcaggaactgggagag
gaagaagattggcacggaagtgaagatgatgaggcaaggcagcgagaggaattccagttg
caagaagaaagaaggcgtcaagaagaagaagcagcagatcgccttgaacaggagagaaag
ctgcaagagagagagcatgaacgacaagaacaatggcatcgtgagaaagagcaacttgaa
gagaagagacagagacaacgccaacaagccgaagaaagggcacggttagcagaaagtgaa
agaacagaggaatatcagccccagtgggccaagtccaagtctacctctgacctcgatgag
tttgtgcctgcccatggacacagtgtagatgtgaaaccagtgggtggtgtggcccagtgg
ctgcttgaggaagaaaagctacgcaggcgacatgggaagacgcaggaagctgcacgtgtt
gaattggaaacagagaggctgaaaatccttaatcagatgaaatatgctgacccagagaga
ggtgacataaagcacaaagtcgcagacaactcatggattaagagtgaaatgaaaccaaaa
tcttcacagcagcaagacccaccactctcgtatgctgagcaagagcgacagaaaatccta
caggagatgcgcagaaagacccagctcctgaatgataatagctggatcagacagcgtagt
gccagtgttgccaataagactgcatctagcaattatggattaatgagaaggggtgaatct
ttagacaacttagatgctccaaagacaaacaactggggaataaatgcagagccagcacat
tcctcgggaaagggacctggttattacccaatctccacctcaaaccgctcttatatgcgc
actgcatcatcaaccttaccgcctcaatccactggatcattgagaacagcatcatggacc
aagaatccttctgttgcaccaaccagtcagtcccagatactgcaaagcaataggtcaata
agtggaaagaagatctgttcatactgtgataaacccctgggcagaggagctgccatgatc
atcgagtctcttggtctttgttatcacttacaatgttttaagtgcatcttgtgcagcatt
gaccttggaggtacagaatctggagcagaggtccgagtacggaataacaaactctattgt
aacgcctgctacatccagtacaaaactggacagtccgtgcctatttga
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