Chiloscyllium punctatum (brownbanded bambooshark): 140481574
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Entry
140481574 CDS
T11285
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140481574
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpun01009
]
140481574
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140481574
Protein phosphatases and associated proteins [BR:
cpun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140481574
Cell adhesion molecules [BR:
cpun04515
]
Cadherins
Protocadherins
140481574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Myb_DNA-bind_5
DUF7420
Baculo_11_kDa
DUF6377
MAP17
EphA2_TM
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
140481574
NCBI-ProteinID:
XP_072434093
LinkDB
All DBs
Position
9:104933973..105647721
Genome browser
AA seq
1497 aa
AA seq
DB search
MMELRDFYLLFALFACLTVDSALAQELVYTIQEELPENILIGSIPRDLNISAGGGADLIY
RLVSKAGEVPLLRVSSGTGDIYTGSQRVDREKLCPGGGGGGEGEPGECSFEIEVVILPND
HFRLVKVKLVVRDVNDNAPMFPSPVINISIPENTLPNSRFPVPSASDPDAGANGVQRYQL
LDGQSVLGLDVVESPEGEKWPQLVVQRGLDREQKDTYVMKIKVEDGGVPAKSSTAILQVT
VSDVNDNRPVFRESQLEVQLPEDSPPGTSVIQLHATDADVGSNAELRYLFSAQTPAAVRR
SFALDPSLGLITVQRPLDREDVSLHKMTVLATDGSSSPARATVTVNVTDVNDNPPAIDIR
YIISPVNGTVHLSEKDPVNTKIALITVSDRDTDVNGKVVCYIEKEVPFHLKAVYDNQYLL
ETSSFLDYEGTNQYAFRIVASDAGKPSLNQSALVRVRLEDENDNPPVFSQPVIELAVPEN
NHRGLYLTTISATDDDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERYIFT
VTARDSGNPPLQSQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDLDA
GANAEVMASVVGDNANFILDPLSGVIRSNVSFDREQQSSYTFEVKAVDRGRPVRTSIAKV
TINVIDVNDNSPVVIYPPSNSSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYSIVSGN
NKGLFRIDPVTGNITLEEKPTAVDQGLHRLVVNISDLGYPKPLHTLVLVYLYVNDTVNNA
SYVYELIRRTMETPLDKNIGDGTQPWQNEDYLTIMIAIVAGAMVVIVVIFVTILVRCRQS
SRFKATQRNKQGAEWMSPNQECKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDPAHEPIN
GTITLPAELEEQTIGRFDWGSTPPTTFKPNSPDLARHYKSGSPQPSFHLKPDTPISAKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSHRRVTFHL
PDGSQESCSDSGLGDHEPVSGGTLISHPLPLVQPQDEFYEQASPDKRTEADGNSDPNSMY
TSSSSNNMSRISTGGKQTKMVSTVAKLQKVKFSTLAMQMLVKHFTRLQRIFLATNPKMHT
SEGHRRGWDVIVVKVNKISKVTRTAEDCQKRINDLRLGARQKVAFNKKRGTVQHRDVAKQ
KVLTWEEEKVAPIVHLVEHGPDASSDSSDSGDCCTSKPLRSEQQQTTVIMEDEKMPIQHQ
EPRVAMEGAVTDKVQQGSYGEQKEDCTGGQWKAAAYMKVPPSEKSEQRGTCQPDATGAVN
SSFPSHTQSAHGEELCPICRRLDTLVSTVQRGFNHIHRDINTLQNASQYRGARLSQNVMS
LIGAMHTLVRLHHFSTLPRRDVAIQTSILTGRHLGENVGAASSDTTTVSSDNVTTLNNTP
PTSSDTVVASNETGVASSDTGVRSNDTVIEVSVDPDGDSAESMSIEESSQNSSDSDW
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctgcgggatttctacctgctgttcgccctgttcgcctgcctgacggtggac
tctgccttggctcaggagctggtctacaccatccaggaggagctgccggagaacattctg
atcggcagcatcccgcgggacctgaacatctcggcgggtggaggagcggacctcatctac
cgcctggtgtccaaggcgggcgaggtgcctctgctgcgggtctccagcggcaccggggac
atctacacgggctcgcagcgggtggaccgggagaagctgtgcccgggaggaggaggagga
ggcgagggtgagccgggcgagtgctcctttgagatcgaggtggtgatcctgcccaacgac
cacttcaggttggtcaaggtgaagctggtggtgcgcgacgtgaacgacaacgcgcccatg
ttcccctcgccggtgatcaacatctccatcccggagaacacgctgcccaacagccgcttc
ccggtgccgtccgccagcgacccggacgccggcgccaacggggtgcagcgctaccagctg
ctcgacgggcagagcgtcctcggcctggacgtggtggagagccccgagggcgagaagtgg
ccgcagctggtggtgcagcggggcttggaccgggagcagaaggacacctacgtgatgaag
atcaaagtggaggacggcggggtgcctgccaagtccagcaccgccatcctgcaggtgacc
gtcagcgatgtcaatgacaaccgcccggtgttccgggagagccagctggaggtgcagttg
cccgaggactcgccgccgggcacctcggtcatccagctgcacgccaccgacgcggacgtg
ggctccaacgccgagctgcggtacctgttcagcgcgcagaccccggcggcggtgcggcgc
tccttcgcgctggacccgagcctggggctcatcaccgtgcagcgcccgctcgaccgggag
gacgtctcgctgcacaagatgaccgtgctggccaccgacggcagctccagccccgcccgc
gccaccgtcaccgtcaatgtcaccgatgtcaacgataacccgcccgccatcgacatccgc
tacatcatcagcccggtgaacggcaccgtgcacctctccgagaaggacccggtcaacacc
aagatcgccctcatcaccgtctccgacagggacaccgacgtcaacggcaaggtggtctgc
tacatcgagaaggaagtccccttccacctcaaggcagtctacgacaaccagtacctgctg
gagacctcctccttcctggactacgagggcaccaaccagtatgccttcaggatcgtggca
tcggacgcgggcaagcccagccttaatcagagcgccctggtccgggtgaggctggaggac
gagaacgacaacccgccggtcttcagccagcccgtcatcgagctggccgtgcccgagaac
aaccaccgcggcctctacctgaccaccatcagcgccacagacgacgacagcggcaagaac
gccgagatcgtctaccagctggggcccaacgcctccttcttcgacctggaccgcaagacg
ggcgtcctgaccgcctcacgggtcttcgaccgggaggagcaggagcgttacattttcacg
gtgaccgccagggacagcggcaaccccccgctgcagagccaagctgccgtgatcgtcacg
gtgctggacgagaacgacaataaccccaagttcacccataaccacttccagttctttgtg
tctgagaacttaccaaagtacagcactgtgggagtgattactgtcaccgatctggatgca
ggggccaatgcagaggtgatggcttctgtcgtcggagacaatgcgaatttcattctagac
ccactgagtggtgtgataaggtctaacgtctcttttgacagagaacagcaaagctcctac
acttttgaagttaaagctgtagacagggggagaccagtccgcacttccattgctaaagtc
acaatcaatgtcatcgatgtcaatgataacagtcccgttgtaatctatccaccttctaac
tcttcattcaaactagtacccctgtctgctatacctggttccgtggtggcagaagtattt
gctgtggatgttgatacaggtatgaatgctgagctcaaatacagcattgttagcggaaat
aacaagggtttgtttcgaattgaccctgtgactggtaatatcaccttggaggagaaacca
actgctgtcgaccagggcttgcaccgtctggttgtgaacatcagcgatctaggttatccg
aaacccttgcacacccttgtgcttgtctacttgtatgtaaatgacactgtaaacaatgct
agttacgtctatgagttaatacggaggacaatggagactccactagataagaacattgga
gatggcacccagccctggcaaaatgaggattaccttaccataatgatcgccatagtggcg
ggagccatggtggtgattgtggtcatctttgttacaatattggtgcggtgccggcagtcc
tcaaggttcaaggcaacacaaaggaacaaacagggtgctgaatggatgtctcctaatcag
gagtgtaagcagaacaaaaagaagaaaaggaagaaaagaaaatctccgaagagttctctt
ctaaactttgtcaccatcgaggaatccaaacctgatgatcctgcccatgagcccatcaat
ggaaccattacccttccagctgagctggaagagcagacgataggacggtttgactggggc
agcacaccaccaactacatttaagcccaacagcccagacctagcaaggcattacaaatct
ggctctccgcagccctcttttcacctgaagccagacacccctatttctgcgaaaaagcat
cacgtgattcaggagctccctttggacaacaccttcgttgggggttgtgacaccctgtcg
aagcgctcttccactagttcagaccacttcagtgcctcagagtgtagctcccaaggaggc
ttcaagacaaagggcccattgcacaccagacagtctcaccgccgcgttacatttcatctg
cccgacggctcccaggaaagctgcagtgatagtggtttaggagaccatgaaccagtaagt
ggtggcacgctgatctcacaccctctccctctggttcagccgcaggacgagttctacgag
caggcttccccagacaagaggaccgaggccgacggcaactctgacccaaattctatgtac
acgtcttcatcatctaataacatgtccagaatctctacaggcggaaagcagacgaaaatg
gtgtccacagtagctaaactgcagaaggttaaattctccacgttggctatgcaaatgctt
gtgaaacatttcacaaggttacaaagaatattcctggccacgaatcccaaaatgcacact
agtgagggtcaccgacgtggctgggacgtcattgttgtaaaagtcaacaaaatttccaaa
gtaacacgaacagccgaggactgtcaaaagcgcatcaatgacttaagacttggtgctcga
caaaaagtcgcttttaacaaaaagagagggacagtccagcacagagatgtggcaaaacag
aaagtcctaacatgggaggaagaaaaagtggccccgatagtccaccttgtggaacatgga
cctgatgcgtcctctgactcaagtgattctggtgattgttgcacctcaaaacccttgaga
tcagagcaacaacaaaccactgtgatcatggaggacgagaagatgccaatccagcatcag
gagcctagagtagccatggaaggtgcagtgactgacaaggtacaacaaggttcatatggg
gaacagaaagaagactgtacaggtgggcaatggaaagcagcagcttacatgaaagtgcca
ccctcagagaaatcagagcaaagagggacatgtcagccagacgcaacaggtgctgtgaat
tcctctttcccatcacacactcaaagtgcacatggtgaggagctttgtcccatatgtcgt
aggttagatacacttgtgagcactgtgcaacgtgggttcaaccacatacatagggacata
aacacactacaaaatgcctctcagtaccgtggagcccgtttgtcccagaatgtcatgtct
ctgattggtgcaatgcacactcttgtgagactccatcatttttccacattgccacgcaga
gatgtggctattcagacctccatcctgactggaaggcatctgggggaaaatgttggagct
gcatctagtgacacaacaactgtatcaagtgataatgtaactaccctcaataacacccca
cctacatccagtgacactgtagtggcatccaatgaaactggagttgcatccagtgacact
ggggttaggtcaaatgacacagtgatcgaagtgtcagttgatcctgatggggactctgca
gagagtatgtccattgaggagtcctctcaaaattcttcagacagtgattggtaa
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