Chiloscyllium punctatum (brownbanded bambooshark): 140481651
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Entry
140481651 CDS
T11285
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140481651
Cell adhesion molecules [BR:
cpun04515
]
Cadherins
Protocadherins
140481651
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
140481651
NCBI-ProteinID:
XP_072434280
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Position
9:122122225..122129741
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AA seq
1057 aa
AA seq
DB search
MSPGRSRSRVAVPVCSPSREPCFLLLVLLLAPILSECKTVRYSTYEEQEAGTVIGNLAAD
LQLEAAGGGQSGFRLMPECNGSVPVTVRVSVRERDGELTVASRIDREQLCGQQEPCLLLL
DVVSFSRDRFLLIHVEIQVLDINDHWPEFPQAEIELEISESSAPGTRLPLPAALDADTGS
HSVRGYELSVNGHLELELPPGAGPGAGDQPLPLLLLVKPLDRESQAELKLQLRARDGGDP
PRSGDARLTVRVLDDNDNAPAFESGSLELELPEDTAPGSVLLQLEARDPDQGVNGELRYT
FSPRLEAAARRLFRLEPRSGRLSLHAPLDHEARDRFELEVEARDMGARPRASSCRVTVRV
LDVNDNAPEIRVSALWPGGAGAGTADQAAAAAAAAASGLASITEAAEPGSFVALVSVWDR
DSGANGRLSVSLLGPRQLELRPAYGINHHMIVTAERLDRERNTDYNVTLVAEDQGPEPRR
TVRPFTVTVTDVNDNAPAFPRSVYRLSLAENNPPGAQLGTVRARDPDLGVNGRLTYRLLQ
QREPGPGREPEPGPGLQPPAVAVEPHSGSLFALRPLDREELPELELLLQATDGGSPPLSG
STTVRLVITDRNDNAPLITHPPAPGPGPGPAPAPAPPGNRSASAKMALPGGAPRGYLAAR
VRAQDPDEGPNGRLSYRIVSGDPPGLFTIRSDTGEVYLGRPLPPSAPPGAGPGAEPGALR
LVVAVSDGGLPSLSSTVTLSFTVGPEPPPPPPPAAPAASPGPGQRSWDTSFTVIAVLAAG
CVALLLAIVGIASSCGTGGKPGREGDLSGPRADAACSPAPGELEADGASEEAAKGVCLLE
TQRQPTANTQESFMPEPGVNHGAFCTVAFHQGIQTIAYPGQDVFSGKDSGKGDSDFNDSD
SDLSGDGSRKGHTIIDQKQNDVFPCHKSQTPCSSNPYYNLTSQTTECGKSSSHSKPSQMV
AYSSMSTTLLHSSSGEVTSGLQDQSLKYTRQYGRVTRLESQTSESVLSRESGRTGSSFHP
PVIQRPIKATSSAYNASGHRYQTSYLNTAHSEVATSF
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgggagaagtagaagcagggttgcagtcccggtgtgcagtccctccagggag
ccctgcttcctgctccttgtgctccttctcgctccgatcctgagtgagtgtaagacggtc
agatattccacgtacgaggagcaagaggccggcacggtgatcgggaacctggccgccgat
ctgcagctggaggcggccggcgggggtcagagcggcttccgcctgatgcccgagtgtaac
ggctcggtaccggtcacggtcagggtcagtgtgagggagagggacggcgagctgacggtg
gcgagccgcattgaccgggagcagctttgcggtcagcaggaaccgtgcctgctgctcctg
gatgtggtcagcttctcccgggacaggttcctgctgatccacgtggagatccaagtgctg
gacattaatgaccattggcctgagttcccccaggccgagatcgagctggaaatctccgag
agctcagccccgggcacacggctccctctgcccgccgctctggacgccgacaccggctcg
cactcggtgcggggctacgagctctcggtgaacggtcacctggagctggagctgccgccc
ggggccgggcccggggccggggaccagccgctcccgctgctgctcttggtgaagcccctg
gaccgggagagtcaggccgagctgaagctgcagctccgagcccgggacgggggcgatccg
cctcggagcggggacgcgcggctgaccgtgcgcgtcctcgacgacaacgataacgctccg
gccttcgagagcggctccttggagctggagctgccggaggacacggccccgggctcggtg
ctgctgcaactcgaggcccgggacccggaccaaggcgtgaacggcgagctccggtacacc
ttcagcccgaggctcgaggccgccgctcgccgcctcttccgcctggagccgcgctccggc
cgcctcagcctgcacgcgccgctcgaccacgaggcgcgcgaccgcttcgagctggaggtg
gaggcgcgcgacatgggcgccaggccgcgcgcctcgagctgccgggtgacggtgcgcgtg
ctggacgtcaacgacaacgcgccggagatccgcgtgagcgcgctgtggcccgggggcgcg
ggcgcgggcacggcggaccaggcggcggcggcggcggcggcggcggcctcgggcctcgcg
tccatcaccgaggcggcggagccgggtagtttcgtggcgctggtgagtgtgtgggaccgg
gactccggagctaacggccgcctctcggtgtcactgctcgggccccggcagctcgagctg
aggccggcctacggtatcaaccaccacatgatcgtgacggcggagcggctcgaccgggaa
cggaacaccgactataacgtgacactggtggccgaggaccagggcccggagccccgccgc
accgtgcggcccttcaccgtcaccgtcaccgatgtgaacgacaacgcgcccgccttcccc
cgctccgtctaccgcctgtcgctggcggagaacaacccgcccggggcccagctcgggacc
gtccgggcccgtgaccctgacctgggcgttaacggccgcctgacctaccgcctgctgcag
cagcgggagccggggcctgggcgggagccggagccggggcctggcctgcagcctcctgcc
gtcgctgtggagcctcacagcggctccttgttcgcgctccggcccttggaccgtgaggag
ctgcccgagctcgagctgctgctgcaggcgacagacggcggttccccgccgctcagcggc
tccaccaccgtccgcctggtcatcaccgaccggaacgacaacgcgccgctgatcactcac
cccccggccccgggcccgggcccgggcccggctccggctccggctcctcccgggaaccgc
tccgcctccgccaagatggcgctgcccgggggcgcgccccgcggttacctggcggcgcgc
gtgcgggcccaggacccggacgaggggccgaacggccgcctgagttaccggatcgtgagc
ggggatccgcccgggctgttcaccatccgctcggacaccggggaggtgtacctgggccgc
ccgctgccgccctccgcgccccccggggccgggcccggggccgagcccggggccctccgc
ctggtcgtggcggtcagtgacggcggcctgccctccctgtcctccaccgtcaccctgagc
ttcacggtggggcccgagcctcctcctcctcctccccctgcagctccggccgcctccccg
ggcccgggacagcggagctgggacacctccttcaccgtgatcgcggtgctggccgccggc
tgcgtggccttgctgctggccatcgtcgggatcgcctcgagctgcggcaccggcggaaag
cccggccgggagggagacctctcggggccgcgggcggacgctgcctgttccccggccccg
ggcgaattggaagcggatggagcttcggaagaggcggcgaagggcgtgtgtctcctggaa
acacagcgtcaacccactgccaacactcaggagagctttatgccagagcctggtgtcaat
catggagccttttgtacagttgcctttcatcaaggtatccagaccattgcatatcctgga
caagatgtattcagtggaaaagacagtgggaaaggagatagtgacttcaatgatagtgat
tctgacttgagtggtgatggatcgagaaaaggacatacaataatcgatcaaaagcaaaat
gatgtgttcccctgtcataaaagccaaacgccttgcagttctaacccgtattacaacttg
acgtctcaaacaacagaatgtggcaaatcctcttcacactcaaaaccgagccaaatggtt
gcttattcttcaatgtctacaacattactgcattcatctagtggtgaagtcacttcgggt
ttgcaggatcagtccttaaagtatactcggcaatatggccgcgtaaccaggttggaatct
caaacttctgaaagtgttttgtccagagagtctggaaggacaggatcctcatttcaccca
cctgtgatacagagacccattaaagcaacttcatcggcatataacgcttctggacataga
taccaaaccagctatcttaacactgcccactctgaagtggctacgtcgttttga
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