Chiloscyllium punctatum (brownbanded bambooshark): 140481928
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Entry
140481928 CDS
T11285
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140481928 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140481928 (bard1)
04121 Ubiquitin system [BR:
cpun04121
]
140481928 (bard1)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140481928 (bard1)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140481928 (bard1)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
140481928 (bard1)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
140481928 (bard1)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140481928 (bard1)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
140481928 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
zf-RING_6
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_10
RTT107_BRCT_5
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
140481928
NCBI-ProteinID:
XP_072434715
LinkDB
All DBs
Position
10:17597962..17772995
Genome browser
AA seq
789 aa
AA seq
DB search
MSGPHRAQSWAHTAGALAALERLLQCSACCKLLQEPVCLGGCEHVFCRVCVADSLGTNCP
VCHTPTWVKDLQPNRQLHNIADLCSQLRVLLNVRDSPGAKCKPTGSVIGPEEVTGKKWQM
RTWFSPRSKKMRCVLDMNASRKSQKVASSSGFNGSSSSVFEFMSSPSPPLNSPKKKAPIN
SKQRVRKRLADANKGWGFGKRRSKKMERGNDSPENIDYHRAVSFCSQPVVLSSQGQTVAG
ETAEESLAVPQDDNVIDSSAESLTKNVIESSSEACCTPTVSSCKDISLGQTFNQEGDTFS
LVPIPAPHTNAKRLRKSSDSCNLTLAKKSRKEVQNSCFEKSSAIVCEQAKLDTQQEFSAT
PARQTELSGSINQTQAPSSTEKNCGTPSSRYNTQGKQCATPKSPQTPQATVRSQLPGSCA
MTPISPLTPTMKRNHKGETPLHIAAIKGDIAAVEQLLENGANPNIKDNAGWTPLHEACNH
GHLEIVERLLKFGVLLNTPGYQNDSPLHDAVRNGHVDVVKLLILHRASQNVINIFGLRPV
DYANSEEMIAALHHSPKNEDPVAEHCFAVTSNQRRDGPIVLLGSDLLGAKKKKLDKLVKL
LKAGNCTEFNTLVTHIIVPNDQALSTMKCLMGIISGCWLVNFEWVTACLEKNDRVAEDDY
EINIVNGPERGRQNQEQQLPKLFDGCHFYFMGPFKSCKKEDLVNLVKVGGGQVLARQPKP
DSDVTQSINTVAYHASPGSDQSFCTQYIISDKDSNYKPERVRLGKVWTTHSTWLIDCVKA
FELLPITDH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggccacatcgcgcacagagctgggctcacacagcgggggccctggccgcactc
gagaggctgctgcagtgctcggcctgttgcaaactgctgcaggagcctgtctgtcttgga
ggctgtgagcatgtattttgccgagtttgtgttgctgattctcttgggacgaattgtcca
gtgtgtcacactccaacctgggtaaaagacctgcagccaaacagacagctgcataatatt
gccgacctgtgcagccagcttcgagttctcctgaatgtcagagactctccaggtgccaaa
tgcaaaccaactggatcagtaatcggacctgaagaggtaactggtaaaaaatggcaaatg
agaacatggttcagtccacgcagtaaaaagatgaggtgtgtgctagatatgaatgcttcc
aggaaaagtcagaaagtggcttccagttctggttttaatgggtcatcatcatctgtgttt
gaattcatgtcatcaccatctcctccactcaactctccaaagaagaaagctccgattaac
tcaaaacagagagtaaggaaaagattagctgatgccaataaaggttggggttttggaaag
agaagaagcaagaagatggagagaggaaatgacagccctgaaaatatagattatcataga
gctgtttcattttgcagccaaccggtggtcctcagcagtcagggacaaacagttgcaggt
gagacagctgaagagtcacttgctgtgccacaggatgacaatgtaatcgactccagtgca
gaatctttgaccaagaatgtgattgagagttcttctgaagcatgctgtactccaacagtc
tccagttgcaaagatatttcccttggacaaactttcaatcaggaaggagacacattttct
cttgtccccatcccagccccacacacaaatgctaaaagattaaggaaatcatcagattca
tgcaacctgactcttgccaaaaagagcagaaaagaagtacagaattcttgctttgaaaag
tcatctgcaattgtttgtgagcaagctaagttagacacacaacaggaattttcagctact
ccagcacgtcaaactgagttaagcgggagcattaatcagacacaagccccttcttcaaca
gaaaagaactgtggtacaccatctagcagatacaatactcaaggaaagcaatgtgcaacc
ccaaaatctcctcaaacaccacaagctacagttagaagccagttacctggaagttgtgca
atgactccaatctcacctcttactcccacaatgaaaagaaatcacaagggtgagactcca
cttcacatcgctgccataaagggtgatattgcagcagtggagcagcttttggagaatgga
gcgaatccaaacatcaaagataatgctggatggacaccattgcatgaagcatgcaaccat
ggacacttggaaattgtagagcggctgctgaaatttggcgtgctcctgaatacaccagga
taccagaacgattctcccttgcacgatgctgtcaggaatggacacgtggatgttgtaaag
ctgctgatcttacaccgtgcctctcaaaatgtgatcaatatctttgggctgcggcctgtt
gattatgcaaattcagaagaaatgatagcagctttacatcactcccccaaaaatgaggat
ccagttgctgagcactgctttgcagtgacttcaaaccagagaagagatggacctattgtg
ttactgggaagtgatctccttggagccaagaagaaaaaacttgacaaattagtaaagctg
ttgaaagctgggaactgcactgaatttaataccttggtgacgcacattattgttcccaat
gaccaggctctctctaccatgaagtgtttgatggggatcatctctggctgctggcttgtg
aattttgaatgggtgacagcttgcctggagaagaatgacagagtagctgaagacgactat
gagataaatattgtaaatggtcctgaacgtgggcgacagaaccaggagcaacagctacca
aaactatttgatggctgccacttctatttcatgggtccattcaaaagctgcaagaaagaa
gatcttgttaatttggtcaaggttggtggggggcaggtccttgcccggcagccaaaacca
gacagtgacgtgactcagagcatcaacactgtggcttaccatgcatcccctggctcggat
cagtcattttgtacacagtatatcatctctgacaaagacagtaactataagcctgaaaga
gtgaggttaggcaaagtgtggactacccattctacatggctgattgactgtgtgaaagca
tttgaactgctgccgataaccgaccattaa
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