Chiloscyllium punctatum (brownbanded bambooshark): 140482029
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Entry
140482029 CDS
T11285
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04140
Autophagy - animal
cpun04148
Efferocytosis
cpun05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140482029 (vps16)
04148 Efferocytosis
140482029 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140482029 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140482029 (vps16)
Membrane trafficking [BR:
cpun04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140482029 (vps16)
Hops complex
140482029 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
140482029
NCBI-ProteinID:
XP_072434981
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Position
10:34412834..34458188
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AA seq
837 aa
AA seq
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MAFVTASWNPFGDVFYRKFNLYSDWKMKEDLSNCLIAAAPYAGPIALMINGSHKERSPSL
RPIMEIYSSSGNRIVSLPWKSGQVVHIGWTTNEDLLCIQDDGTVLIHDIFGTFKRHFSMG
NEVLQNRVVDAKVFPTAYGSGVVILTGAFRFTLATNIDDLKLRRFPEVPGLLRPPTCWAV
LMQDRQPKIVLATGKDVYVLDNASCTSVIPPGLGPQVCGFTQIAVSFNYKKLALFTDAGN
IWMGSSSFKDKLCVVETNFKTAPKQFVWCDRPKSDNPTVVGIWDKLLVITGKTKETIKFY
QDEDVHLVPEIDGVRIISSSNHEFLHEVPPACQDIFKIASMAPGALLLEAHKEYEKESQK
ADEYLREIKEQNLLFEAVQQCIEAAGNEYEPEMQKSLLRAASFGKCFISNFPPDTFVKMA
RDLRVLNAMRDYIVGIPLTYPQYKQLTIEILIDRLILRRLYPLAIRICKYMKISELQGAS
RILAHWACYKVQQKDEPDDSIARAINHKLGDTPGISYSEIAAKAYECGRIELAIKLLEYE
PRSGEQVPLLLKMKRSQLALLKAIESGDSDLVYTVVTYLKNEMNRGDFFMTLQNQPVALS
LYRQFCKHQEPETLKDLFNQDDNHQELGNFYVRSSYSNETTIEGRVAALQSAVDEYNKAK
NEFAAKITEEQIKLLRYQFRLQKESGKTYLDLSLHDTVQALLLDSKHKQAEQLYKDFKIP
DKRFWWLKISALAEKQDWEELEKFSKSKKSPIGYMPFVEICVKHRNKYEAKKYVAKVSPE
QKVKGYIMVGDLEQAVETATERKNENELNIILSKCTAATDQSIVEKINRAKAQILKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgtcaccgccagctggaatcccttcggggatgtgttttacaggaaatttaac
ctgtattctgattggaagatgaaagaagacctcagtaactgtttaattgcagctgcacca
tatgctggtccaatagctttgatgatcaatggatcacacaaagaaagatctccaagttta
cgacctataatggaaatctactcttcatcaggaaatcggattgtttccttgccatggaaa
agtggtcaggtggttcacattgggtggactaccaatgaggatctactctgtatacaagac
gatggaactgttctcatccatgatatttttggcacatttaagaggcacttcagcatggga
aatgaagtgttacagaaccgagttgtggatgccaaagtattccccactgcttatggctca
ggagttgttatattaactggtgcttttagattcacacttgccacaaatatagacgacctc
aaactccgacgatttcctgaagttccaggattgctgcgcccaccaacgtgctgggctgta
ttgatgcaagatcgacaacccaaaattgttcttgctactgggaaggatgtatatgtctta
gataacgcttcctgcacatctgtgattccacctggccttggaccgcaagtctgtggattt
acccaaattgctgtttcattcaattataaaaagcttgctctatttacagacgctggtaac
atttggatgggttcttcatcattcaaggacaaattgtgtgtagttgagacaaacttcaaa
acagcacctaagcagtttgtctggtgtgatagaccaaaaagcgacaatcctactgtagtt
ggtatttgggataaactacttgttataacggggaaaacaaaggagaccattaaattttat
caagatgaggatgttcacttagtgcctgagatcgatggtgttcgaatcattagttcttct
aatcatgaatttctacatgaagtcccacctgcttgtcaagatattttcaaaattgcctca
atggcacctggtgcacttctgctggaagctcataaagagtatgagaaagagagtcagaag
gcagatgagtatttacgagagatcaaagagcaaaaccttttgtttgaagctgtgcagcag
tgtattgaggcagcaggcaatgaatatgaacctgagatgcagaagtctctgctgagggca
gcctcttttggaaaatgcttcatcagcaactttccaccagatacatttgtgaagatggcc
cgcgatctacgtgtattgaatgcaatgcgagactatattgttggcattcctcttacttat
ccccaatataaacagctcactattgaaattctaatagacagattaattttgcgtagattg
taccctcttgcaataaggatttgtaaatacatgaaaatatcagaattgcagggagcaagt
cggatcttggctcactgggcctgttataaggttcagcagaaggacgagcctgatgacagc
attgctcgtgcaatcaaccacaaacttggggacactcctggtatttcctattctgaaatt
gctgctaaggcttatgaatgtggtagaatagagctagcgatcaagcttttagagtacgaa
ccaaggtctggtgagcaggtgcccttgctgttgaagatgaaaaggagtcagttagcatta
cttaaagcaatagaaagtggagacagtgatttagtgtatactgttgtgacatacttgaag
aatgagatgaacaggggagatttctttatgacacttcagaatcaaccagttgcactaagt
ctttatcgtcagttttgtaagcaccaagaaccagagacgctcaaagacctattcaaccag
gatgacaaccaccaagagcttgggaacttctatgtgcgttccagttactctaatgaaacg
acaatcgagggacgagtagctgctttgcagagtgctgtggatgaatacaataaagccaag
aatgaatttgctgccaagatcacagaagaacagataaaattgttgcgataccagtttcga
ttgcagaaagaatctggtaaaacatatttagacttatccttacatgatactgttcaagca
ctgttactggacagcaagcataaacaggctgaacaactttacaaagacttcaaaattcct
gacaaaaggttttggtggctgaagatttctgcactggcagagaaacaagactgggaggaa
cttgagaaattttctaaaagcaaaaaatccccaataggatatatgccttttgttgaaatc
tgtgtaaagcatcgtaacaaatatgaagctaagaaatatgtagcaaaggtcagtccagag
cagaaagtgaaaggatatattatggttggagacctagaacaagctgtggaaaccgcaaca
gaacgcaagaatgaaaacgagttgaacattattctttcaaaatgtacagcagctactgat
cagtcaattgtggaaaaaattaatcgagcaaaagctcagattttaaagaagtaa
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