Chiloscyllium punctatum (brownbanded bambooshark): 140482232
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Entry
140482232 CDS
T11285
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140482232 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140482232 (prpf40a)
Spliceosome [BR:
cpun03041
]
Complex A
U1 snRNP components
U1 related factors
140482232 (prpf40a)
Complex B
140482232 (prpf40a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DUF4936
Motif
Other DBs
NCBI-GeneID:
140482232
NCBI-ProteinID:
XP_072435453
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Position
10:complement(62953488..63017356)
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AA seq
901 aa
AA seq
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MSTSDTSNGPGQPTSFGNAPPMIPPPFMGPPGMPPPFPPMGMPPIGQRPPNMPPLPPGMM
PPMIPPMAGPPMGQMPGMMPPMMTGMMMSRMPTAPIQASAPPPGVSTTVTEVTSASPATI
VQVTNPTVSSVQQISATNESSGEEQPKKKSVWTEHKSPDGRTYFYNSETKQSTWEKPDEL
KSHAEQLLSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEELEEMIRAEEENGVKEAS
LSTVPTSVQEATTTTPVEVTENEVTTSEDHEKEQTIAVEQPEPEPVEITSQPAEEVTKQE
IQENDIPKKEEEVKKEPVRKTYTWNTKEEAKHAFKELLKEKGVQSNASWEQAMKMIINDP
RYSALPKLSEKKQAFNAYKIQTEKEEKEEARLRYKEAKENFQRFLENHEKMTSTTRYRKA
EQMFGETEVWTAVPERDRQEIYEDVLFFLAKKEKEQARQLRKRNTQALKNILDNMANVTY
CTTWSEAQQYLMDNPTFAEDEELQNMDKEDALVCFEEHIRALEKEEEEEKQRGLLRERRR
QRKNREAFQTFLDELHESGHLHSMSTWMELYPAISADIRFSKMLGQPGSTPLDLFKFYVE
DLKARFHDEKKIIKDILKDKSFVVEVNTTFEEFGTVISSDKRAATLDAGNIKLTFNSLLE
KAEAREREREKEEARKLKRKETAFKSMLKQATPPLEPESNWDEVRERFVNESAFEDITVE
SERKRLFKEFLQILEHECQHHHSKSKKHSKKSKKHHRKHSRSRSASESEDDDYHHSKKKK
RSHSKSPSDRTSSEESERSYKKSKKHKKKGKKRRRKSVTPESEGERERERERERDRDRRE
KERSRDDEKERNRHRSQSKHKSPRKATNKDTANWETSDSELSEGELEKRRRTLLQQLDDD
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcagatacttcaaatggaccaggacaaccaacatcttttggaaatgcccct
cccatgattccaccaccatttatgggaccgcctggtatgcctccaccgtttccacctatg
ggcatgccacctattggccagagaccaccaaatatgccacctttgccaccaggtatgatg
ccaccaatgattcctccaatggccggaccaccaatgggacagatgcctggaatgatgcct
cccatgatgacaggaatgatgatgtctcgtatgccaactgctcccatacaagcaagtgca
cctccgccaggggttagcaccacggtgacagaagtaacatcagcatccccagccactata
gttcaggttacaaatcctacagtttctagcgttcagcaaatttctgctactaatgaatct
tctggagaagagcagcccaaaaagaaatctgtttggactgaacacaaatctccagatgga
agaacttatttctacaattctgagacaaaacagtccacatgggagaagcccgatgagctg
aaatcgcatgcagagcaattattatcaaaatgcccttggaaagaatacaaatcagacact
gggaaaccgtattattataattctcaaacaaaagagtctcgatggacgaaaccaaaggaa
ttagaggaattggaagaaatgatcagagctgaggaagaaaatggtgtaaaggaagcttct
ctttccactgtgccaacttctgttcaagaggcgacaacaaccaccccagtggaggttact
gagaatgaagttacaacctctgaagatcatgaaaaggaacaaacaatagctgttgagcag
cctgaacctgaacctgtagagatcacttctcaaccagcagaagaagtaacaaagcaggag
attcaagaaaatgatattccaaaaaaagaggaagaagtgaaaaaagaaccggtgaggaag
acctatacctggaacacaaaagaggaggcaaaacatgcatttaaagagctgttgaaggaa
aagggtgttcagtcaaatgcctcatgggaacaagcaatgaagatgattataaatgatcct
aggtatagtgcattaccaaaacttagtgaaaagaaacaagcatttaatgcatataaaata
caaactgaaaaagaggaaaaggaagaagccagactccgctataaagaagcaaaagaaaac
tttcagcgatttcttgaaaaccatgaaaaaatgacatctactactagatacaggaaagct
gaacagatgtttggagagacggaagtgtggacagcagttcctgagcgggatcgacaggag
atctacgaggatgttttgtttttcttggccaaaaaagaaaaggagcaagcaaggcaattg
agaaagaggaatacgcaagcactgaaaaatatccttgacaatatggctaatgtaacatac
tgcaccacgtggtcagaggcacagcagtatttaatggataatccaacatttgcagaagat
gaagagttgcaaaatatggataaagaagatgctcttgtttgttttgaagagcatataaga
gcattagagaaggaggaagaggaggagaaacaacgaggtttacttagagagcggagaagg
cagcgcaaaaatagggaggcctttcaaaccttcctggatgagttgcatgaaagcgggcat
ttgcactccatgtctacctggatggaattgtatcctgctatcagtgctgatattagattt
tctaaaatgttgggccaacctgggtctactccccttgatcttttcaaattttatgtagaa
gacctaaaagcacgcttccacgacgaaaagaaaataataaaagatattttgaaggataaa
agttttgtggtagaagtcaatactacatttgaagaatttggtacagtcattagttcagac
aagagagcagccacgcttgatgctggtaacattaaactaacttttaacagcctgttagag
aaagcagaagctcgagagcgtgaaagagaaaaggaagaagctcggaaactaaagcgaaaa
gaaactgctttcaaaagcatgttaaagcaagccactcctcctcttgaaccagaatcaaat
tgggatgaggttcgagagcggtttgtaaacgaatctgcttttgaagacattactgttgaa
tctgagagaaaaagacttttcaaggaatttctacaaattctcgagcatgaatgccaacat
catcattcaaagagcaaaaaacattccaagaagtcaaaaaagcatcacaggaaacattct
cgttctcgttcagcctcagaatcagaagatgatgattatcaccattcaaagaaaaagaaa
cgttcccattcaaagtccccttcagacagaacctctagtgaagagtcagagcgaagttac
aaaaagtccaaaaaacacaagaaaaagggcaaaaaaagaagacgcaaatctgttactcct
gaatctgaaggagagcgagaacgtgagcgggaaagagaaagggaccgggatagacgagaa
aaagaaagaagtagggatgacgagaaagaaagaaatagacacagatcgcagtcaaagcac
aaatcacccagaaaagccaccaacaaagatacagcaaattgggaaacctctgatagtgag
ctaagtgagggggaactggaaaaacgaaggcgaactctcttgcagcaacttgatgatgac
caataa
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