Chiloscyllium punctatum (brownbanded bambooshark): 140483161
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Entry
140483161 CDS
T11285
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04517
IgSF CAM signaling
cpun04520
Adherens junction
cpun04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140483161 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
140483161 (afdna)
04530 Tight junction
140483161 (afdna)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
140483161
NCBI-ProteinID:
XP_072437287
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All DBs
Position
11:86495113..86727349
Genome browser
AA seq
1923 aa
AA seq
DB search
MSSREEERTKLAEIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKVAGNFATKCIRV
SSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERRLDQDEKPLVVQLNWNKDD
REGRFVLKNENAFLPPKKSQSNGPEKEKEGVIQNFKRTLSKKEKKEKKRREKEALMQTVD
DDRPISSGDGENSSSHLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEQRMQEFRSGD
GRPDSGGTLRIYADSLKPNIPYKTILLSTTDTSDFAVGEALDKYGLEKENPKEYCIARVV
LPPGVQQSDDKGAKETLLDDDECPLQIFRDWPSDKGTLVFQLKKRPSEHIPKNVRKQDGR
LPKGKERNDNSGYGSSLPPEKLPYLVELSPDGSDSRDKPKLYRLQLNVTDVGTEKSDENS
IQLFGPGIQPHHCDLTNMDGIVTVTPRSFDAETYVDGQHITETTMLQSGMNIQFGSSHVF
KFVDPAQNHVSMRPMDAGPMVKSQRIKSGQGSRSVQETTFDLDGDIHSGMPLTMSKSSDR
LDSEHTVSSSSSSERNVVKPIVRVEQQDYYKQEIRPQDGQGHELTLPATIEFRESSEDSF
LSAVVNYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDMSPSERTHKVIAIVNKMVSMME
GVIQDIAQYEQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFK
YLVHCLQSDLNNYIPAFLEDPEEASPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFS
QLFHFINMWLFNKLVTEPDSCLCSHYWGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQ
ATTLLTMDKYLAEDISNINNTCFKLNSLQLQALLQSYHCAQDEPYIPQELIENVVALAEN
TADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLEPLCQRGFCRLT
SHSRSPGTWTVYFESADYESNFPLDTELAEPNRKEPEIITVTLKKQNGMGLSIVAAKGAG
QDKLGIYVKSVVKGGAADLDGRLAAGDQLLSVDGRSLVGLSQERAAEFMTRTGSVVTLEI
ARQGAIYHGLATLLNQPSPMMQRASDRRGTGKPRPKSEGFELYNSNPQNGTPENSPMGWT
EYSEPKKPPGDDRLLKNRADHRSSPNVANQPPSPGVKPVYSTAPTSKIQSVSTGNLCAEE
QVLPTRPEAYPIPTQTYAREYFTFPTSRSQDRVSPVPGQWQHYDDRTMMQEQTFSGTVQR
GTRSQEELHETKAFHPEKLRQEDMLHRDAEYQKDLDRKPDVWAHQISSMDSSTSGQEQLN
YSSKSLPPSAIAPHKSGPGRWKTPAPNQATPVAVSQPIRMENQLPPPPPPPPVHYAVDFD
NSHSDLPLPPPPPPPPASQGSNPSSVVDRRKREDQQRWYEKEKARLEEERDRKRREQDRK
IGQMRGPPPLHITPSQPVHVTPVIQQTRPEKMASLSRPQDTVIRELQPQQQPRTIERRDL
QYITISKEQMPGSDSLSPDPWKRDAKEKMEKQQQQHLLEMLSKEIQELQNKPDRTSEEND
RLRKLMLEWQFQKRLQESKEKDDDDEEEEDDDVDATLIMQRLEVERRARTVPAISVLDLL
QDEERRRHQQLEDIRKREAEERARQDNERHRQEEEQARRETEEKRRQEEEYYTRLEAERR
RQQEEAERKLLQPDEPGLYRPPLPRNYASETQQYEFPPPSHSSNAPPPPQRNISYMKTQI
VSPDTVYTAKFVPYNDEDEEDANLSGQDKYSITRKSYGDLPSAPKQPPFIRQPRPVSDGY
YLSNSFRPPSANANSTAPKAGVPPPPPTKPNFVPQSGSKGFGPYGGSTTSSIGANEVYRG
PREKRPEQNKGNGQEPEAPAVKGSPENLTFKERQRLFSHGQDISNKVKASRKLMELENEL
NTK
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcgaggaggaacgcacgaaactggcggagatcattaaccactggaatgcc
aaccggctggacctgttcgaaatcagccaaccgaccgaggatctggaattccatggtgtg
atgagattttattttcaagacaaagtagcagggaactttgcaacaaaatgcatcagagtg
tccagcactgctacaacacaagatgtgatagagactcttgcagagaagtttcgcccagat
atgcgtatgctgtcctcacctagatactcactttacgaagtgcatgttagtggtgaggaa
cgtaggctcgatcaggatgaaaagcctttggttgtacaactaaactggaacaaggatgat
agggagggaagatttgttttgaaaaatgaaaatgcgttcctgccaccaaagaagtctcaa
agcaatggtccagaaaaggagaaagagggtgtgatccagaactttaaacggacactgtcg
aagaaggaaaagaaagagaaaaagaggcgggaaaaggaagcgttaatgcaaactgtagat
gatgatcgacctatttccagtggtgatggtgagaactcaagttcacatcttgcagcggag
gtatacaaagacatgccagagactagcttcacccgtacaatatctaaccctgaagtagtt
atgaaacgcagacgacaacaaaagttagaacaaagaatgcaagaatttcgtagtggtgat
ggacggcctgattcaggtggaactcttaggatttatgcagatagtttaaagccgaatata
ccatacaagaccatcttgctgtccacaacagatacgtcagactttgctgtaggagaagcc
cttgacaagtatggattggagaaggaaaacccaaaggaatattgtatagcacgggtagta
ttacctcctggtgtgcaacagtctgatgataaaggtgctaaagagactctgcttgatgat
gatgaatgtccactgcagattttcagagactggccaagtgacaaaggtactttggttttt
cagttaaagaaacggccatctgaacatatcccaaagaatgtaaggaaacaagatgggagg
ttaccaaaaggaaaagaaaggaatgataattcaggctatggttcttcgttgcctcctgag
aaactgccataccttgttgaactgagtcctgatggttcagattccagagataaaccaaaa
ctgtatcgtttacaactgaatgttacagatgttggcactgaaaagtcagatgagaactcc
atccagctctttggtccaggaattcaacctcatcattgtgatcttactaacatggatggc
atagtaacagttactcctcgcagttttgatgctgaaacatatgttgatggccagcacatc
actgagaccaccatgttgcaaagtggcatgaacattcagtttgggtcatcacatgtgttc
aagtttgtggatcctgctcagaatcatgtgagcatgagacccatggatgcaggacctatg
gtcaagagccagagaattaaatctgggcaagggtcccgaagtgtccaagaaactacattt
gatctggatggcgacattcacagtggtatgccattaactatgagcaagagttcagataga
ttggatagcgagcacacagtttccagttccagttcaagtgaacgcaatgtggtgaagcca
attgtcagagtggaacaacaagactactacaagcaagagatcagaccacaagatggacaa
ggtcatgagttgactctgccagcaacaatagaatttcgagagagctctgaagactccttc
ctgtctgcagttgttaactacaccaatagttctactgtccatttcaagctgtctccgaca
tatgtactctacatgacttgtcgatatgtcctgtctagccagtaccgacctgatatgagc
ccttctgaacgtactcataaagttattgcaatagttaacaagatggttagcatgatggaa
ggagttattcaggatatagcacagtatgaacagaagcagaagaatattgcaggtgctctt
gccttctggatggcaaatgcatcagaacttctcaacttcatcaaacaggacagagacctg
agtagaatcacgctggatgcacaggatgtcttggcccatttggtgcaaatggctttcaaa
tacttggtacactgtcttcaatcagatctgaacaattatataccagcatttcttgaagac
ccagaggaagcaagtccacaaagacccaaaatagatgatgtcttgcacacattgacagga
gcaatgtctttgttgcggcgttgccgtgtgaatgctgctctcaccatccaactgttctct
cagctttttcattttattaacatgtggctattcaataaactggtcacggagccagactct
tgtctttgttctcattactggggagctatcatccgacagcaacttggtcacattgaagcc
tgggctgagaaacagggcttggaattggctgcagactgtcatcttagcagaatagtacag
gcaaccacattattaacgatggataagtatttggcagaagacatttcaaatatcaacaat
acttgttttaagttgaattcgttgcaattgcaagcgctacttcaaagctaccactgtgca
caggatgagccctatatccctcaggaattaattgaaaatgtagtggcattagcagagaac
acagctgatgaacttgcacggagtgatggtagagaggtgcaattggaagaggaccctgac
ctacagctaccttttctcctacctgaagatggctattcctgtgatgttgttcggaacatt
cctaatggccttcaggaattcttagaaccactttgtcagagaggtttttgtagactaacc
agtcattcacgatcacctggtacatggacagtttattttgagagtgctgactatgaaagt
aattttccacttgatactgagttggctgagcctaatcgtaaagaaccagagataattaca
gtgacactgaaaaagcaaaatggaatgggcctaagcattgtagctgctaagggtgcggga
caggataaactaggaatctatgttaaatctgtggtgaaaggaggagctgcagacttggat
ggtcgtttggctgctggagatcaattactgagtgtagatggtcgcagccttgtgggactt
tcacaagaaagggctgcagagtttatgacaagaactggttctgtggtcactttagaaata
gcaagacaaggagctatttaccatggtttggccactctactcaaccaaccttctccaatg
atgcagagagcctctgatcgtcgtggcacaggcaaacctcgccccaagagtgaaggcttt
gaattgtacaatagtaatcctcagaatggaacaccagaaaattccccaatgggttggaca
gaatactctgaaccaaagaaaccacctggggatgataggctgttgaaaaaccgagcagat
catcgatctagtcctaatgttgcaaaccaacctccaagtcctggtgtcaagcctgtttat
tctaccgcacctacctcaaagattcagtcagtctccacggggaacctttgcgcagaggag
caagtattgcctacaagacctgaagcctatccaattcccacgcaaacatatgccagggaa
tatttcactttcccaacatctagatcccaagacagagtgagtcctgtgcctggacagtgg
caacactatgatgacagaacaatgatgcaggagcagacattcagtggcactgtacagcgt
ggaactcgttcacaagaagaattacacgagacaaaagcttttcacccagaaaaattgcga
caggaagatatgcttcatagagatgcagaataccagaaagacttggatcgaaagccagat
gtatgggctcatcagatttcctcaatggattcaagtacatcaggtcaagagcagctgaac
tactcttcaaaatctctcccaccaagtgcaattgctcctcataaaagtgggcctggacgc
tggaaaactccagctccaaatcaggctactccagttgcagtttcccagcccatccgaatg
gaaaatcagttgccaccacccccacctcctccaccagtacattatgcagttgactttgat
aattcccatagtgacctacccctcccaccaccaccaccaccaccacctgcttcacaagga
tcaaatccaagctctgtggttgatcgtagaaaacgagaagatcagcagcgttggtatgaa
aaagaaaaagcacggttggaggaagagcgggacaggaaacgccgtgaacaggacaggaaa
attggccaaatgaggggtccaccacctttgcacataactccatctcaacctgttcatgtt
actccagtaatccagcaaacaaggccagaaaaaatggctagtctatcacgacctcaagat
acagtaatccgtgaactacagcctcagcaacagcctcgcactattgaacgcagggacttg
caatacattacaattagcaaagaacagatgcctgggagtgatagtctttcgcctgatccc
tggaaacgtgatgcaaaggagaaaatggagaaacaacaacagcaacacctcttggagatg
ctcagcaaagagatacaggagctacagaacaagcctgatcgtacatctgaggagaatgac
cgtcttcgcaaacttatgcttgagtggcagtttcaaaagcggctacaggagtccaaagag
aaggatgatgatgatgaagaggaagaagatgatgatgttgatgcaacacttatcatgcaa
agattggaagtggaaaggcgggcaaggactgttccagccatctcggttctagatttgttg
caagatgaagaacgcaggcgtcatcagcaactggaagatatccgaaaaagagaagcagaa
gaaagagcaaggcaagataatgagcgtcatcgtcaagaggaggagcaagcaaggagagaa
actgaagaaaagagaagacaggaagaagaatattatacgcgtttggaagctgaaaggcgt
agacagcaggaagaagctgagaggaagttgctgcaacctgatgaacctggtctgtacagg
cctccccttccaaggaactatgcttctgaaacccagcagtatgagttccctcccccatcc
cattcatctaacgctcctccccctcctcagagaaacatctcttacatgaaaacacagatc
gtctcccctgacacagtttacactgccaagtttgtcccatacaatgatgaggacgaggaa
gatgcaaatctttcaggtcaggataagtactccatcacaagaaaatcgtatggtgatctc
ccttctgcccctaagcagccgccattcattcgtcaaccccgcccggtttcagatggctac
tatctttcaaactcattccgaccaccatctgccaatgccaacagtactgctccaaaagct
ggtgttccccctccccctccaaccaaaccgaacttcgtgccacagagtggttcaaaagga
tttggtccttatggcggatcaactacaagtagcattggagcaaatgaagtttacagaggc
ccgagagagaagcgtcctgagcagaataaagggaacggccaagagccagaagcaccggct
gtgaaaggatccccagaaaatctaacatttaaagaacgtcagcgtcttttctcacatgga
caggacatttctaacaaagtgaaggcatcacgaaaactgatggaactagaaaatgagctg
aacacaaaataa
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