Chiloscyllium punctatum (brownbanded bambooshark): 140483261
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Entry
140483261 CDS
T11285
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140483261 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140483261 (taf5l)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140483261 (taf5l)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140483261 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
140483261 (taf5l)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140483261 (taf5l)
STAGA complex
140483261 (taf5l)
TFTC complex
140483261 (taf5l)
SAGA complex
140483261 (taf5l)
SLIK complex
140483261 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Beta-prop_DCAF12
Ge1_WD40
Mala_s_1-like
DUF7165
Motif
Other DBs
NCBI-GeneID:
140483261
NCBI-ProteinID:
XP_072437501
LinkDB
All DBs
Position
11:99075685..99115595
Genome browser
AA seq
587 aa
AA seq
DB search
MKRVRTEQIQTAVALYLRRRQYVDSDGALKQGPKFSQTAEEMATNLTVQTESGSPNVVSA
APCQADPNQYEIQFARLKIFLFDTDSKYSQEVKQLLYPLFVYLHLDMVHSGLKSAADSFY
SRFHGMFLQSTDQKDIMEQLRTTLNSQDIYSNSKLRSLTENKYVLSLTEESYNYLLRYLQ
SDNNSALCKVLASRVQLDVQCSPQTGYQLYNAGTLSRTEGVGLEPSELPSTMLQNEAALD
MLQDSIKRVKDGPPSLTTICFYAFHNTDQLLNTAEISPNNKLLSAGFDNSCIKLWSLRAK
KLKYGPQQVDVSRINLACDILDDEVEDDVGSEMKILRGHCGPVYATKFLSDNSGLLSCSE
DTTVRYWDLCSFKNTGLYQGHAYPIWDIDISPLSLYFVTGSHDRTARLWALDRTYPLRIY
AGHLADVDCVKFHPNSNYIATGSIDKTVRLWSTQQGNTVRLFTGHRGPVLALAFSPNGKY
LASAGEDQRLKLWDLASGTLFKELRGHTDNITNLAFSPDSSLIVSASVDNSVRVWDIHNT
YSNSLVDGSSSELVGVYMGPTSNLLSVQFMACNLVLVTGVAQEKKEQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtacgtacagaacagattcagactgcagtggctctctacctccgaagaaga
caatatgttgactctgatggagccctgaagcaaggacccaagttttctcagactgcagaa
gaaatggcaactaacttaacagttcagacagagtctggttctcccaatgtggtgtctgca
gctccctgtcaagctgatcctaatcagtatgaaatacagtttgcacggctgaaaatcttc
ctttttgataccgactcaaagtacagccaagaagtgaaacaattgctctatcctttattt
gtctacctccaccttgatatggttcacagtggtctgaagagtgcagctgatagtttctac
agtcgctttcatgggatgttcctacaaagtacggatcagaaagacatcatggaacagctc
cggactactctaaatagccaggacatttactcaaactccaagctgcgaagcctgaccgaa
aataaatatgttcttagccttactgaagaaagttacaactatctcctccgctacctccag
agtgacaacaatagtgctttgtgcaaggttctggcctctcgtgttcagctggatgtgcag
tgttctccacagacaggctatcagctgtataatgccgggacgctatctcgcaccgaaggg
gtgggcctggagccctctgagctaccctctactatgttgcagaatgaagctgcgttggac
atgttgcaggacagcataaaacgggtaaaagatgggcctccctccctcacaaccatttgt
ttctatgcttttcacaacacggaccagctgctcaatactgcggaaatttcgccgaacaat
aaactgctcagtgctggctttgataactcttgcatcaaactctggagcttgagggcgaag
aaactcaaatatggcccacagcaagtggacgtctctcggatcaacctcgcctgtgacatc
ctggatgatgaggtggaagatgatgtgggcagtgaaatgaaaatcctacgaggacactgt
gggcctgtgtatgctaccaagttcctctctgataattcaggacttctgtcttgttcggaa
gacacaacagtccgatactgggatttgtgcagtttcaagaacactggtttgtatcaagga
catgcttatcccatctgggacatcgatattagccccttgagcctttactttgtgactggg
tcacatgaccggacagcaagactttgggcacttgacagaacgtaccctctacgcatttac
gcaggccacctagcagatgtagactgtgttaagttccatccaaattctaattacatagcc
acaggctcaatagataaaaccgtgcggctctggagtacgcagcaagggaatactgtccgt
ctcttcacaggacatcggggacctgtgctggcattagctttctctcctaatggaaagtac
ttggcctcagcaggtgaagatcagcgactaaagttgtgggaccttgcatcaggtacttta
ttcaaagaactgagagggcatactgacaatataactaatcttgcatttagtcccgacagc
agtttgatagtttctgcatctgtggataattcggtccgtgtgtgggatattcataacact
tattcaaattcactggtggatggttcctccagtgagctggtgggtgtatacatgggacct
accagtaaccttttgagtgtgcagttcatggcctgcaatctggtcttggttactggtgtt
gcacaagagaaaaaggaacaataa
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