KEGG   Chiloscyllium punctatum (brownbanded bambooshark): 140483261
Entry
140483261         CDS       T11285                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cpun  Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cpun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    140483261 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpun03021]
    140483261 (taf5l)
   03036 Chromosome and associated proteins [BR:cpun03036]
    140483261 (taf5l)
Transcription machinery [BR:cpun03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     140483261 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     140483261 (taf5l)
Chromosome and associated proteins [BR:cpun03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     140483261 (taf5l)
    STAGA complex
     140483261 (taf5l)
    TFTC complex
     140483261 (taf5l)
    SAGA complex
     140483261 (taf5l)
    SLIK complex
     140483261 (taf5l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I TFIID_NTD2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Aladin NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Tricorn_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Vps41 PEP5_VPS11_N PROPPIN WD40_like Beta-prop_VPS8 WD_LRWD1 Beta-prop_DCAF12 Ge1_WD40 DUF7165
Other DBs
NCBI-GeneID: 140483261
NCBI-ProteinID: XP_072437501
LinkDB
Position
11:99075685..99115595
AA seq 587 aa
MKRVRTEQIQTAVALYLRRRQYVDSDGALKQGPKFSQTAEEMATNLTVQTESGSPNVVSA
APCQADPNQYEIQFARLKIFLFDTDSKYSQEVKQLLYPLFVYLHLDMVHSGLKSAADSFY
SRFHGMFLQSTDQKDIMEQLRTTLNSQDIYSNSKLRSLTENKYVLSLTEESYNYLLRYLQ
SDNNSALCKVLASRVQLDVQCSPQTGYQLYNAGTLSRTEGVGLEPSELPSTMLQNEAALD
MLQDSIKRVKDGPPSLTTICFYAFHNTDQLLNTAEISPNNKLLSAGFDNSCIKLWSLRAK
KLKYGPQQVDVSRINLACDILDDEVEDDVGSEMKILRGHCGPVYATKFLSDNSGLLSCSE
DTTVRYWDLCSFKNTGLYQGHAYPIWDIDISPLSLYFVTGSHDRTARLWALDRTYPLRIY
AGHLADVDCVKFHPNSNYIATGSIDKTVRLWSTQQGNTVRLFTGHRGPVLALAFSPNGKY
LASAGEDQRLKLWDLASGTLFKELRGHTDNITNLAFSPDSSLIVSASVDNSVRVWDIHNT
YSNSLVDGSSSELVGVYMGPTSNLLSVQFMACNLVLVTGVAQEKKEQ
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgaagcgagtacgtacagaacagattcagactgcagtggctctctacctccgaagaaga
caatatgttgactctgatggagccctgaagcaaggacccaagttttctcagactgcagaa
gaaatggcaactaacttaacagttcagacagagtctggttctcccaatgtggtgtctgca
gctccctgtcaagctgatcctaatcagtatgaaatacagtttgcacggctgaaaatcttc
ctttttgataccgactcaaagtacagccaagaagtgaaacaattgctctatcctttattt
gtctacctccaccttgatatggttcacagtggtctgaagagtgcagctgatagtttctac
agtcgctttcatgggatgttcctacaaagtacggatcagaaagacatcatggaacagctc
cggactactctaaatagccaggacatttactcaaactccaagctgcgaagcctgaccgaa
aataaatatgttcttagccttactgaagaaagttacaactatctcctccgctacctccag
agtgacaacaatagtgctttgtgcaaggttctggcctctcgtgttcagctggatgtgcag
tgttctccacagacaggctatcagctgtataatgccgggacgctatctcgcaccgaaggg
gtgggcctggagccctctgagctaccctctactatgttgcagaatgaagctgcgttggac
atgttgcaggacagcataaaacgggtaaaagatgggcctccctccctcacaaccatttgt
ttctatgcttttcacaacacggaccagctgctcaatactgcggaaatttcgccgaacaat
aaactgctcagtgctggctttgataactcttgcatcaaactctggagcttgagggcgaag
aaactcaaatatggcccacagcaagtggacgtctctcggatcaacctcgcctgtgacatc
ctggatgatgaggtggaagatgatgtgggcagtgaaatgaaaatcctacgaggacactgt
gggcctgtgtatgctaccaagttcctctctgataattcaggacttctgtcttgttcggaa
gacacaacagtccgatactgggatttgtgcagtttcaagaacactggtttgtatcaagga
catgcttatcccatctgggacatcgatattagccccttgagcctttactttgtgactggg
tcacatgaccggacagcaagactttgggcacttgacagaacgtaccctctacgcatttac
gcaggccacctagcagatgtagactgtgttaagttccatccaaattctaattacatagcc
acaggctcaatagataaaaccgtgcggctctggagtacgcagcaagggaatactgtccgt
ctcttcacaggacatcggggacctgtgctggcattagctttctctcctaatggaaagtac
ttggcctcagcaggtgaagatcagcgactaaagttgtgggaccttgcatcaggtacttta
ttcaaagaactgagagggcatactgacaatataactaatcttgcatttagtcccgacagc
agtttgatagtttctgcatctgtggataattcggtccgtgtgtgggatattcataacact
tattcaaattcactggtggatggttcctccagtgagctggtgggtgtatacatgggacct
accagtaaccttttgagtgtgcagttcatggcctgcaatctggtcttggttactggtgtt
gcacaagagaaaaaggaacaataa

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