Chiloscyllium punctatum (brownbanded bambooshark): 140483484
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Entry
140483484 CDS
T11285
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpun03036
]
140483484
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpun04812
]
140483484
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
140483484
Microtubules and associated factors
gamma-tubulin ring complex
140483484
Cytoskeleton proteins [BR:
cpun04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
140483484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_THOC3
WD40_RFWD3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_VPS8
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_LRRK2
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
140483484
NCBI-ProteinID:
XP_072437777
LinkDB
All DBs
Position
12:complement(58144061..58207229)
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AA seq
412 aa
AA seq
DB search
MLSDEAPPRFCSHGQQPLRDLKFSCFQQSMLGSVGDDGSFRTWDINSLQLQHSFDHVHKA
PATALCFSPVIEPLVITVGLDKQISAVDVRSKSVLYCIRADCPLTALELLPDGTALLIGT
SRGKVSLYDLRNMEFPVKSSKAHKGAVRCIKLQAVRGKFQAAWPTVLNEVKVGDSSATAN
DATNNIVSALPTDPSSSQVNTITLTKPSPQFRKVIFLARNSFGDVFSPIRSDMDHTDIST
TEFSSPSLSCASNCCPQSKNGFHVEKLANLAKLAVKQFSEDAGSTAERFDHVQSLHNCDS
KFEMIEQKPNRMTLANTLNTPPGQAGEEGTEEWAVSLPKTQRVQNLLKDALEEFSEEHHK
EVVGLQLAMIHAFHIQQLAIREALLKHLKVNEELLEEYVTLKEENEWLKAFQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgatgaagctccccccaggttttgctctcatggtcaacagccccttcgtgac
ctgaagttctcttgcttccagcagtcaatgttggggagtgttggtgatgatggcagtttt
agaacatgggacatcaacagcctacagttgcagcatagctttgaccatgtccacaaagcc
cctgcaacagccctttgcttctcaccagtgattgagccattggtcatcacagttggcctg
gataaacaaatctctgcagttgatgttcggagcaaatctgtattgtactgtattcgagca
gattgtccactaactgcacttgagctcttaccagatgggactgctctgttgattggaacc
tcccggggaaaggtcagcctatatgacctcagaaacatggaatttccagtgaaatcttcc
aaggctcacaagggtgctgtacgatgtattaaacttcaggctgtgagaggcaagtttcag
gctgcttggcctactgttttaaatgaagtaaaggtgggagactccagtgcaacagcaaat
gatgccactaacaacattgtcagtgccttgcccaccgatccctcttcttcgcaagtcaac
acgatcactttaaccaaaccctctccacaatttagaaaggtaatatttcttgcaagaaac
agctttggagacgtcttctcacctataaggtcagacatggaccatacggacatttcaacc
actgaattcagctcaccttctctcagctgtgcctcaaattgctgtcctcagagtaaaaat
ggattccatgttgagaagctagctaaccttgcaaagttagctgtgaaacagttcagtgaa
gatgccggttcaacagcagaaagatttgaccatgtgcagagcctacacaattgtgattca
aaatttgaaatgattgaacaaaagcctaatcgtatgaccttggccaatactttgaacact
cctcctggccaggcaggtgaagaaggaacagaagaatgggcagtttccttgccaaagacc
caacgagtacaaaacttactgaaagatgcattggaagaattcagtgaggagcaccataag
gaggtggttggactgcagctggccatgattcatgcatttcacattcagcagcttgcaatt
cgtgaagccctacttaaacacttaaaagtgaatgaagaattgctggaggaatatgtgacc
ttaaaggaagaaaatgagtggctgaaggcattccagtga
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