KEGG   Chiloscyllium punctatum (brownbanded bambooshark): 140483570
Entry
140483570         CDS       T11285                                 
Name
(RefSeq) host cell factor 1-like
  KO
K14966  host cell factor 1
Organism
cpun  Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03083  Polycomb repressive complex
cpun04980  Cobalamin transport and metabolism
cpun05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpun00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    140483570
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    140483570
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    140483570
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpun01009]
    140483570
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpun03036]
    140483570
   03029 Mitochondrial biogenesis [BR:cpun03029]
    140483570
Protein phosphatases and associated proteins [BR:cpun01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     140483570
Chromosome and associated proteins [BR:cpun03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     140483570
   HMT complexes
    COMPASS/SET1 complex
     140483570
    MLL-HCF complex
     140483570
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     140483570
Mitochondrial biogenesis [BR:cpun03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    140483570
SSDB
Motif
Pfam: Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_2 fn3 Kelch_FKB95 Beta-prop_TYW4 NANM
Other DBs
NCBI-GeneID: 140483570
NCBI-ProteinID: XP_072437887
LinkDB
Position
12:complement(5153728..5269753)
AA seq 1642 aa
MGVVPRAKCCRRTIRAALIVGLVSGEGSCADNIRAPFFFARRLFGESGAKMAAPILKWKR
VTNSSGPVPRPRHGHRAVSIKELMVVFGGGNEGIVDELHVYNSATNQWFIPAVRGDIPAG
CAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKKLKAKAPKNGPPPCARLGHC
FSVIDSKCYLFGGLANDSEDPKNNIPRYLNDLYILELKPGSGVVGWDIPVTHGTPPPPRE
SHTAVVYRNKEKKPKLVIYGGMSGCRLGDLWILDIESLTWNKPEVAGVPPLPRSLHSATM
IGSKMYVFGGWVPLVLEDVKAPTHEKEWKCTNTLACLDLETMTWTQISTESFEDSIPRAR
AGHCSVSISTRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPPAPGKVQLVRASTNSLEV
SWGLVSTADSYLLQLQKYDVPTVTAAVTPLPSSAVAGIRPACSPAPAAAASVSPSPVQSG
VRFVTQTTPAVGTPAASLTTSATSPSVVRIPMAAASPRGPASPMIRATTGQPVVASAASA
APLITVQRQAAPQGKTPNTVATLPPGVRMVMPAQTTAGTALTSSPQMSGMAALAAAAAAT
QKIPSSTAVTSVGLHPSTTLVKTIAVAPGVSTLATTVKVATPSVMVNTPATSMLKTAAAQ
LVTPTHAATSTASARPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISMAGGST
LISNLGKVLTLQAKPGQQATISNPGSTGPLTQIFQTKGQLPPGATILKLVTSADGKPATI
ITTSQAGNVGLKQTFVSLSNVSPASSKPATTILKTIPMSALISQPGTTGVTGSPGMKSPI
TIITTKVMTSGTGTPTKFITAVPKLQTGQQGLTQVLLKGAAGQPGTILRTLSGTPVTGVR
LITPVTVSAAKPALTTLVVKGTTGASTLGTIAGTTLAGVSTVSPTLNTPIATLGTIANLT
GQIISASPNTTQKLTAVTGATSPIITIQPVSEPNRVTIVASPGGMVAQQAQQLVNSGSAL
VAAPRVATVNSETQTHRLEFVEMPVRCSNPPHETSETNTTNTSTTTTANIAANQVQPPAM
NAQGIPESVHGETATAGTTNTATTASTAQSGAVTMVTQSTPAPGPSTQAIPSTEGQSNSI
EQGSVSTMGQNVVQILPASSTGVGATIAVRVSSTNQETAAALNPQPRVRLQQDQLLPPRE
LLADSRPETLAELGLSPEELAVAAAAEEAARFAALEEEAKATTATQTSLVSKGAAPAARQ
ETMDTSTAELTTIQPAQLSHQALQTLVSLQSIVPLAELAQQDIERAHQQQAAESNQPSRP
AEALAPADSLNDSTSETNGPQELPSTVSSVQLPILKTTGLTPYTSLLTSTTNQNSSPIKT
QAATTLAQVANGIGLPASKQDASPNTQPKPTARKEPNQWYDVGVFKTLSTVVVSYFLPAE
GSQGEEDGSGDNIPDHSNLKTERLESGTAYKFRVAGINACGRGPFSEVSAFKTCMPGFPG
APSAIKISKVAEGAQLSWEPPAVTSGTIIEYSVYLALPGSQAADPKPAGTSHLLFVRVYC
GPVPSCLVSSSNLANAHIDTTTKPAIIFRIAAKNEKGYGPATQVRWLQDISKDGARPATK
RSVASSDDKLISVNKKPRGDGS
NT seq 4929 nt   +upstreamnt  +downstreamnt
atgggagtagttccccgggcgaagtgttgcaggcggacgattagggcagccctgatcgtg
ggtcttgtcagtggggaagggtcctgcgctgacaacatccgggctccgttcttcttcgcc
cgccgccttttcggggaaagcggcgccaagatggcggctcccatactgaaatggaagcgc
gtaaccaactcgagcgggccggtcccccggcctcgccacggccatcgcgccgtctctatc
aaagagctgatggttgttttcggcgggggcaacgaagggatcgtggacgagctgcacgtt
tacaattcagcaaccaatcagtggttcattccagcagtgaggggggacattcctgcaggc
tgcgcagcctatggatttgtatgcgatgggactcgactgttggtgttcggtggcatggtg
gagtatggaaaatacagcaatgagctctatgagctacaggcaagcagatgggaatggaaa
aagttgaaggccaaagcccccaaaaatggtcctccaccatgtgcccgtcttggacattgc
ttttctgtaattgacagtaaatgttatttatttgggggattagccaacgacagtgaagat
ccaaaaaacaatattccgcggtatttaaatgacctgtatatattggaactaaagccagga
tcgggagttgtgggatgggacataccagtcacccatggcacaccaccaccacccagagag
tctcacactgcagtcgtgtatcgcaacaaagagaaaaaaccaaagcttgtcatctatggt
ggaatgagtggctgtcgacttggagatctgtggatactggatattgagagcttaacgtgg
aacaaaccagaagttgctggagttccaccactgccccgaagtctacattctgccacgatg
attgggagcaaaatgtatgtttttggtggctgggtcccccttgtgctggaagatgtcaaa
gctcccacgcatgagaaggagtggaaatgcacaaatactctggcatgtctggatctggaa
acaatgacttggactcagatctccacagaatcatttgaagatagtattcctcgtgcaaga
gctggtcactgttcagtttccataagtacacggctgtacgtgtggagtggacgagatggc
tacaggaaagcttggaacaatcaagtctgttgtaaagacctgtggtatcttgaaacagaa
aagccgcctgctcctggcaaagtccaactggttcgagcaagtaccaactcacttgaggtc
agctgggggttggtctccactgccgacagctacttgcttcagcttcagaaatacgatgtt
ccaacggtcaccgctgctgttactcctttgccaagctctgcagttgcgggcatccggcca
gcctgtagtcccgctcctgcggcagcagcatcagtatcaccttctccagtacaatcagga
gtccgttttgttacacagacgacccctgctgtgggaacaccggctgcatccctaaccacc
agtgcaacatcgccttctgtagtccggattcccatggctgcagcttctccacgtggtcca
gcctcaccgatgatcagagccacaacagggcagccagtggttgcgtcagcagcttcagca
gcacctctcatcactgtacaacggcaagctgcacctcagggcaaaacacccaatactgtg
gcaacccttccaccaggtgttcgcatggtgatgccagcacagactacagcagggactgca
ctcacttccagcccacagatgagtggaatggcagctttagctgcagcagctgctgctact
cagaagattccttccagcacggcagttacctcagttggacttcatcctagcacaacgctg
gtgaaaacaatcgcagttgctcccggagtcagtaccttggcaaccactgtgaaggtagcc
actccatcagtcatggtcaacacaccggcgacctcaatgttgaagacggctgctgcccag
ttagtgacaccgacccatgctgccacttccactgcttcagctagacccatcatcacagtg
cacaaatcaggaacagtcactgtggctcagcaggcacaagtggtgaccactgtagtaggt
ggggtcacaaaaacaattacactagtcaagagccctatctccatggctggaggaagcacg
ttgatttccaatctgggaaaagtgctcaccctgcaggctaaaccagggcaacaggccacc
atctcaaacccaggctccactgggccacttacacagatcttccagaccaaaggtcaactg
cctccaggagctaccattttgaaacttgttacttcagcagatgggaagcctgccaccatc
atcaccacctcacaggctgggaatgtgggccttaagcagacattcgtcagcctcagcaat
gtgtcacctgcttcttcgaaaccagcgaccaccattctcaaaaccatccctatgtctgca
cttatttcacagcccggaactacgggtgtcacaggaagtcctggtatgaaatccccaatt
accatcatcactacaaaagtaatgacctccggaactggaacaccaacaaaattcatcact
gctgtacccaaactgcagacagggcaacagggacttacccaggtgttgctgaaaggtgct
gcaggacagcctggcactatcctgcgaacattatctgggacaccagttactggagtcaga
ctgatcactccagtaactgtatctgccgccaaaccagcacttacaactttggtagtgaag
gggaccacaggtgcaagtacattggggacgatagcaggtacaacacttgcaggagtgtcc
accgtttcaccaacactcaacactcccattgccactcttggtaccattgccaaccttacg
ggccagataatcagtgcttcccctaacaccactcagaaacttactgctgtaactggagct
acttcccccatcatcaccattcagcctgtgtctgagccaaaccgtgtcacgattgtcgcc
tcccctggtggcatggttgcacaacaagcacagcagcttgtaaattcaggatcagctttg
gtggcggcacctcgagttgctactgtgaattcagaaactcagacccacagacttgagttt
gttgaaatgccagtcagatgttcaaatcctccccatgagacgtcagaaaccaacaccacc
aacacatctacaactaccacagcaaacattgcagcaaaccaagtccagccacctgccatg
aatgcacaaggtattcctgaaagtgtgcatggtgaaacagcaacagcaggaacaacaaac
actgcaaccactgcatctacagcacagagtggggcagttaccatggtaacacagtccaca
cctgcccctggaccttccacacaggcaatcccatcaactgaaggacagtctaatagcatt
gagcaaggttctgtgtctacaatgggacagaatgttgtacagattctgcctgctagctcc
actggtgttggtgccacaatagcggttagggtctccagtacaaaccaagaaacagcagcg
gccttgaatcctcaacctagagtcaggttgcagcaagatcagctcctccctccgcgagag
ctgctggctgatagccggccagagacccttgctgaactgggactgtctcctgaggagctg
gctgtagcagctgccgctgaggaagcagcccgtttcgcagcactggaggaagaagcgaag
gcaacaacagcgacacaaacatctctggtctctaaaggggctgcccctgcagcaaggcaa
gagaccatggatacctcaacagcagaattaacaacaatacaaccagcacagctgtcgcac
caagcactgcagacactggtgtctcttcagtctattgtaccattggctgaacttgcacag
caggacatagaaagagcacaccagcaacaagcagcagaaagcaaccagccctcccgacca
gcagaggcgctagctccagcagacagtctcaatgattctacctctgagaccaatgggcca
caggaactacctagtacagtttcaagtgttcagttacctattctgaagaccacaggattg
acaccatacacttctctcctgacatctacaaccaaccaaaactctagtccaattaaaacg
caggccgccacaactttagcccaagtagccaatggaattggcctacctgcttcgaaacag
gatgcgtctcctaatacccagccaaaaccaacagccaggaaggaacccaatcagtggtat
gacgtcggtgtattcaaaacgctgagcacagtagtggtttcctacttcctgcctgcagag
ggctctcaaggagaagaggatggcagtggggataacatccctgaccacagcaatctaaag
actgagagactggaatcgggcactgcttataaattccgagttgctggtataaatgcttgt
ggacggggtccattcagtgaagtctcagcttttaaaacctgcatgccaggattcccaggt
gcaccatctgccatcaagatcagcaaggttgctgaaggtgcacagctctcctgggaacct
cctgctgttacttctggcaccatcattgaatactccgtgtatctggcactaccagggtca
caggcagcagatcccaaacctgcagggacttcccatctgctcttcgtccgtgtttactgt
ggacctgtacccagctgtcttgtgtcttcatcaaacctagcaaatgcacacatcgataca
accacaaagcctgctataatctttaggatagcagccaagaatgagaagggctatgggcca
gccacccaggtcaggtggctgcaagatataagcaaagatggagcaagacctgcaactaag
cgatctgttgcatcctctgatgacaagctaataagcgtgaataagaagccaagaggagat
gggtcctaa

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