Chiloscyllium punctatum (brownbanded bambooshark): 140483623
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Entry
140483623 CDS
T11285
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140483623 (traip)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140483623 (traip)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140483623 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-RING_Vps41
zf-C3HC4_3
zf-ANAPC11
Filament
zf-C3HC4_4
CCDC22_CC
WEMBL
HMMR_N
zf-RING-like
zf-RING_16
RINGv
GAS
zf_RING_Vps8
RING_XB3-XBAT31
COG4_N
MAD
FANCL_C
zf_RING_Vps8_fungal
zf-Nse
HIP1_clath_bdg
DUF3450
Motif
Other DBs
NCBI-GeneID:
140483623
NCBI-ProteinID:
XP_072438012
LinkDB
All DBs
Position
12:complement(15124609..15168785)
Genome browser
AA seq
454 aa
AA seq
DB search
MPIRAHCTICADYFDNFRDVAAIYCGHTFHNECLAQWFHSAPSRTCPQCRIKVSTKHIIN
KLFFNIGESEQVLDAETLQNELDRVKSQLLQKEKEKIDRQSIIDKLRDTLDERNTRLESL
SKELNETEMLCSTLKKQVRYLEQQQDDSKSSKEEARRLRQKLQTLENIQVLLQSQRPEVE
EMIREIGIGQSAVEQLSIYCVSLKKEYENLKETFKTSVDMSEKLKREHFITTCKLERNVS
QLEKTKEELRASQEDLRNADREITNLKKKVEFLQKSLSTPNRTNEAISRLIFESPAPVDL
QYPKLHKPAVGEDIDLSLTYDFDTPDHVPPKPLSTSLKKIKLDTAGLPRLNQSTKSVDKS
KKMNNDEDDHILPAFLKNSMLFQKKPCGSFLNPHTNQGSVRTGFDGMGGRTKFIEPTKMT
EIRPLPLKAKRKKVSRTAVKPSICKQHKLEDFLI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgccaatccgcgcccactgcacaatttgtgctgattactttgataatttcagggatgtg
gcagccatctattgtgggcacacgtttcacaatgagtgtctcgctcagtggtttcacagt
gctccatctcggacctgtcctcagtgtagaataaaggtcagtacaaaacacatcatcaac
aagctgttcttcaacataggtgagagcgagcaggtgttagatgctgaaactctccagaat
gaattggacagagtcaagtctcagctgttacagaaagagaaagagaagatagaccggcaa
tcaatcattgataaactgagggacacactggatgaacgcaacacaagactagaatctttg
agcaaggaactgaatgaaacagaaatgctgtgctcgactctcaagaagcaggtgcgatat
ctggaacagcagcaggatgattccaaatcttcaaaagaggaggcacgcaggctgcgacag
aaattgcaaacattggaaaatattcaggtgctgcttcaaagccagaggccagaagttgag
gaaatgatccgggaaataggaataggacagtccgcagtggagcagctgtccatttattgt
gtatccttaaaaaaggaatatgaaaacctgaaggagacatttaaaacttccgttgatatg
tctgagaagctgaaaagagaacattttataaccacctgtaagttggagagaaatgtgtca
cagttggagaaaacgaaagaggagctgcgtgcatcacaggaggatctgcgcaatgctgac
agagagatcacgaacctaaagaagaaggtggagttcctccagaagtccctcagtacgcca
aaccgcaccaacgaggcaatcagtcgcttaatcttcgagagccctgctcccgtggattta
caataccctaaactgcacaagccagctgttggagaggatattgatctgtctctgacatat
gactttgatacccctgatcatgttcctccaaaacctctcagtacttcgttgaagaaaata
aaactggatacagctgggttaccaaggttaaatcagtctactaaatcagtggacaaatca
aagaaaatgaacaatgatgaggatgatcatattctcccagcattcctcaaaaactcaatg
ctcttccaaaaaaaaccttgtggcagcttcttgaatccacacacgaaccaaggatcagtg
cggactggcttcgatggaatggggggaagaactaagtttatcgaacctaccaaaatgact
gaaattcgaccactgccattaaaggcaaagaggaagaaggtgtctcggacagctgtcaag
ccctctatttgcaagcagcacaagttggaggatttcctgatttga
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