Chiloscyllium punctatum (brownbanded bambooshark): 140483851
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Entry
140483851 CDS
T11285
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140483851 (shq1)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
140483851 (shq1)
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
HTH_20
Motif
Other DBs
NCBI-GeneID:
140483851
NCBI-ProteinID:
XP_072438686
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Position
12:complement(51715561..51852338)
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AA seq
643 aa
AA seq
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MITPAFELSQDPNFLTIIIQVPYAKVNEVDLYIDGVDFKFYAKPYFLRLTLPGKIVEDGR
ETALYNADAGSFTIKVPKETPEEYFEGLDMLTVLLAPKGSRSAKPLLEEIGQTVDIEEDE
DQQEFDWEIEQTPYVELEGNVLSQTCFYGFGNLRTGVFRRLQDELTDVIDLEEPDSTTMV
ERRQKRLAAEEAKFDSDHYLADLFEDDTIQDLLKYKPWWAGMPKRKEARKTQSEQHLMEE
TESRFVEFSEDEKEHLRNFTNKNYLLDKKACHNAYLCLLDIILAYAYEVRITEGETNTES
SWNIRKLSGTLCWLDTYHSLQEVAVSFCRRVLCYPFYRHFHLALKAIEDAVLILQLGKSA
VLKSLLGIHKIFRESDPAYLLNDLYITDYCIWIQKVKCRTYRAFWGFLLVNLFRSKKLAS
LAETLRNVKITKSNLSFELEELEKAALLVQEEENEIKPGQSGLQSPLSESDTQEDNDSEE
SSSSSYDTGESDSCENDLSSCSISEEMDRKCLCHATEADCVTEFKAKEDLIKLNCGDETM
HMDATGYPVNCPLGETSTDKSPPRRLIEEVADQLQSMGFSEHCEKSAVENSEHRPTSLPV
QNLAQYQHSQTTSQQTFLEVSPKRNCLLLVADPDNTEDFINLA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacctgcctttgaattgagtcaagatcctaatttccttactatcataatccaa
gtcccatatgcgaaggttaatgaagttgatctgtacatcgatggagtggacttcaaattt
tatgcgaagccatacttcttaagattgactcttccaggaaagatagtggaggatggcaga
gagacagctttgtacaatgctgatgcaggaagttttacaataaaggttccgaaagagacg
cctgaagaatactttgaggggttggatatgctgactgtgcttctggcaccgaaaggttca
cgatctgcaaagccattgctggaagagataggacaaactgttgacattgaagaagacgaa
gatcagcaagaatttgattgggaaattgagcaaactccctatgtggaattggaaggaaat
gttctaagccagacttgtttctacggctttggaaacctgagaactggagtcttcaggaga
ctgcaggatgaactcactgatgtgattgacctggaggaaccagacagcactacaatggtt
gaacgtcggcagaaacggttagctgctgaagaggccaagtttgattccgatcattatctt
gctgacttatttgaggatgacaccattcaggacttgctgaagtataaaccttggtgggca
ggcatgccaaagagaaaagaagcaaggaaaacccagagtgaacaacatttgatggaggag
acagaaagtcgatttgttgaattttctgaagatgaaaaggaacacttgcgaaacttcacc
aataagaattacctgctggataaaaaagcatgccacaatgcttacctctgcctgcttgac
attatccttgcatatgcctatgaagtccgcatcactgaaggagaaaccaatactgaatcc
tcgtggaacatccggaaactgagtgggacactgtgttggctggatacttaccattctctt
caagaagttgctgtgtccttctgcagaagagttttgtgttatcccttttacagacatttc
cacttagctctgaaagctattgaggatgcagtcttaatacttcagctgggtaagtctgct
gttctgaagtccctgctgggcatccataagatcttcagagagagtgaccctgcatatctt
ttgaatgacctctacatcacagactactgcatttggatccagaaagtgaaatgccgcacg
tatcgagcattttggggttttcttttggtcaacttattcaggtcaaagaagcttgcatcc
ttggctgagacactgcggaatgtaaaaatcacaaagagtaatttaagctttgaactggaa
gaattggagaaagcagcgctattagttcaagaggaagaaaatgaaatcaagccagggcag
agtggtctccaatcacccctgtcagaaagtgacactcaggaagataatgactcagaggaa
tcgagtagctcatcctatgatactggagagtctgattcatgtgaaaatgatttgtcgagc
tgtagcatttctgaggaaatggatagaaaatgtttgtgtcatgcaacagaggctgactgt
gtcactgaattcaaagctaaagaggatttgatcaaattgaactgtggtgatgaaactatg
catatggatgccacaggatatccagttaactgtccattgggagagacttccactgataaa
tcacctccaagaagattgatagaagaagttgcagatcagttacagtcaatggggttttca
gagcactgtgaaaaatctgctgttgagaattcggagcacagaccaacaagcctgcctgtt
cagaatttggcacagtatcagcattcacagacgacctcacagcagaccttcttagaggtg
tctcctaagaggaattgcctgctgcttgttgcagatcctgataacacagaggattttata
aacctggcatga
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