Chiloscyllium punctatum (brownbanded bambooshark): 140484572
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Entry
140484572 CDS
T11285
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140484572 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpun04990
]
140484572 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
cpun04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
140484572 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
DUF6479
Motif
Other DBs
NCBI-GeneID:
140484572
NCBI-ProteinID:
XP_072439105
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Position
13:81171781..81269276
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AA seq
393 aa
AA seq
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MSQFRINLLGPAPWGFRLVGGKDFDQPLTISRITPGSKAEAAGLCIGDAILSINGENTDG
LTHLDAQSKIKGCIDELTFLIARSESKIWSPLSNEEGKQHAYKMNLASEQQRPAQLQRTY
SLVNPPVKRSPGVSSPASASGIFKAPIATVYAPSPSCSPSALFRRHSTSSIPSRLRVGPE
ELKQAAQYCAVGPVEVDVPGLRVLHTQFNSPLQLYSQQNIVDSLQGQISTLSPSAISFEP
AKQPCRPTVDTESDVYKMLQENQEPEELPRQSASFRVLQEILESEGNEQPDKPSGFRKVK
APATKVGTSVGSGQKLPVCEACGSGIVGMIVKVRDQFRHPECYTCADCGTTLKQKGHFFI
GDKIYCEQHAKERTTVPEGYDVVTVFPKSQATI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtttcggatcaatctgctcggaccagccccctggggattcaggctggtcgga
gggaaggactttgatcaaccgctgaccatctccaggataactccagggagcaaggctgag
gctgctggactctgtattggcgatgcgattttgtccattaacggtgaaaataccgatggg
ctgactcacctggatgctcagagcaagataaagggatgcatagatgaactgactttccta
attgccaggtctgaatccaaaatctggtcacctctatcgaatgaggaaggaaagcaacat
gcatataagatgaacttggcatctgaacagcagagaccagctcaattgcagcgcacatac
agcctggtaaacccacccgttaaacgatcgccgggtgtaagcagtccagcgtctgctagt
ggaatctttaaagctcccattgctacagtctatgctccttctccctcttgctctccatca
gctttattcaggaggcatagcacctcctccatccccagccggctcagggttggacccgag
gagttgaagcaagcagcccagtactgcgcagtgggtccagtggaggtggatgtaccaggg
ctgcgagtgctgcacactcagtttaactctcctctgcaactttattctcaacaaaacatt
gtggacagtttgcagggacagatctcaacactaagcccttccgcaatcagtttcgaacca
gcgaagcagccgtgcagacccaccgtggatacggagtctgacgtttacaaaatgctgcaa
gagaaccaggagccggaggagctgcccagacagtcagcctcattccgtgtgctgcaggag
atcctggagtctgaaggcaatgaacagccggataaaccgtctggattccgcaaagtgaaa
gccccagccacgaaggttggtacctcggttggcagtgggcagaagttgcctgtgtgtgag
gcctgtggctccggaatagtggggatgattgtgaaagtccgtgaccagttccgtcaccct
gagtgctacacttgcgctgactgtggaacaaccttgaagcagaaaggacattttttcatc
ggagacaagatctactgtgaacagcacgccaaggagcggaccaccgtccctgagggctac
gatgttgtcacggtcttccccaagtcacaagccacgatctga
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