Chiloscyllium punctatum (brownbanded bambooshark): 140484626
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Entry
140484626 CDS
T11285
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140484626 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140484626 (skic3)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
140484626 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_16
TPR_11
TPR_12
TPR_17
TPR_7
PPTA
ANAPC3
TPR_30
ARM_TT21_C
HAT_Syf1_M
ARM_TT21
TPR_Slam
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
140484626
NCBI-ProteinID:
XP_072439260
LinkDB
All DBs
Position
2:complement(61001329..61126463)
Genome browser
AA seq
1564 aa
AA seq
DB search
MSNKEVKATLKNAREAIRNKEFKEALKHCKAVLKQDKNNYNAWVFIGVAAAELEQPDQAK
TAYKKATELDPDQLLAWQGLLNLCEKNDTSDNKHELLGIYQKLMKLYESSDKQKWHEVCL
KLVDLYHQEKNYLEVAKTWSRLIQLKQHDGASKQELHQMWRKMIQLLADKVESQDNETQQ
LLIIAFENVLASMDKIPSDSHQKLSTDYVKFLSKLPHEGNKLKLACETLITQYPDSSSSL
EVLAMHFIQTECFSEEALQCYSRLNKTVPTNGLGLIGVGIKAMQEKKYEEAAKNLTKGLK
QAHSATIAWFYLAEIQFRMHKYEATISSCRSGLALLESSGHYGNAQQKHKLLHLQADAMI
KSGDASNAEKAFDILEQLPGSNEPTLLALKGQACLNKGLMKQASQIATDLVASCPDVAET
WELQGLVSYTQKDYIQAEQSFQKALKLKAECGIYYYYLGLTYWFMGEVMRKDKSKTATHL
LKAAKLDTYNGRTFCYLGHYYHDIVQDKNRARGCYKKAFELNKSDEEAGAAAVDLSVELG
DMETALTILRTVTDQSSAGTAKWAWLRRGLYYMRINQSSSAVADLQAALRADLKDSNCWE
CLGEAYLSRGGYTAALKAFTKASELNPNSVYNIYKIAAIKQIIGKYAEAVTEYKQIIQNS
KKYVPALKGLGECYLMMTRSALDDCLDGRALDSAEEALQYLARAVQCRPDVSCLWKLIGD
TCTVLHVLSPAKVNIRVSAILIGQDEKRNVHYLDKNELLRLGGRCYGRALTLMSTSANLW
CDLGVNYYRQAQATAEGNIVSELLEKALLCLKKSVMLDSKNHLHWNALGVVACYKGIANY
ALAQHAFIKSVQVEQNNVVAWTNLGATYLKNENIELAHEAFKVAQSLEPSYVICWIGQAL
IAEAVGSYETMDLFRHTTELGVNTEGAKGYAHWVCSTLQDKSNRNSELYKYNIVQMNAIS
AAQVVMSKYTERIQSDATAFTMLGYLNEYLNLKEQAEVAYHRAFLLLQNTEDEEKLKYAQ
RNWMRALCAAGQYREAIETYMLNPFVEFDDIISLALVYLKKGLLQESAKAYEKALTIART
ENEKAHIMIALAMIAFKEGRIDNAKTLLFKCSMLKEPSVESLQALCALGLSKKDTTLTTA
ALNELFKHSDKINSTYETCLLSSGMFSLQANSLAVQRQAAKAVHSNPADPALWTLLSRLV
PQHTPQMAEGGVVAGNIAEILSSHQTKNALLFSAANQLAAGKGTAANEQNNALKTIQKAV
HLYPDDPAVWASLMAACHMEKTLSHLENTKPKRTTLEEMFVTTITTKVEAEKTMPTPYLQ
SIENWSLQQAATGLKEEGRHSEAEAFCTKVLKRHPDHPMVFLLLRQVQCEQLLLSQQRLP
DPVLEELKKAVMSNFTSVTAWHWLAEVYKSQGLMIAAEMCYRQGLQLSSQHGNMNGKLSS
LLRLALLALSLSTIKLQNNRWTSLVREATSEAQKISLCPLAGLFQALLQFIVKMGARETR
RLLERVVYQPGYTESIASVGRWYLLRHLWAKNDDELITVLLQNGKMNGDSRVEELHKKLI
EASL
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagttaaggccaccttgaaaaatgcaagggaagctataagaaataag
gaatttaaagaggcattgaaacattgcaaggctgtgttgaaacaagacaagaataactac
aatgcctgggttttcattggagttgctgcagcagagttggaacagccagaccaggcaaag
actgcatataaaaaagccacagaacttgatccagaccagttgttggcatggcaggggttg
ctaaatctttgtgagaagaacgatacatctgacaacaagcatgagctgttgggaatttat
cagaagctaatgaagttatatgaaagttcagacaaacagaaatggcatgaagtctgctta
aaattagttgatctctaccatcaagaaaagaattatctggaggtcgccaaaacatggagt
cgcttgatacagctaaaacaacatgatggagctagtaaacaagagctccatcagatgtgg
aggaagatgatccagttacttgctgacaaagtagagagtcaggataatgaaacccaacag
ctgttgataatagcttttgaaaatgtccttgcttcaatggacaagattccaagtgatagc
catcagaagctttccactgattatgttaaatttctatcaaaactgccacatgaaggaaat
aagctaaaactagcatgtgaaactttgataacccagtatcctgattcttcttcttcactc
gaagtacttgccatgcattttatccagacagagtgctttagtgaagaagctttgcaatgt
tattcaagacttaataaaactgtaccaacaaatgggctaggtcttattggagttggaatt
aaagctatgcaagaaaagaaatatgaagaagctgcaaagaacttaactaaaggattaaag
caggcacattcagcaactatagcatggttttacctagcagagatccagttccggatgcac
aaatatgaagcaacaattagctcctgcagaagtggtttggcgctgttggaaagcagtggc
cattatgggaatgcacagcaaaaacacaagttgcttcatttacaagcagatgcaatgatc
aaatctggtgatgcaagtaatgcagagaaagcctttgatatcttggaacagcttcctggc
tccaatgaaccaacactacttgccttgaaaggacaagcttgtttgaacaagggtctgatg
aagcaagcatctcagattgcaacagatcttgtggcttcttgtcctgatgtggcagaaaca
tgggaactccagggccttgttagttatacccagaaagattatattcaagcagaacaaagt
ttccagaaagctctgaaattgaaagcagagtgtggaatatattactactaccttggacta
acttactggttcatgggggaggtgatgagaaaggacaagtctaaaactgctacacatttg
ttaaaggctgccaagttggacacatacaatggacgaacattctgctacttaggccactac
tatcatgacatcgtacaagataaaaaccgagctcgtggttgctacaaaaaagcctttgag
ctaaataagagtgatgaagaagcaggagcagctgctgttgatctcagcgttgaacttgga
gatatggagactgctcttacaattctgaggacagtgactgatcagtcaagtgctggaaca
gccaaatgggcttggcttagacgaggactttattacatgagaatcaaccagagttcatcg
gctgtggcagatttacaagcagccttgagagcagacctgaaagattcaaattgctgggaa
tgtttaggagaagcttatctcagtagaggaggttacactgctgccttaaaggctttcact
aaagccagtgaactgaatccaaactctgtatacaacatttacaagattgcagctattaaa
cagattattggcaagtatgcggaagcagttacagagtataaacaaataattcagaattca
aagaagtatgtccctgccctcaaaggcctaggtgaatgctatttaatgatgacacgaagt
gcccttgatgattgtttagatggaagggctttggattcagcagaagaagcacttcagtac
ttagctagagctgtacagtgtcgacctgatgtatcctgtctatggaagctaattggagat
acatgcaccgtgctccacgttttgtcaccagcaaaagttaacattagagtctctgccatt
ctcattggacaggatgaaaagagaaatgtgcattatttagataaaaatgaactgctccga
ctaggaggaagatgctacggacgggcccttacattgatgtcgacatctgccaatctgtgg
tgtgaccttggtgtgaactactaccgacaggctcaggctactgcagaagggaatatagtg
tctgagttattggaaaaagcactactgtgcctcaaaaaatctgtgatgttagacagcaaa
aatcatctacactggaatgcacttggagttgttgcatgttataaaggtattgcaaattat
gccctagcccaacatgcattcatcaaatctgttcaggttgaacaaaataatgtagtggcc
tggaccaacctgggggcaacttatttgaagaatgaaaatattgagcttgctcatgaagcc
tttaaggtagcccagtctttggaaccctcgtatgttatatgctggattggacaggcacta
attgctgaagctgttggcagctatgagaccatggatttgtttagacataccacagagctt
ggtgttaatactgagggagctaaaggttatgcacactgggtgtgttcaacactacaggat
aaatcaaacagaaattctgaattgtacaagtacaacattgtacaaatgaatgcaatatct
gctgcgcaagttgtcatgagcaaatatacagagagaattcagagtgatgcaacagctttc
acaatgctgggttatttaaatgagtatctaaacctcaaagaacaagcagaagtggcatat
cacagagcatttttgctgctccagaatactgaagatgaagaaaagcttaagtatgcacag
agaaattggatgcgagctttatgtgctgcaggtcagtaccgggaggccattgagacttac
atgttgaacccttttgtggagtttgatgacataattagtcttgctctggtttacttgaag
aaagggcttcttcaggaaagtgccaaagcttatgaaaaggctttaactattgcccgtacg
gagaacgagaaggcacacataatgattgcacttgcaatgattgctttcaaagagggtaga
atagataatgccaagactttactcttcaaatgttccatgctgaaggagcccagtgtagaa
agtctgcaggctttatgtgctctgggtctgtcgaagaaggataccaccctcactacagca
gcacttaatgaactgttcaaacattcagataaaatcaactcaacctatgaaacctgcctt
ctttcttcagggatgttttctttgcaagcaaacagtttagctgtgcagagacaagcagct
aaagctgtccatagcaatccagctgatcctgccctttggacattattatccagacttgtt
ccacaacatactccccagatggcagaaggtggagtagttgctggcaatattgcagagatt
ttaagttcccatcagacaaagaatgcacttttgttcagtgctgcaaatcagttggcagct
ggcaaaggtacagcagccaatgaacaaaataatgcattaaaaactattcaaaaggcagtc
catctgtatccagatgatcctgctgtttgggccagtttaatggcagcctgtcacatggaa
aaaacattatcacatttagaaaatacaaaaccaaaacgtactacattagaagagatgttt
gtcacaacaatcaccaccaaagttgaagcagagaagaccatgccaactccttatcttcaa
tccatagagaactggtctctgcaacaggctgcaactggattaaaagaagagggcaggcac
tctgaagctgaagccttttgcactaaagttctgaagaggcacccagaccatcccatggtg
ttcctgttgctgagacaggttcaatgtgaacagctgttactttcacagcaacggcttcca
gatccagttttagaagaactgaaaaaggcagtgatgtcaaatttcacttcggtgacagct
tggcattggctggcagaagtatataaatctcagggtttaatgatagcagcggaaatgtgt
tacaggcaaggactgcaactatcttcacagcacggcaatatgaatggcaaactgtcaagt
ctactcagattagcattgcttgccctctctctcagtacgattaaacttcagaacaatcga
tggacatcattagtcagagaagcaaccagtgaagctcaaaagatctctctttgtcctctt
gctggtctattccaagcactcctgcaatttatagttaaaatgggagcaagggaaacacga
cggctgctggagagagtggtatatcagccaggttacacagagagcattgcatcggttggc
cgttggtacctcttacgacatctgtgggccaaaaatgatgatgaacttatcacagtatta
cttcaaaatggcaaaatgaatggagattctagagttgaagagctgcacaagaagcttatt
gaagcatccttataa
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integrated database retrieval system
